RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 IL10RBQ08334 325 aa15.23■□□□□ 0.03
GPC3-202ENST00000394299 THOC5Q13769 683 aaKnown RBP15.23■□□□□ 0.03
GPC3-202ENST00000394299 RBM20Q5T481 1227 aaKnown RBP15.23■□□□□ 0.03
GPC3-202ENST00000394299 MAVSQ7Z434 540 aa15.23■□□□□ 0.03
GPC3-202ENST00000394299 PTAR1Q7Z6K3 402 aaPredicted RBP15.23■□□□□ 0.03
GPC3-202ENST00000394299 TREML1Q86YW5 311 aa15.23■□□□□ 0.03
GPC3-202ENST00000394299 TMEM151AQ8N4L1 468 aa15.23■□□□□ 0.03
GPC3-202ENST00000394299 GPATCH11Q8N954 259 aa15.23■□□□□ 0.03
GPC3-202ENST00000394299 ZNF461Q8TAF7 563 aa15.23■□□□□ 0.03
GPC3-202ENST00000394299 EXOC2Q96KP1 924 aa15.23■□□□□ 0.03
GPC3-202ENST00000394299 PRICKLE1Q96MT3 831 aaPredicted RBP15.23■□□□□ 0.03
GPC3-202ENST00000394299 SMIM14Q96QK8 99 aa15.23■□□□□ 0.03
GPC3-202ENST00000394299 SEZ6LQ9BYH1 1024 aa15.23■□□□□ 0.03
GPC3-202ENST00000394299 TASP1Q9H6P5 420 aa15.23■□□□□ 0.03
GPC3-202ENST00000394299 SUDS3Q9H7L9 328 aaPredicted RBP15.23■□□□□ 0.03
GPC3-202ENST00000394299 ATP13A1Q9HD20 1204 aa15.23■□□□□ 0.03
GPC3-202ENST00000394299 KCNK4Q9NYG8 393 aa15.23■□□□□ 0.03
GPC3-202ENST00000394299 FNIP2Q9P278 1114 aa15.23■□□□□ 0.03
GPC3-202ENST00000394299 MTF2Q9Y483 593 aaPredicted RBP15.23■□□□□ 0.03
GPC3-202ENST00000394299 SERPINE1P05121 402 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 ALDH18A1P54886 795 aaKnown RBP15.22■□□□□ 0.03
GPC3-202ENST00000394299 DLG1Q12959 904 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 GALNT3Q14435 633 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 SNCBQ16143 134 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 HECTD3Q5T447 861 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 SNX30Q5VWJ9 437 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 IL31Q6EBC2 164 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 NEPROQ6NW34 567 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 LONP2Q86WA8 852 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 OR13J1Q8NGT2 312 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 NSMCE1Q8WV22 266 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 RILPQ96NA2 401 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 SLC22A12Q96S37 553 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 MIPEPQ99797 713 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 LRMDAQ9H2I8 198 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 NOD2Q9HC29 1040 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 TMEM39AQ9NV64 488 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 FBXO5Q9UKT4 447 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 FAM95CA0A1B0GW59 222 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 H3BNC9 293 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 PRAMEF11O60813 436 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 STC2O76061 302 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 ATXN1LP0C7T5 689 aaKnown RBP15.22■□□□□ 0.03
GPC3-202ENST00000394299 CORO1AP31146 461 aaKnown RBP15.22■□□□□ 0.03
GPC3-202ENST00000394299 RGRP47804 291 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 HARS2P49590 506 aaKnown RBP15.22■□□□□ 0.03
GPC3-202ENST00000394299 CSRP3P50461 194 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 TAS2R39P59534 338 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 USP4Q13107 963 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 PARP15Q460N3 678 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 CNTN4Q8IWV2 1026 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 CENPLQ8N0S6 344 aaPredicted RBP15.22■□□□□ 0.03
GPC3-202ENST00000394299 RAB3IL1Q8TBN0 382 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 PIWIL2Q8TC59 973 aaKnown RBP15.22■□□□□ 0.03
GPC3-202ENST00000394299 SH3RF2Q8TEC5 729 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 NXNL1Q96CM4 212 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 PTCD3Q96EY7 689 aaKnown RBP15.22■□□□□ 0.03
GPC3-202ENST00000394299 OMDQ99983 421 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 ARNT2Q9HBZ2 717 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 AFF4Q9UHB7 1163 aaKnown RBP15.22■□□□□ 0.03
GPC3-202ENST00000394299 TLK1Q9UKI8 766 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 BACE2Q9Y5Z0 518 aa15.22■□□□□ 0.03
GPC3-202ENST00000394299 ABLIM3O94929 683 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 HOXD9P28356 352 aaPredicted RBP15.21■□□□□ 0.03
GPC3-202ENST00000394299 ABCE1P61221 599 aaKnown RBP15.21■□□□□ 0.03
GPC3-202ENST00000394299 CCDC153Q494R4 210 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 TSTD2Q5T7W7 516 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 RINLQ6ZS11 566 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 CCDC91Q7Z6B0 441 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 FBXO27Q8NI29 283 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 TOP1MTQ969P6 601 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 ELMO2Q96JJ3 720 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 SHCBP1LQ9BZQ2 653 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 COMMD8Q9NX08 183 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 TBX21Q9UL17 535 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 ARL5AQ9Y689 179 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 ATP5HO75947 161 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 CSPG5O95196 566 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 SOD2P04179 222 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 ACRP10323 421 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 MNAT1P51948 309 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 GNA12Q03113 381 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 UBAP2LQ14157 1087 aaKnown RBP15.21■□□□□ 0.03
GPC3-202ENST00000394299 TAF12Q16514 161 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 C2CD4AQ8NCU7 369 aaPredicted RBP15.21■□□□□ 0.03
GPC3-202ENST00000394299 OR6Y1Q8NGX8 325 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 OR6P1Q8NGX9 317 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 BHMTQ93088 406 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 HDAC10Q969S8 669 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 SGF29Q96ES7 293 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 NSL1Q96IY1 281 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 SCYL1Q96KG9 808 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 PDFQ9HBH1 243 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 MARCH4Q9P2E8 410 aaPredicted RBP15.21■□□□□ 0.03
GPC3-202ENST00000394299 L3MBTL1Q9Y468 752 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 YIPF1Q9Y548 306 aa15.21■□□□□ 0.03
GPC3-202ENST00000394299 MICAL3Q7RTP6 2002 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 HEATR9A2RTY3 570 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 CSF2RAP15509 400 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 MAPKAPK2P49137 400 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms