RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 GCNT3O95395 438 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 HMGCRP04035 888 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 CSF1RP07333 972 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 PFKFB1P16118 471 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 STIP1P31948 543 aaKnown RBP3.62□□□□□ -1.83
XRN1-202ENST00000392981 ARL1P40616 181 aaPredicted RBP3.62□□□□□ -1.83
XRN1-202ENST00000392981 RIPK4P57078 832 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 CDK18Q07002 472 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 ZNF568Q3ZCX4 644 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 TDRD12Q587J7 1177 aaKnown RBP3.62□□□□□ -1.83
XRN1-202ENST00000392981 Q6ZVL8 140 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 GALNT6Q8NCL4 622 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 FAM81AQ8TBF8 368 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 FEZF2Q8TBJ5 459 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 SEC14L1Q92503 715 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 TMCO6Q96DC7 493 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 ADAD1Q96M93 576 aaKnown RBP3.62□□□□□ -1.83
XRN1-202ENST00000392981 HARBI1Q96MB7 349 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 QRFPRQ96P65 431 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 RBM14Q96PK6 669 aaKnown RBP3.62□□□□□ -1.83
XRN1-202ENST00000392981 WRNIP1Q96S55 665 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 FDXACB1Q9BRP7 624 aaPredicted RBP3.62□□□□□ -1.83
XRN1-202ENST00000392981 NPLQ9BXD5 320 aaPredicted RBP3.62□□□□□ -1.83
XRN1-202ENST00000392981 GON7Q9BXV9 100 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 PRDM13Q9H4Q3 707 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 SMURF2Q9HAU4 748 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 TMLHEQ9NVH6 421 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 ZFP69BQ9UJL9 534 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 CA14Q9ULX7 337 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 CDY1Q9Y6F8 540 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 EEA1Q15075 1411 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 BIN1O00499 593 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 DYRK3O43781 588 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 E2F6O75461 281 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 NTSR2O95665 410 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 NR2F6P10588 404 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 TFPIP10646 304 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 PIM1P11309 404 aaPredicted RBP3.61□□□□□ -1.83
XRN1-202ENST00000392981 RPA2P15927 270 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 HNRNPA2B1P22626 353 aaKnown RBP3.61□□□□□ -1.83
XRN1-202ENST00000392981 RBL1P28749 1068 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 NPEPPSP55786 919 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 RUNX1T1Q06455 604 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 PTCHD3Q3KNS1 767 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 TBRG1Q3YBR2 411 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 PLEKHO1Q53GL0 409 aaPredicted RBP3.61□□□□□ -1.83
XRN1-202ENST00000392981 CD276Q5ZPR3 534 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 BBS12Q6ZW61 710 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 ERASQ7Z444 233 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 ARID3BQ8IVW6 561 aaPredicted RBP3.61□□□□□ -1.83
XRN1-202ENST00000392981 ARHGAP12Q8IWW6 846 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 STPG3Q8N7X2 389 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 RTL3Q8N8U3 475 aaKnown RBP3.61□□□□□ -1.83
XRN1-202ENST00000392981 IL17RCQ8NAC3 791 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 FBXO15Q8NCQ5 510 aaPredicted RBP3.61□□□□□ -1.83
XRN1-202ENST00000392981 FIBINQ8TAL6 211 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 TFAP2CQ92754 450 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 RAB7BQ96AH8 199 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 FNDC11Q9BVV2 318 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 SLC7A5P2Q9GIP4 190 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 CNOT10Q9H9A5 744 aaKnown RBP3.61□□□□□ -1.83
XRN1-202ENST00000392981 TBC1D17Q9HA65 648 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 PNO1Q9NRX1 252 aaKnown RBP3.61□□□□□ -1.83
XRN1-202ENST00000392981 HAO2Q9NYQ3 351 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 NFU1Q9UMS0 254 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 N6AMT1Q9Y5N5 214 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 COPG1Q9Y678 874 aaKnown RBP3.61□□□□□ -1.83
XRN1-202ENST00000392981 GOLGA6L7A0A1B0GV03 622 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 SAC3D1A6NKF1 404 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 ZNF208O43345 1280 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 SLC22A3O75751 556 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 VNN1O95497 513 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 ACP5P13686 325 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 CCR3P51677 355 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 DDR1Q08345 913 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 NAE1Q13564 534 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 DDX39BQ13838 428 aaKnown RBP3.61□□□□□ -1.83
XRN1-202ENST00000392981 E2F2Q14209 437 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 MANEALQ5VSG8 457 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 FOXP4Q8IVH2 680 aaPredicted RBP3.61□□□□□ -1.83
XRN1-202ENST00000392981 CDAN1Q8IWY9 1227 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 C16orf71Q8IYS4 520 aaPredicted RBP3.61□□□□□ -1.83
XRN1-202ENST00000392981 UBE2J2Q8N2K1 259 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 C2CD4AQ8NCU7 369 aaPredicted RBP3.61□□□□□ -1.83
XRN1-202ENST00000392981 SDCCAG3Q96C92 435 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 TOE1Q96GM8 510 aaKnown RBP3.61□□□□□ -1.83
XRN1-202ENST00000392981 ISCUQ9H1K1 167 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 BCO1Q9HAY6 547 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 SOHLH2Q9NX45 425 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 CNIH4Q9P003 139 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 COPS7AQ9UBW8 275 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 NINLQ9Y2I6 1382 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 SPAG9O60271 1321 aaKnown RBP3.61□□□□□ -1.83
XRN1-202ENST00000392981 CNTNAP4Q9C0A0 1308 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 SENP3-EIF4A1A0A087X0R7 540 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 PPEF2O14830 753 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 APBB3O95704 486 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 SERPINA3P01011 423 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 OPN1MWP04001 364 aa3.61□□□□□ -1.83
XRN1-202ENST00000392981 OPN1MW2P0DN77 364 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms