RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 C1orf53Q5VUE5 145 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 FAM91A1Q658Y4 838 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 RFWD3Q6PCD5 774 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 WDR75Q8IWA0 830 aaKnown RBP15.12■□□□□ 0.01
CBX3-202ENST00000396386 SLC39A11Q8N1S5 342 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 CFAP52Q8N1V2 620 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 C2CD4AQ8NCU7 369 aaPredicted RBP15.12■□□□□ 0.01
CBX3-202ENST00000396386 ZNF461Q8TAF7 563 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 CALML6Q8TD86 181 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 TMEM169Q96HH4 297 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 MAGEH1Q9H213 219 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 CYP4F11Q9HBI6 524 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 UXTQ9UBK9 157 aaPredicted RBP15.12■□□□□ 0.01
CBX3-202ENST00000396386 LNPEPQ9UIQ6 1025 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 ATP11BQ9Y2G3 1177 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 FAM95CA0A1B0GW59 222 aa15.11■□□□□ 0.01
CBX3-202ENST00000396386 FCHO1O14526 889 aa15.11■□□□□ 0.01
CBX3-202ENST00000396386 H2AFYO75367 372 aaKnown RBP15.11■□□□□ 0.01
CBX3-202ENST00000396386 LYPLA1O75608 230 aaPredicted RBP15.11■□□□□ 0.01
CBX3-202ENST00000396386 PAPSS2O95340 614 aaPredicted RBP15.11■□□□□ 0.01
CBX3-202ENST00000396386 AHSGP02765 367 aa15.11■□□□□ 0.01
CBX3-202ENST00000396386 DNAJB1P25685 340 aa15.11■□□□□ 0.01
CBX3-202ENST00000396386 GABRB3P28472 473 aa15.11■□□□□ 0.01
CBX3-202ENST00000396386 ALDH1A3P47895 512 aa15.11■□□□□ 0.01
CBX3-202ENST00000396386 CD151P48509 253 aa15.11■□□□□ 0.01
CBX3-202ENST00000396386 GNA12Q03113 381 aa15.11■□□□□ 0.01
CBX3-202ENST00000396386 CTBP1Q13363 440 aa15.11■□□□□ 0.01
CBX3-202ENST00000396386 PLD1Q13393 1074 aa15.11■□□□□ 0.01
CBX3-202ENST00000396386 TAF12Q16514 161 aa15.11■□□□□ 0.01
CBX3-202ENST00000396386 SIRPB2Q5JXA9 342 aa15.11■□□□□ 0.01
CBX3-202ENST00000396386 KIAA0408Q6ZU52 694 aa15.11■□□□□ 0.01
CBX3-202ENST00000396386 SLC41A1Q8IVJ1 513 aa15.11■□□□□ 0.01
CBX3-202ENST00000396386 BBS5Q8N3I7 341 aa15.11■□□□□ 0.01
CBX3-202ENST00000396386 RDH11Q8TC12 318 aa15.11■□□□□ 0.01
CBX3-202ENST00000396386 PIWIL2Q8TC59 973 aaKnown RBP15.11■□□□□ 0.01
CBX3-202ENST00000396386 TRMT2BQ96GJ1 504 aaKnown RBP15.11■□□□□ 0.01
CBX3-202ENST00000396386 MYRFLQ96LU7 910 aa15.11■□□□□ 0.01
CBX3-202ENST00000396386 SEMA3CQ99985 751 aa15.11■□□□□ 0.01
CBX3-202ENST00000396386 CRISPLD2Q9H0B8 497 aa15.11■□□□□ 0.01
CBX3-202ENST00000396386 NMRAL1Q9HBL8 299 aa15.11■□□□□ 0.01
CBX3-202ENST00000396386 DNAJC16Q9Y2G8 782 aa15.11■□□□□ 0.01
CBX3-202ENST00000396386 ZFP37Q9Y6Q3 630 aaPredicted RBP15.11■□□□□ 0.01
CBX3-202ENST00000396386 TRAFD1O14545 582 aaPredicted RBP15.1■□□□□ 0.01
CBX3-202ENST00000396386 PHGDHO43175 533 aaKnown RBP15.1■□□□□ 0.01
CBX3-202ENST00000396386 ITM2AO43736 263 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 ATP6V1G2O95670 118 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 COL6A2P12110 1019 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 SAT1P21673 171 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 HOXD9P28356 352 aaPredicted RBP15.1■□□□□ 0.01
CBX3-202ENST00000396386 CORO1AP31146 461 aaKnown RBP15.1■□□□□ 0.01
CBX3-202ENST00000396386 ABCE1P61221 599 aaKnown RBP15.1■□□□□ 0.01
CBX3-202ENST00000396386 RIPK1Q13546 671 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 SLC12A1Q13621 1099 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 ITGA9Q13797 1035 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 KRT72Q14CN4 511 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 NEPROQ6NW34 567 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 ALYREFQ86V81 257 aaKnown RBP15.1■□□□□ 0.01
CBX3-202ENST00000396386 DENND1CQ8IV53 801 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.1■□□□□ 0.01
CBX3-202ENST00000396386 SLC7A6OSQ96CW6 309 aaPredicted RBP15.1■□□□□ 0.01
CBX3-202ENST00000396386 FEM1CQ96JP0 617 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 PRICKLE1Q96MT3 831 aaPredicted RBP15.1■□□□□ 0.01
CBX3-202ENST00000396386 FAM96AQ9H5X1 160 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 STN1Q9H668 368 aaKnown RBP15.1■□□□□ 0.01
CBX3-202ENST00000396386 TASP1Q9H6P5 420 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 TMEM39AQ9NV64 488 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 FBXO5Q9UKT4 447 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 STK38LQ9Y2H1 464 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 TMEM114B3SHH9 223 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 G3V2L1 256 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 STC2O76061 302 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 URODP06132 367 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 ATXN1LP0C7T5 689 aaKnown RBP15.1■□□□□ 0.01
CBX3-202ENST00000396386 SLC35E2BP0CK96 405 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 LAG3P18627 525 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 HLA-DPA1P20036 260 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 RAB10P61026 200 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 ALG1LQ6GMV1 187 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 ZNF689Q96CS4 500 aaPredicted RBP15.1■□□□□ 0.01
CBX3-202ENST00000396386 IFT43Q96FT9 208 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 ABHD8Q96I13 439 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 ELMO2Q96JJ3 720 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 BEGAINQ9BUH8 593 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 C1QTNF1Q9BXJ1 281 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 ARL8BQ9NVJ2 186 aa15.1■□□□□ 0.01
CBX3-202ENST00000396386 LOC285095A0A1B0GVY8 99 aa15.09■□□□□ 0.01
CBX3-202ENST00000396386 ABHD14A-ACY1A0A1B0GW23 586 aa15.09■□□□□ 0.01
CBX3-202ENST00000396386 TTC24A2A3L6 582 aaPredicted RBP15.09■□□□□ 0.01
CBX3-202ENST00000396386 CCDC22O60826 627 aa15.09■□□□□ 0.01
CBX3-202ENST00000396386 CLDN11O75508 207 aa15.09■□□□□ 0.01
CBX3-202ENST00000396386 FGF1P05230 155 aa15.09■□□□□ 0.01
CBX3-202ENST00000396386 CLTBP09497 229 aa15.09■□□□□ 0.01
CBX3-202ENST00000396386 STMN1P16949 149 aa15.09■□□□□ 0.01
CBX3-202ENST00000396386 PTPN4P29074 926 aa15.09■□□□□ 0.01
CBX3-202ENST00000396386 CRABP2P29373 138 aa15.09■□□□□ 0.01
CBX3-202ENST00000396386 AVPR1AP37288 418 aa15.09■□□□□ 0.01
CBX3-202ENST00000396386 OXCT1P55809 520 aa15.09■□□□□ 0.01
CBX3-202ENST00000396386 LAMB3Q13751 1172 aa15.09■□□□□ 0.01
CBX3-202ENST00000396386 IHHQ14623 411 aa15.09■□□□□ 0.01
CBX3-202ENST00000396386 SLC14A2Q15849 920 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms