RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 ASIC1P78348 528 aa11.52□□□□□ -0.56
LAMB1-203ENST00000393560 CYB5R2Q6BCY4 276 aa11.52□□□□□ -0.56
LAMB1-203ENST00000393560 TMEM81Q6P7N7 255 aa11.52□□□□□ -0.56
LAMB1-203ENST00000393560 TRMT10CQ7L0Y3 403 aaKnown RBP11.52□□□□□ -0.56
LAMB1-203ENST00000393560 TRABD2AQ86V40 505 aa11.52□□□□□ -0.56
LAMB1-203ENST00000393560 RNF135Q8IUD6 432 aa11.52□□□□□ -0.56
LAMB1-203ENST00000393560 NKAIN4Q8IVV8 208 aa11.52□□□□□ -0.56
LAMB1-203ENST00000393560 CAMKK1Q8N5S9 505 aa11.52□□□□□ -0.56
LAMB1-203ENST00000393560 FNDC5Q8NAU1 212 aa11.52□□□□□ -0.56
LAMB1-203ENST00000393560 MCUQ8NE86 351 aa11.52□□□□□ -0.56
LAMB1-203ENST00000393560 OR52H1Q8NGJ2 320 aa11.52□□□□□ -0.56
LAMB1-203ENST00000393560 COPS7BQ9H9Q2 264 aaPredicted RBP11.52□□□□□ -0.56
LAMB1-203ENST00000393560 KCNK13Q9HB14 408 aa11.52□□□□□ -0.56
LAMB1-203ENST00000393560 CYP4F11Q9HBI6 524 aa11.52□□□□□ -0.56
LAMB1-203ENST00000393560 EVA1BQ9NVM1 165 aa11.52□□□□□ -0.56
LAMB1-203ENST00000393560 HRH3Q9Y5N1 445 aa11.52□□□□□ -0.56
LAMB1-203ENST00000393560 ACTL7AQ9Y615 435 aa11.52□□□□□ -0.56
LAMB1-203ENST00000393560 LAD1O00515 517 aa11.52□□□□□ -0.57
LAMB1-203ENST00000393560 SNAPINO95295 136 aa11.52□□□□□ -0.57
LAMB1-203ENST00000393560 NDST3O95803 873 aa11.52□□□□□ -0.57
LAMB1-203ENST00000393560 FABP1P07148 127 aa11.52□□□□□ -0.57
LAMB1-203ENST00000393560 IL1R1P14778 569 aa11.52□□□□□ -0.57
LAMB1-203ENST00000393560 TPMTP51580 245 aa11.52□□□□□ -0.57
LAMB1-203ENST00000393560 TCEAL1Q15170 157 aa11.52□□□□□ -0.57
LAMB1-203ENST00000393560 BRMS1LQ5PSV4 323 aa11.52□□□□□ -0.57
LAMB1-203ENST00000393560 DESI1Q6ICB0 168 aa11.52□□□□□ -0.57
LAMB1-203ENST00000393560 SUSD1Q6UWL2 747 aa11.52□□□□□ -0.57
LAMB1-203ENST00000393560 ANGPTL8Q6UXH0 198 aa11.52□□□□□ -0.57
LAMB1-203ENST00000393560 PRPF39Q86UA1 669 aaKnown RBP11.52□□□□□ -0.57
LAMB1-203ENST00000393560 RASGEF1CQ8N431 466 aa11.52□□□□□ -0.57
LAMB1-203ENST00000393560 RIT1Q92963 219 aa11.52□□□□□ -0.57
LAMB1-203ENST00000393560 EFHD1Q9BUP0 239 aa11.52□□□□□ -0.57
LAMB1-203ENST00000393560 ALG13Q9NP73 1137 aaKnown RBP11.52□□□□□ -0.57
LAMB1-203ENST00000393560 ZNF224Q9NZL3 707 aa11.52□□□□□ -0.57
LAMB1-203ENST00000393560 CYTH4Q9UIA0 394 aa11.52□□□□□ -0.57
LAMB1-203ENST00000393560 BAG5Q9UL15 447 aa11.52□□□□□ -0.57
LAMB1-203ENST00000393560 POMPQ9Y244 141 aa11.52□□□□□ -0.57
LAMB1-203ENST00000393560 SRPRBQ9Y5M8 271 aaKnown RBP11.52□□□□□ -0.57
LAMB1-203ENST00000393560 LRP5O75197 1615 aa11.52□□□□□ -0.57
LAMB1-203ENST00000393560 TRBV23-1A0A0A0MS06 115 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 ZBBXA8MT70 800 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 GSNP06396 782 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 HOXD4P09016 255 aaPredicted RBP11.51□□□□□ -0.57
LAMB1-203ENST00000393560 MYL4P12829 197 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 IFNAR1P17181 557 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 TM4SF1P30408 202 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 MAPK7Q13164 816 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 FIGNQ5HY92 759 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 LIPIQ6XZB0 460 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 C16orf86Q6ZW13 317 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 KBTBD6Q86V97 674 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 DSELQ8IZU8 1212 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 ZNF786Q8N393 782 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 ZNF527Q8NB42 609 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 MTG1Q9BT17 334 aaPredicted RBP11.51□□□□□ -0.57
LAMB1-203ENST00000393560 SEMA6AQ9H2E6 1030 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 AKIP1Q9NQ31 210 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 SCML1Q9UN30 329 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 ENTPD4Q9Y227 616 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 PCDHGA9Q9Y5G4 932 aaKnown RBP11.51□□□□□ -0.57
LAMB1-203ENST00000393560 CCDC78A2IDD5 438 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 TTLL8A6PVC2 850 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 STX16-NPEPL1H3BU86 382 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 ZBTB5O15062 677 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 AKAP10O43572 662 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 ATRNO75882 1429 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 EPHX2P34913 555 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 ARSDP51689 593 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 DRG2P55039 364 aaKnown RBP11.51□□□□□ -0.57
LAMB1-203ENST00000393560 GRSF1Q12849 480 aaKnown RBP eCLIP11.51□□□□□ -0.57
LAMB1-203ENST00000393560 NEDD8Q15843 81 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.51□□□□□ -0.57
LAMB1-203ENST00000393560 DPY19L3Q6ZPD9 716 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 POC5Q8NA72 575 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 GJA10Q969M2 543 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 BBS2Q9BXC9 721 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.51□□□□□ -0.57
LAMB1-203ENST00000393560 TFB2MQ9H5Q4 396 aaKnown RBP11.51□□□□□ -0.57
LAMB1-203ENST00000393560 ABCB10Q9NRK6 738 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 KCNH7Q9NS40 1196 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 PARP2Q9UGN5 583 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 ACOT9Q9Y305 439 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 BCORQ6W2J9 1755 aa11.51□□□□□ -0.57
LAMB1-203ENST00000393560 SF3B1O75533 1304 aaKnown RBP eCLIP11.5□□□□□ -0.573e-6■■■■■ 137.9
LAMB1-203ENST00000393560 PRKD3O94806 890 aa11.5□□□□□ -0.57
LAMB1-203ENST00000393560 GOT2P00505 430 aaKnown RBP11.5□□□□□ -0.57
LAMB1-203ENST00000393560 HOXA1P49639 335 aaPredicted RBP11.5□□□□□ -0.57
LAMB1-203ENST00000393560 KPNA2P52292 529 aaKnown RBP11.5□□□□□ -0.57
LAMB1-203ENST00000393560 NDST1P52848 882 aa11.5□□□□□ -0.57
LAMB1-203ENST00000393560 GPX6P59796 221 aa11.5□□□□□ -0.57
LAMB1-203ENST00000393560 RNF4P78317 190 aa11.5□□□□□ -0.57
LAMB1-203ENST00000393560 BFSP2Q13515 415 aa11.5□□□□□ -0.57
LAMB1-203ENST00000393560 BAATQ14032 418 aaPredicted RBP11.5□□□□□ -0.57
LAMB1-203ENST00000393560 EFR3AQ14156 821 aa11.5□□□□□ -0.57
LAMB1-203ENST00000393560 ADGRE1Q14246 886 aa11.5□□□□□ -0.57
LAMB1-203ENST00000393560 SLC6A19Q695T7 634 aa11.5□□□□□ -0.57
LAMB1-203ENST00000393560 BRAT1Q6PJG6 821 aa11.5□□□□□ -0.57
LAMB1-203ENST00000393560 SGMS1Q86VZ5 419 aa11.5□□□□□ -0.57
LAMB1-203ENST00000393560 PDPRQ8NCN5 879 aa11.5□□□□□ -0.57
LAMB1-203ENST00000393560 YIPF5Q969M3 257 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms