RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 YPEL5P62699 121 aa16.61■□□□□ 0.25
DDR1-229ENST00000396342 MYL5Q02045 173 aa16.61■□□□□ 0.25
DDR1-229ENST00000396342 C1QBPQ07021 282 aaKnown RBP16.61■□□□□ 0.25
DDR1-229ENST00000396342 NR0B2Q15466 257 aa16.61■□□□□ 0.25
DDR1-229ENST00000396342 STX1AQ16623 288 aa16.61■□□□□ 0.25
DDR1-229ENST00000396342 CLEC16AQ2KHT3 1053 aa16.61■□□□□ 0.25
DDR1-229ENST00000396342 INO80DQ53TQ3 878 aaPredicted RBP16.61■□□□□ 0.25
DDR1-229ENST00000396342 BNIPLQ7Z465 357 aa16.61■□□□□ 0.25
DDR1-229ENST00000396342 ZNF248Q8NDW4 579 aa16.61■□□□□ 0.25
DDR1-229ENST00000396342 ZNF548Q8NEK5 533 aaPredicted RBP16.61■□□□□ 0.25
DDR1-229ENST00000396342 SNIP1Q8TAD8 396 aaKnown RBP16.61■□□□□ 0.25
DDR1-229ENST00000396342 NAT6Q93015 286 aa16.61■□□□□ 0.25
DDR1-229ENST00000396342 ZNF578Q96N58 590 aaPredicted RBP16.61■□□□□ 0.25
DDR1-229ENST00000396342 TTYH3Q9C0H2 523 aa16.61■□□□□ 0.25
DDR1-229ENST00000396342 FANCLQ9NW38 375 aa16.61■□□□□ 0.25
DDR1-229ENST00000396342 SALL4Q9UJQ4 1053 aa16.61■□□□□ 0.25
DDR1-229ENST00000396342 ATRXP46100 2492 aa16.6■□□□□ 0.25
DDR1-229ENST00000396342 SIGLEC16A6NMB1 481 aa16.6■□□□□ 0.25
DDR1-229ENST00000396342 TPP1O14773 563 aa16.6■□□□□ 0.25
DDR1-229ENST00000396342 USP12O75317 370 aa16.6■□□□□ 0.25
DDR1-229ENST00000396342 TMCC1O94876 653 aa16.6■□□□□ 0.25
DDR1-229ENST00000396342 CTSEP14091 401 aa16.6■□□□□ 0.25
DDR1-229ENST00000396342 FERP16591 822 aa16.6■□□□□ 0.25
DDR1-229ENST00000396342 RFC1P35251 1148 aaPredicted RBP16.6■□□□□ 0.25
DDR1-229ENST00000396342 ZNF143P52747 638 aaPredicted RBP16.6■□□□□ 0.25
DDR1-229ENST00000396342 COPB1P53618 953 aaKnown RBP16.6■□□□□ 0.25
DDR1-229ENST00000396342 FZD2Q14332 565 aa16.6■□□□□ 0.25
DDR1-229ENST00000396342 TBC1D25Q3MII6 688 aa16.6■□□□□ 0.25
DDR1-229ENST00000396342 CDKAL1Q5VV42 579 aa16.6■□□□□ 0.25
DDR1-229ENST00000396342 LEKR1Q6ZMV7 388 aa16.6■□□□□ 0.25
DDR1-229ENST00000396342 VPS36Q86VN1 386 aa16.6■□□□□ 0.25
DDR1-229ENST00000396342 PHF13Q86YI8 300 aaPredicted RBP16.6■□□□□ 0.25
DDR1-229ENST00000396342 RTL3Q8N8U3 475 aaKnown RBP16.6■□□□□ 0.25
DDR1-229ENST00000396342 IFI44Q8TCB0 444 aa16.6■□□□□ 0.25
DDR1-229ENST00000396342 CNPY3Q9BT09 278 aa16.6■□□□□ 0.25
DDR1-229ENST00000396342 THSD1Q9NS62 852 aa16.6■□□□□ 0.25
DDR1-229ENST00000396342 APOBEC3BQ9UH17 382 aaKnown RBP16.6■□□□□ 0.25
DDR1-229ENST00000396342 ACACAQ13085 2346 aa16.6■□□□□ 0.25
DDR1-229ENST00000396342 COL5A1P20908 1838 aaPredicted RBP16.6■□□□□ 0.25
DDR1-229ENST00000396342 AKAP13Q12802 2813 aa16.6■□□□□ 0.25
DDR1-229ENST00000396342 POM121BA6NF01 834 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 EIF3CLB5ME19 914 aaKnown RBP16.59■□□□□ 0.25
DDR1-229ENST00000396342 CSO75390 466 aaKnown RBP16.59■□□□□ 0.25
DDR1-229ENST00000396342 ZNF821O75541 412 aaPredicted RBP16.59■□□□□ 0.25
DDR1-229ENST00000396342 ALPIP09923 528 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 TNFAIP3P21580 790 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 NFKBIAP25963 317 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 HDAC4P56524 1084 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 JAM2P57087 298 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 TPI1P60174 286 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 GABREP78334 506 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 PPARDQ03181 441 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 CCDC173Q0VFZ6 552 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 CDKN3Q16667 212 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 FILIP1LQ4L180 1135 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 MANEALQ5VSG8 457 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 TRNP1Q6NT89 227 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 DPY19L2P1Q6NXN4 242 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 WDR59Q6PJI9 974 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 NLRP14Q86W24 1093 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 DNAAF5Q86Y56 855 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 FSTL5Q8N475 847 aaPredicted RBP16.59■□□□□ 0.25
DDR1-229ENST00000396342 CCDC185Q8N715 623 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 JOSD2Q8TAC2 188 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 CENPIQ92674 756 aaPredicted RBP16.59■□□□□ 0.25
DDR1-229ENST00000396342 CCDC97Q96F63 343 aaPredicted RBP16.59■□□□□ 0.25
DDR1-229ENST00000396342 BMFQ96LC9 184 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 FCRL3Q96P31 734 aaPredicted RBP16.59■□□□□ 0.25
DDR1-229ENST00000396342 MCEEQ96PE7 176 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 EIF3CQ99613 913 aaKnown RBP16.59■□□□□ 0.25
DDR1-229ENST00000396342 AGPAT1Q99943 283 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 SYNDIG1Q9H7V2 258 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 POLR1BQ9H9Y6 1135 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 UBA2Q9UBT2 640 aaPredicted RBP16.59■□□□□ 0.25
DDR1-229ENST00000396342 ZNF212Q9UDV6 495 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 CFAP47Q6ZTR5 3102 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 ZFYVE26Q68DK2 2539 aa16.59■□□□□ 0.25
DDR1-229ENST00000396342 CAPN8A6NHC0 703 aa16.58■□□□□ 0.24
DDR1-229ENST00000396342 ARHGAP42A6NI28 874 aa16.58■□□□□ 0.24
DDR1-229ENST00000396342 LGALS16A8MUM7 142 aa16.58■□□□□ 0.24
DDR1-229ENST00000396342 NEBLO76041 1014 aa16.58■□□□□ 0.24
DDR1-229ENST00000396342 RNF8O76064 485 aa16.58■□□□□ 0.24
DDR1-229ENST00000396342 UNGP13051 313 aaPredicted RBP16.58■□□□□ 0.24
DDR1-229ENST00000396342 HOXB3P14651 431 aaPredicted RBP16.58■□□□□ 0.24
DDR1-229ENST00000396342 CHRNB2P17787 502 aa16.58■□□□□ 0.24
DDR1-229ENST00000396342 KLK7P49862 253 aa16.58■□□□□ 0.24
DDR1-229ENST00000396342 GSCP56915 257 aaPredicted RBP16.58■□□□□ 0.24
DDR1-229ENST00000396342 C19orf57Q0VDD7 668 aa16.58■□□□□ 0.24
DDR1-229ENST00000396342 ELOCQ15369 112 aa16.58■□□□□ 0.24
DDR1-229ENST00000396342 DEFB133Q30KQ1 61 aa16.58■□□□□ 0.24
DDR1-229ENST00000396342 SOWAHCQ53LP3 525 aaPredicted RBP16.58■□□□□ 0.24
DDR1-229ENST00000396342 PRRT3Q5FWE3 981 aa16.58■□□□□ 0.24
DDR1-229ENST00000396342 ATXN7L2Q5T6C5 722 aaPredicted RBP16.58■□□□□ 0.24
DDR1-229ENST00000396342 RBM44Q6ZP01 1051 aaKnown RBP16.58■□□□□ 0.24
DDR1-229ENST00000396342 EFL1Q7Z2Z2 1120 aaKnown RBP16.58■□□□□ 0.24
DDR1-229ENST00000396342 GPR155Q7Z3F1 870 aa16.58■□□□□ 0.24
DDR1-229ENST00000396342 SLC22A18ASQ8N1D0 253 aa16.58■□□□□ 0.24
DDR1-229ENST00000396342 HCAR2Q8TDS4 363 aa16.58■□□□□ 0.24
DDR1-229ENST00000396342 TBATAQ96M53 351 aa16.58■□□□□ 0.24
DDR1-229ENST00000396342 PARVAQ9NVD7 372 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms