RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 ITGA2BP08514 1039 aa15.62■□□□□ 0.09
CHMP3-202ENST00000393773 KRT10P13645 584 aa15.62■□□□□ 0.09
CHMP3-202ENST00000393773 GKP32189 559 aa15.62■□□□□ 0.09
CHMP3-202ENST00000393773 KRT9P35527 623 aa15.62■□□□□ 0.09
CHMP3-202ENST00000393773 ACVRL1P37023 503 aa15.62■□□□□ 0.09
CHMP3-202ENST00000393773 GABRB2P47870 512 aa15.62■□□□□ 0.09
CHMP3-202ENST00000393773 RNASE9P60153 205 aaKnown RBP15.62■□□□□ 0.09
CHMP3-202ENST00000393773 SLC20A2Q08357 652 aa15.62■□□□□ 0.09
CHMP3-202ENST00000393773 EXOC3L4Q17RC7 722 aa15.62■□□□□ 0.09
CHMP3-202ENST00000393773 PRRT3Q5FWE3 981 aa15.62■□□□□ 0.09
CHMP3-202ENST00000393773 FAM102AQ5T9C2 384 aaPredicted RBP15.62■□□□□ 0.09
CHMP3-202ENST00000393773 XYLT1Q86Y38 959 aa15.62■□□□□ 0.09
CHMP3-202ENST00000393773 DRC7Q8IY82 874 aa15.62■□□□□ 0.09
CHMP3-202ENST00000393773 PHACTR4Q8IZ21 702 aa15.62■□□□□ 0.09
CHMP3-202ENST00000393773 BTN2A2Q8WVV5 523 aa15.62■□□□□ 0.09
CHMP3-202ENST00000393773 NAT6Q93015 286 aa15.62■□□□□ 0.09
CHMP3-202ENST00000393773 RAB7BQ96AH8 199 aa15.62■□□□□ 0.09
CHMP3-202ENST00000393773 ISG20Q96AZ6 181 aaKnown RBP15.62■□□□□ 0.09
CHMP3-202ENST00000393773 CCDC3Q9BQI4 270 aa15.62■□□□□ 0.09
CHMP3-202ENST00000393773 ZYG11BQ9C0D3 744 aa15.62■□□□□ 0.09
CHMP3-202ENST00000393773 SPASTQ9UBP0 616 aa15.62■□□□□ 0.09
CHMP3-202ENST00000393773 IPO11Q9UI26 975 aaKnown RBP15.62■□□□□ 0.09
CHMP3-202ENST00000393773 C16orf96A6NNT2 1141 aa15.61■□□□□ 0.09
CHMP3-202ENST00000393773 NTN3O00634 580 aaPredicted RBP15.61■□□□□ 0.09
CHMP3-202ENST00000393773 AREL1O15033 823 aa15.61■□□□□ 0.09
CHMP3-202ENST00000393773 SRGAP2O75044 1071 aa15.61■□□□□ 0.09
CHMP3-202ENST00000393773 TNFSF15O95150 251 aa15.61■□□□□ 0.09
CHMP3-202ENST00000393773 CELA2BP08218 269 aaPredicted RBP15.61■□□□□ 0.09
CHMP3-202ENST00000393773 DNA2P51530 1060 aa15.61■□□□□ 0.09
CHMP3-202ENST00000393773 SGCGQ13326 291 aa15.61■□□□□ 0.09
CHMP3-202ENST00000393773 ZNF805Q5CZA5 627 aa15.61■□□□□ 0.09
CHMP3-202ENST00000393773 MANEALQ5VSG8 457 aa15.61■□□□□ 0.09
CHMP3-202ENST00000393773 FOXR1Q6PIV2 292 aa15.61■□□□□ 0.09
CHMP3-202ENST00000393773 MACC1Q6ZN28 852 aa15.61■□□□□ 0.09
CHMP3-202ENST00000393773 CCDC81Q6ZN84 652 aa15.61■□□□□ 0.09
CHMP3-202ENST00000393773 FAM131BQ86XD5 332 aa15.61■□□□□ 0.09
CHMP3-202ENST00000393773 PLPP6Q8IY26 295 aa15.61■□□□□ 0.09
CHMP3-202ENST00000393773 ARL14Q8N4G2 192 aa15.61■□□□□ 0.09
CHMP3-202ENST00000393773 WDR48Q8TAF3 677 aa15.61■□□□□ 0.09
CHMP3-202ENST00000393773 ARHGEF2Q92974 986 aaKnown RBP15.61■□□□□ 0.09
CHMP3-202ENST00000393773 CENPTQ96BT3 561 aa15.61■□□□□ 0.09
CHMP3-202ENST00000393773 LIN37Q96GY3 246 aaPredicted RBP15.61■□□□□ 0.09
CHMP3-202ENST00000393773 HAPLN3Q96S86 360 aa15.61■□□□□ 0.09
CHMP3-202ENST00000393773 CLPBQ9H078 707 aa15.61■□□□□ 0.09
CHMP3-202ENST00000393773 NDFIP2Q9NV92 336 aa15.61■□□□□ 0.09
CHMP3-202ENST00000393773 HECAQ9UBI9 543 aaPredicted RBP15.61■□□□□ 0.09
CHMP3-202ENST00000393773 PPARGC1AQ9UBK2 798 aaKnown RBP15.61■□□□□ 0.09
CHMP3-202ENST00000393773 UNC13CQ8NB66 2214 aa15.61■□□□□ 0.09
CHMP3-202ENST00000393773 FAM170AA1A519 330 aa15.6■□□□□ 0.09
CHMP3-202ENST00000393773 FOXN3O00409 490 aaPredicted RBP15.6■□□□□ 0.09
CHMP3-202ENST00000393773 SLC28A2O43868 658 aa15.6■□□□□ 0.09
CHMP3-202ENST00000393773 FGFR1OPO95684 399 aaKnown RBP15.6■□□□□ 0.09
CHMP3-202ENST00000393773 GSRP00390 522 aa15.6■□□□□ 0.09
CHMP3-202ENST00000393773 UGT2B4P06133 528 aa15.6■□□□□ 0.09
CHMP3-202ENST00000393773 RPIAP49247 311 aa15.6■□□□□ 0.09
CHMP3-202ENST00000393773 THOP1P52888 689 aa15.6■□□□□ 0.09
CHMP3-202ENST00000393773 ADKP55263 362 aaKnown RBP15.6■□□□□ 0.09
CHMP3-202ENST00000393773 C1orf61Q13536 156 aa15.6■□□□□ 0.09
CHMP3-202ENST00000393773 SPIDRQ14159 915 aa15.6■□□□□ 0.09
CHMP3-202ENST00000393773 PTK2BQ14289 1009 aa15.6■□□□□ 0.09
CHMP3-202ENST00000393773 ARL13BQ3SXY8 428 aa15.6■□□□□ 0.09
CHMP3-202ENST00000393773 LRRC73Q5JTD7 316 aa15.6■□□□□ 0.09
CHMP3-202ENST00000393773 DPY19L2P1Q6NXN4 242 aa15.6■□□□□ 0.09
CHMP3-202ENST00000393773 B3GNT8Q7Z7M8 397 aa15.6■□□□□ 0.09
CHMP3-202ENST00000393773 NLRP14Q86W24 1093 aa15.6■□□□□ 0.09
CHMP3-202ENST00000393773 IRF2BP1Q8IU81 584 aa15.6■□□□□ 0.09
CHMP3-202ENST00000393773 FAM71AQ8IYT1 594 aa15.6■□□□□ 0.09
CHMP3-202ENST00000393773 KYQ8NBH2 561 aa15.6■□□□□ 0.09
CHMP3-202ENST00000393773 TP53I13Q8NBR0 393 aaPredicted RBP15.6■□□□□ 0.09
CHMP3-202ENST00000393773 TMEM35BQ8NCS4 154 aa15.6■□□□□ 0.09
CHMP3-202ENST00000393773 GLMNQ92990 594 aa15.6■□□□□ 0.09
CHMP3-202ENST00000393773 CFAP57Q96MR6 1250 aa15.6■□□□□ 0.09
CHMP3-202ENST00000393773 TMEM51Q9NW97 253 aa15.6■□□□□ 0.09
CHMP3-202ENST00000393773 RWDD2AQ9UIY3 292 aa15.6■□□□□ 0.09
CHMP3-202ENST00000393773 RABGEF1Q9UJ41 708 aa15.6■□□□□ 0.09
CHMP3-202ENST00000393773 TMEM59LQ9UK28 342 aa15.6■□□□□ 0.09
CHMP3-202ENST00000393773 DNAJC12Q9UKB3 198 aa15.6■□□□□ 0.09
CHMP3-202ENST00000393773 ATXN7L1Q9ULK2 861 aaPredicted RBP15.6■□□□□ 0.09
CHMP3-202ENST00000393773 D6RAR5 112 aa15.59■□□□□ 0.09
CHMP3-202ENST00000393773 NEMP1O14524 444 aa15.59■□□□□ 0.09
CHMP3-202ENST00000393773 EFSO43281 561 aa15.59■□□□□ 0.09
CHMP3-202ENST00000393773 ANXA6P08133 673 aa15.59■□□□□ 0.09
CHMP3-202ENST00000393773 TSHRP16473 764 aa15.59■□□□□ 0.09
CHMP3-202ENST00000393773 ZSCAN23Q3MJ62 389 aa15.59■□□□□ 0.09
CHMP3-202ENST00000393773 RAB6CQ53S08 254 aa15.59■□□□□ 0.09
CHMP3-202ENST00000393773 C2CD6Q53TS8 623 aa15.59■□□□□ 0.09
CHMP3-202ENST00000393773 VPS36Q86VN1 386 aa15.59■□□□□ 0.09
CHMP3-202ENST00000393773 ARL10Q8N8L6 244 aa15.59■□□□□ 0.09
CHMP3-202ENST00000393773 OR2AP1Q8NGE2 309 aa15.59■□□□□ 0.09
CHMP3-202ENST00000393773 C18orf8Q96DM3 657 aa15.59■□□□□ 0.09
CHMP3-202ENST00000393773 ARHGEF26Q96DR7 871 aa15.59■□□□□ 0.09
CHMP3-202ENST00000393773 CCNL2Q96S94 520 aaPredicted RBP15.59■□□□□ 0.09
CHMP3-202ENST00000393773 OSBPL1AQ9BXW6 950 aa15.59■□□□□ 0.09
CHMP3-202ENST00000393773 RAB6CQ9H0N0 254 aa15.59■□□□□ 0.09
CHMP3-202ENST00000393773 SYNDIG1Q9H7V2 258 aa15.59■□□□□ 0.09
CHMP3-202ENST00000393773 MBNL1Q9NR56 388 aaKnown RBP15.59■□□□□ 0.09
CHMP3-202ENST00000393773 ACSL6Q9UKU0 697 aa15.59■□□□□ 0.09
CHMP3-202ENST00000393773 PADI4Q9UM07 663 aa15.59■□□□□ 0.09
CHMP3-202ENST00000393773 ARHGEF17Q96PE2 2063 aaPredicted RBP15.59■□□□□ 0.09
CHMP3-202ENST00000393773 KRIT1O00522 736 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms