RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 C1orf131Q8NDD1 294 aaKnown RBP16.09■□□□□ 0.17
SNCA-205ENST00000394991 SMARCE1Q969G3 411 aa16.09■□□□□ 0.17
SNCA-205ENST00000394991 CCDC74AQ96AQ1 378 aa16.09■□□□□ 0.17
SNCA-205ENST00000394991 CENPTQ96BT3 561 aa16.09■□□□□ 0.17
SNCA-205ENST00000394991 CCDC34Q96HJ3 373 aa16.09■□□□□ 0.17
SNCA-205ENST00000394991 DHTKD1Q96HY7 919 aaPredicted RBP16.09■□□□□ 0.17
SNCA-205ENST00000394991 NPY6RQ99463 290 aa16.09■□□□□ 0.17
SNCA-205ENST00000394991 SPON2Q9BUD6 331 aa16.09■□□□□ 0.17
SNCA-205ENST00000394991 FOXP3Q9BZS1 431 aa16.09■□□□□ 0.17
SNCA-205ENST00000394991 TM6SF2Q9BZW4 377 aa16.09■□□□□ 0.17
SNCA-205ENST00000394991 SCAND2PQ9GZW5 306 aaPredicted RBP16.09■□□□□ 0.17
SNCA-205ENST00000394991 ZDHHC6Q9H6R6 413 aa16.09■□□□□ 0.17
SNCA-205ENST00000394991 WDCPQ9H6R7 721 aa16.09■□□□□ 0.17
SNCA-205ENST00000394991 ARHGEF17Q96PE2 2063 aaPredicted RBP16.09■□□□□ 0.17
SNCA-205ENST00000394991 SDK2Q58EX2 2172 aa16.09■□□□□ 0.17
SNCA-205ENST00000394991 ZFC3H1O60293 1989 aaKnown RBP16.08■□□□□ 0.16
SNCA-205ENST00000394991 A0A1W2PQM1 296 aa16.08■□□□□ 0.16
SNCA-205ENST00000394991 C16orf96A6NNT2 1141 aa16.08■□□□□ 0.16
SNCA-205ENST00000394991 AFPP02771 609 aaKnown RBP16.08■□□□□ 0.16
SNCA-205ENST00000394991 WT1P19544 449 aaPredicted RBP16.08■□□□□ 0.16
SNCA-205ENST00000394991 OR1E1P30953 314 aa16.08■□□□□ 0.16
SNCA-205ENST00000394991 THOP1P52888 689 aa16.08■□□□□ 0.16
SNCA-205ENST00000394991 CCL7P80098 99 aa16.08■□□□□ 0.16
SNCA-205ENST00000394991 SLC6A3Q01959 620 aa16.08■□□□□ 0.16
SNCA-205ENST00000394991 EIF3IQ13347 325 aaKnown RBP16.08■□□□□ 0.16
SNCA-205ENST00000394991 PTPN20Q4JDL3 420 aa16.08■□□□□ 0.16
SNCA-205ENST00000394991 RETSATQ6NUM9 610 aa16.08■□□□□ 0.16
SNCA-205ENST00000394991 SDR16C5Q8N3Y7 309 aa16.08■□□□□ 0.16
SNCA-205ENST00000394991 ZNF397Q8NF99 534 aaPredicted RBP16.08■□□□□ 0.16
SNCA-205ENST00000394991 OR6K2Q8NGY2 324 aa16.08■□□□□ 0.16
SNCA-205ENST00000394991 ARHGAP9Q9BRR9 750 aa16.08■□□□□ 0.16
SNCA-205ENST00000394991 ATP13A1Q9HD20 1204 aa16.08■□□□□ 0.16
SNCA-205ENST00000394991 GULP1Q9UBP9 304 aa16.08■□□□□ 0.16
SNCA-205ENST00000394991 PCDHGC3Q9UN70 934 aa16.08■□□□□ 0.16
SNCA-205ENST00000394991 ILVBLA1L0T0 632 aa16.07■□□□□ 0.16
SNCA-205ENST00000394991 SMC2O95347 1197 aa16.07■□□□□ 0.16
SNCA-205ENST00000394991 LIPCP11150 499 aa16.07■□□□□ 0.16
SNCA-205ENST00000394991 SULT1E1P49888 294 aa16.07■□□□□ 0.16
SNCA-205ENST00000394991 INHBCP55103 352 aa16.07■□□□□ 0.16
SNCA-205ENST00000394991 APBA1Q02410 837 aa16.07■□□□□ 0.16
SNCA-205ENST00000394991 PTK2BQ14289 1009 aa16.07■□□□□ 0.16
SNCA-205ENST00000394991 FAXCQ5TGI0 409 aa16.07■□□□□ 0.16
SNCA-205ENST00000394991 KLHL10Q6JEL2 608 aa16.07■□□□□ 0.16
SNCA-205ENST00000394991 ESRP1Q6NXG1 681 aaKnown RBP16.07■□□□□ 0.16
SNCA-205ENST00000394991 MACC1Q6ZN28 852 aa16.07■□□□□ 0.16
SNCA-205ENST00000394991 VASH2Q86V25 355 aa16.07■□□□□ 0.16
SNCA-205ENST00000394991 VPS36Q86VN1 386 aa16.07■□□□□ 0.16
SNCA-205ENST00000394991 ARL10Q8N8L6 244 aa16.07■□□□□ 0.16
SNCA-205ENST00000394991 PCDH19Q8TAB3 1148 aa16.07■□□□□ 0.16
SNCA-205ENST00000394991 RAB7BQ96AH8 199 aa16.07■□□□□ 0.16
SNCA-205ENST00000394991 GFM1Q96RP9 751 aaKnown RBP16.07■□□□□ 0.16
SNCA-205ENST00000394991 SRRTQ9BXP5 876 aaKnown RBP16.07■□□□□ 0.16
SNCA-205ENST00000394991 SLC13A1Q9BZW2 595 aa16.07■□□□□ 0.16
SNCA-205ENST00000394991 MBNL1Q9NR56 388 aaKnown RBP16.07■□□□□ 0.16
SNCA-205ENST00000394991 SIRPGQ9P1W8 387 aa16.07■□□□□ 0.16
SNCA-205ENST00000394991 PISDQ9UG56 409 aa16.07■□□□□ 0.16
SNCA-205ENST00000394991 PCDHGA4Q9Y5G9 962 aa16.07■□□□□ 0.16
SNCA-205ENST00000394991 NEMP1O14524 444 aa16.06■□□□□ 0.16
SNCA-205ENST00000394991 AREL1O15033 823 aa16.06■□□□□ 0.16
SNCA-205ENST00000394991 RPLP0P05388 317 aaKnown RBP16.06■□□□□ 0.16
SNCA-205ENST00000394991 ITIH1P19827 911 aa16.06■□□□□ 0.16
SNCA-205ENST00000394991 CCKBRP32239 447 aa16.06■□□□□ 0.16
SNCA-205ENST00000394991 USP8P40818 1118 aa16.06■□□□□ 0.16
SNCA-205ENST00000394991 SLC20A2Q08357 652 aa16.06■□□□□ 0.16
SNCA-205ENST00000394991 STIM1Q13586 685 aa16.06■□□□□ 0.16
SNCA-205ENST00000394991 TCEA2Q15560 299 aa16.06■□□□□ 0.16
SNCA-205ENST00000394991 TBR1Q16650 682 aa16.06■□□□□ 0.16
SNCA-205ENST00000394991 ARHGAP44Q17R89 818 aa16.06■□□□□ 0.16
SNCA-205ENST00000394991 ZNF805Q5CZA5 627 aa16.06■□□□□ 0.16
SNCA-205ENST00000394991 LRRC73Q5JTD7 316 aa16.06■□□□□ 0.16
SNCA-205ENST00000394991 LRRC31Q6UY01 552 aa16.06■□□□□ 0.16
SNCA-205ENST00000394991 ZNF783Q6ZMS7 281 aa16.06■□□□□ 0.16
SNCA-205ENST00000394991 NYAP1Q6ZVC0 841 aa16.06■□□□□ 0.16
SNCA-205ENST00000394991 TP53I13Q8NBR0 393 aaPredicted RBP16.06■□□□□ 0.16
SNCA-205ENST00000394991 HTR3CQ8WXA8 447 aa16.06■□□□□ 0.16
SNCA-205ENST00000394991 NT5C3BQ969T7 300 aa16.06■□□□□ 0.16
SNCA-205ENST00000394991 PGAP3Q96FM1 320 aaPredicted RBP16.06■□□□□ 0.16
SNCA-205ENST00000394991 C1orf74Q96LT6 269 aa16.06■□□□□ 0.16
SNCA-205ENST00000394991 TBCBQ99426 244 aa16.06■□□□□ 0.16
SNCA-205ENST00000394991 SEMA3CQ99985 751 aa16.06■□□□□ 0.16
SNCA-205ENST00000394991 CPEB1Q9BZB8 566 aaKnown RBP16.06■□□□□ 0.16
SNCA-205ENST00000394991 STRADBQ9C0K7 418 aa16.06■□□□□ 0.16
SNCA-205ENST00000394991 RRN3Q9NYV6 651 aa16.06■□□□□ 0.16
SNCA-205ENST00000394991 MAN1B1Q9UKM7 699 aa16.06■□□□□ 0.16
SNCA-205ENST00000394991 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.06■□□□□ 0.16
SNCA-205ENST00000394991 NVLO15381 856 aaKnown RBP16.05■□□□□ 0.16
SNCA-205ENST00000394991 BMP6P22004 513 aa16.05■□□□□ 0.16
SNCA-205ENST00000394991 ACVRL1P37023 503 aa16.05■□□□□ 0.16
SNCA-205ENST00000394991 EIF4A3P38919 411 aaKnown RBP16.05■□□□□ 0.16
SNCA-205ENST00000394991 ETV5P41161 510 aa16.05■□□□□ 0.16
SNCA-205ENST00000394991 MARSP56192 900 aaKnown RBP16.05■□□□□ 0.16
SNCA-205ENST00000394991 RNASE9P60153 205 aaKnown RBP16.05■□□□□ 0.16
SNCA-205ENST00000394991 YPEL5P62699 121 aa16.05■□□□□ 0.16
SNCA-205ENST00000394991 CYP4F2P78329 520 aa16.05■□□□□ 0.16
SNCA-205ENST00000394991 GNA12Q03113 381 aa16.05■□□□□ 0.16
SNCA-205ENST00000394991 PPARDQ03181 441 aa16.05■□□□□ 0.16
SNCA-205ENST00000394991 DEUP1Q05D60 604 aa16.05■□□□□ 0.16
SNCA-205ENST00000394991 ZNF574Q6ZN55 896 aaPredicted RBP16.05■□□□□ 0.16
SNCA-205ENST00000394991 ENOSF1Q7L5Y1 443 aa16.05■□□□□ 0.16
SNCA-205ENST00000394991 ZFAND4Q86XD8 727 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms