RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 SEPT6Q14141 434 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ODF1Q14990 250 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 NOMO1Q15155 1222 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 AMHR2Q16671 573 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 NOMO2Q5JPE7 1267 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 BTBD8Q5XKL5 378 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 PARGQ86W56 976 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 DDX42Q86XP3 938 aaKnown RBP eCLIP-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 LINC01555Q8NAE3 123 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 RCBTB1Q8NDN9 531 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 C3orf58Q8NDZ4 430 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 NPLOC4Q8TAT6 608 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 CENPTQ96BT3 561 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 IFT74Q96LB3 600 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 LINC00477Q96M19 166 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 MUS81Q96NY9 551 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 JAM3Q9BX67 310 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 CEP44Q9C0F1 390 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 NUAK2Q9H093 628 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 OSBPL5Q9H0X9 879 aaPredicted RBP-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 SMOC2Q9H3U7 446 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ISG20L2Q9H9L3 353 aaKnown RBP-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 GBA2Q9HCG7 927 aaPredicted RBP-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 COPRSQ9NQ92 184 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 SERHLQ9NQF3 203 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 POLR3BQ9NW08 1133 aaPredicted RBP-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 MAP3K20Q9NYL2 800 aaKnown RBP-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 LRFN1Q9P244 771 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 FBXO40Q9UH90 709 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 HACL1Q9UJ83 578 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 RIPK3Q9Y572 518 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 NUB1Q9Y5A7 615 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 OR51B4Q9Y5P0 310 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ADGRL1O94910 1474 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 DYNC1H1Q14204 4646 aaKnown RBP-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 KAT6BQ8WYB5 2073 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ABCA1O95477 2261 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 PCM1Q15154 2024 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 RPAP1Q9BWH6 1393 aaPredicted RBP-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 A0A0A6YYC8 382 aaPredicted RBP-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ASPDHA6ND91 283 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 TRIM49BA6NDI0 452 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 I3L1I5 382 aaPredicted RBP-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 LIASO43766 372 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 HTR3BO95264 441 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ABL1P00519 1130 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 DANCRP0C864 163 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 PDCP20941 246 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 GARTP22102 1010 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 TACR3P29371 465 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 HOXC12P31275 282 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 HNRNPH1P31943 449 aaKnown RBP-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ETV5P41161 510 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 NPBWR1P48145 328 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 FMO5P49326 533 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 FNTBP49356 437 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 FLT3LGP49771 235 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 MNAT1P51948 309 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 HDAC4P56524 1084 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 CLDN6P56747 220 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 SHC2P98077 582 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 DUSP2Q05923 314 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 PDE4DQ08499 809 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 PTP4A2Q12974 167 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 SLC14A1Q13336 389 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 PRKG1Q13976 671 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 TESK1Q15569 626 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 MPPED2Q15777 294 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 FAM110CQ1W6H9 321 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ISXQ2M1V0 245 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ZNF284Q2VY69 593 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 FFAR4Q5NUL3 377 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 DEPDC1Q5TB30 811 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 CC2D1AQ6P1N0 951 aaPredicted RBP-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 INO80CQ6PI98 192 aaPredicted RBP-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 TPTE2Q6XPS3 522 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 TMTC3Q6ZXV5 915 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 C16orf59Q7L2K0 433 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 AACSQ86V21 672 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 FAM109AQ8N4B1 249 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 FTMTQ8N4E7 242 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 OR2L5Q8NG80 312 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ZNF563Q8TA94 476 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 KCNG4Q8TDN1 519 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 SH3RF2Q8TEC5 729 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ANKRD24Q8TF21 1146 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 AGAP11Q8TF27 550 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 AUTS2Q8WXX7 1259 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 VPS33AQ96AX1 596 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 DYDC2Q96IM9 177 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 LRIG1Q96JA1 1093 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ZNF594Q96JF6 807 aaPredicted RBP-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ZNF514Q96K75 400 aaPredicted RBP-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 IMMP1LQ96LU5 166 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 FAM218AQ96MZ4 157 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 UIMC1Q96RL1 719 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 OSBPL9Q96SU4 736 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 SOX7Q9BT81 388 aa-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 NPLQ9BXD5 320 aaPredicted RBP-2.17□□□□□ -2.76
RNU6-1340P-201ENST00000384438 TRIM7Q9C029 511 aa-2.17□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms