RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 RPS21P63220 83 aaKnown RBP16.41■□□□□ 0.22
CXCL12-206ENST00000395795 CCDC15Q0P6D6 951 aa16.41■□□□□ 0.22
CXCL12-206ENST00000395795 FZD2Q14332 565 aa16.41■□□□□ 0.22
CXCL12-206ENST00000395795 INO80DQ53TQ3 878 aaPredicted RBP16.41■□□□□ 0.22
CXCL12-206ENST00000395795 HGSNATQ68CP4 663 aa16.41■□□□□ 0.22
CXCL12-206ENST00000395795 KYAT3Q6YP21 454 aaKnown RBP16.41■□□□□ 0.22
CXCL12-206ENST00000395795 Q6ZSR6 202 aa16.41■□□□□ 0.22
CXCL12-206ENST00000395795 ARHGAP12Q8IWW6 846 aa16.41■□□□□ 0.22
CXCL12-206ENST00000395795 ASB12Q8WXK4 309 aa16.41■□□□□ 0.22
CXCL12-206ENST00000395795 CENPTQ96BT3 561 aa16.41■□□□□ 0.22
CXCL12-206ENST00000395795 NSMCE3Q96MG7 304 aa16.41■□□□□ 0.22
CXCL12-206ENST00000395795 KLHL32Q96NJ5 620 aa16.41■□□□□ 0.22
CXCL12-206ENST00000395795 LENG8Q96PV6 779 aaPredicted RBP16.41■□□□□ 0.22
CXCL12-206ENST00000395795 NAT10Q9H0A0 1025 aaKnown RBP16.41■□□□□ 0.22
CXCL12-206ENST00000395795 PNMA8BQ9ULN7 279 aaPredicted RBP16.41■□□□□ 0.22
CXCL12-206ENST00000395795 FAM208BQ5VWN6 2430 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 ZSCAN5CA6NGD5 496 aaPredicted RBP16.4■□□□□ 0.22
CXCL12-206ENST00000395795 J3KR12 359 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 KRIT1O00522 736 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 BUB1O43683 1085 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 RFPL3O75679 317 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 FTLP02792 175 aaPredicted RBP16.4■□□□□ 0.22
CXCL12-206ENST00000395795 C1SP09871 688 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 GZMAP12544 262 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 SKILP12757 684 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 TIMP2P16035 220 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 PFN3P60673 137 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 SNRPD1P62314 119 aaKnown RBP16.4■□□□□ 0.22
CXCL12-206ENST00000395795 ASIC2Q16515 512 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 PARP15Q460N3 678 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 CCDC157Q569K6 752 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 LRRC73Q5JTD7 316 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 DCUN1D2Q6PH85 259 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 TMPRSS12Q86WS5 348 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 TP53INP2Q8IXH6 220 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 GALNT15Q8N3T1 639 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 NPWQ8N729 165 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 FNIP1Q8TF40 1166 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 RAB7BQ96AH8 199 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 FEM1CQ96JP0 617 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 KCTD15Q96SI1 283 aaPredicted RBP16.4■□□□□ 0.22
CXCL12-206ENST00000395795 EPAS1Q99814 870 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 SNRNP25Q9BV90 132 aaKnown RBP16.4■□□□□ 0.22
CXCL12-206ENST00000395795 PARVAQ9NVD7 372 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 AP4E1Q9UPM8 1137 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 GPSM3Q9Y4H4 160 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 LAMA5O15230 3695 aa16.4■□□□□ 0.22
CXCL12-206ENST00000395795 SPTY2D1-AS1A0A0U1RR47 76 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 TSPAN11A1L157 253 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 A6NNZ2 444 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 SMTNL1A8MU46 457 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 TSPAN6O43657 245 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 BUB1BO60566 1050 aaPredicted RBP16.39■□□□□ 0.21
CXCL12-206ENST00000395795 LRCH4O75427 683 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 CCDC172P0C7W6 258 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 TCF4P15884 667 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 CKMT2P17540 419 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 ACP1P24666 158 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 PSMA2P25787 234 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 MIPP30301 263 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 RGRP47804 291 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 MAPK8IP2Q13387 824 aaPredicted RBP16.39■□□□□ 0.21
CXCL12-206ENST00000395795 ZNF211Q13398 564 aaPredicted RBP16.39■□□□□ 0.21
CXCL12-206ENST00000395795 ZNF542PQ5EBM4 170 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 FIGNQ5HY92 759 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 GDPD4Q6W3E5 623 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 ZSWIM9Q86XI8 627 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 OR4C6Q8NH72 309 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 CASKIN2Q8WXE0 1202 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 RFFLQ8WZ73 363 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 IFT43Q96FT9 208 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 GDAP1L1Q96MZ0 367 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 CALN1Q9BXU9 219 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 CPEB1Q9BZB8 566 aaKnown RBP16.39■□□□□ 0.21
CXCL12-206ENST00000395795 EDEM3Q9BZQ6 932 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 SLC39A8Q9C0K1 460 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 ISCUQ9H1K1 167 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 CCDC86Q9H6F5 360 aaKnown RBP16.39■□□□□ 0.21
CXCL12-206ENST00000395795 CBX8Q9HC52 389 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 DKK3Q9UBP4 350 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 HPCAL4Q9UM19 191 aa16.39■□□□□ 0.21
CXCL12-206ENST00000395795 TDRD6O60522 2096 aaKnown RBP16.39■□□□□ 0.21
CXCL12-206ENST00000395795 ANKRD11Q6UB99 2663 aaPredicted RBP16.39■□□□□ 0.21
CXCL12-206ENST00000395795 FGF10O15520 208 aaPredicted RBP16.38■□□□□ 0.21
CXCL12-206ENST00000395795 PRAMEF11O60813 436 aa16.38■□□□□ 0.21
CXCL12-206ENST00000395795 IL1R2P27930 398 aa16.38■□□□□ 0.21
CXCL12-206ENST00000395795 HTR7P34969 479 aa16.38■□□□□ 0.21
CXCL12-206ENST00000395795 IGFALSP35858 605 aa16.38■□□□□ 0.21
CXCL12-206ENST00000395795 EIF2B5Q13144 721 aaKnown RBP16.38■□□□□ 0.21
CXCL12-206ENST00000395795 ARHGAP36Q6ZRI8 547 aa16.38■□□□□ 0.21
CXCL12-206ENST00000395795 RYBPQ8N488 228 aaPredicted RBP16.38■□□□□ 0.21
CXCL12-206ENST00000395795 CELF6Q96J87 481 aaKnown RBP16.38■□□□□ 0.21
CXCL12-206ENST00000395795 EXOC2Q96KP1 924 aa16.38■□□□□ 0.21
CXCL12-206ENST00000395795 OSBPL1AQ9BXW6 950 aa16.38■□□□□ 0.21
CXCL12-206ENST00000395795 CATSPERBQ9H7T0 1116 aa16.38■□□□□ 0.21
CXCL12-206ENST00000395795 MBNL1Q9NR56 388 aaKnown RBP16.38■□□□□ 0.21
CXCL12-206ENST00000395795 PCSK1NQ9UHG2 260 aa16.38■□□□□ 0.21
CXCL12-206ENST00000395795 RAXQ9Y2V3 346 aa16.38■□□□□ 0.21
CXCL12-206ENST00000395795 ANKRD62A6NC57 917 aa16.37■□□□□ 0.21
CXCL12-206ENST00000395795 PIGNO95427 931 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms