RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 CDKAL1Q5VV42 579 aa26.81■■□□□ 1.88
NPHP3-202ENST00000383282 CDCP2Q5VXM1 449 aa26.81■■□□□ 1.88
NPHP3-202ENST00000383282 ZCCHC8Q6NZY4 707 aaKnown RBP26.81■■□□□ 1.88
NPHP3-202ENST00000383282 CCDC185Q8N715 623 aa26.81■■□□□ 1.88
NPHP3-202ENST00000383282 KLHL32Q96NJ5 620 aa26.81■■□□□ 1.88
NPHP3-202ENST00000383282 KLF6Q99612 283 aaPredicted RBP26.81■■□□□ 1.88
NPHP3-202ENST00000383282 CAAP1Q9H8G2 361 aa26.81■■□□□ 1.88
NPHP3-202ENST00000383282 PCDHB1Q9Y5F3 818 aa26.81■■□□□ 1.88
NPHP3-202ENST00000383282 AQP9O43315 295 aa26.8■■□□□ 1.88
NPHP3-202ENST00000383282 BUB1O43683 1085 aa26.8■■□□□ 1.88
NPHP3-202ENST00000383282 KDELR3O43731 214 aa26.8■■□□□ 1.88
NPHP3-202ENST00000383282 CALB1P05937 261 aa26.8■■□□□ 1.88
NPHP3-202ENST00000383282 JUNDP17535 347 aa26.8■■□□□ 1.88
NPHP3-202ENST00000383282 GPD1P21695 349 aa26.8■■□□□ 1.88
NPHP3-202ENST00000383282 PTK2BQ14289 1009 aa26.8■■□□□ 1.88
NPHP3-202ENST00000383282 LEKR1Q6ZMV7 388 aa26.8■■□□□ 1.88
NPHP3-202ENST00000383282 SLFN11Q7Z7L1 901 aa26.8■■□□□ 1.88
NPHP3-202ENST00000383282 LSMEM2Q8N112 164 aa26.8■■□□□ 1.88
NPHP3-202ENST00000383282 ANKRD20A12PQ8NF67 263 aa26.8■■□□□ 1.88
NPHP3-202ENST00000383282 MAPK15Q8TD08 544 aa26.8■■□□□ 1.88
NPHP3-202ENST00000383282 BTN2A2Q8WVV5 523 aa26.8■■□□□ 1.88
NPHP3-202ENST00000383282 CASKIN2Q8WXE0 1202 aa26.8■■□□□ 1.88
NPHP3-202ENST00000383282 PCMTD1Q96MG8 357 aaPredicted RBP26.8■■□□□ 1.88
NPHP3-202ENST00000383282 GDAP1L1Q96MZ0 367 aa26.8■■□□□ 1.88
NPHP3-202ENST00000383282 PRORYQ9H606 182 aa26.8■■□□□ 1.88
NPHP3-202ENST00000383282 NEU3Q9UQ49 428 aa26.8■■□□□ 1.88
NPHP3-202ENST00000383282 ITM2BQ9Y287 266 aa26.8■■□□□ 1.88
NPHP3-202ENST00000383282 MYLKQ15746 1914 aa26.8■■□□□ 1.88
NPHP3-202ENST00000383282 EPHB6O15197 1021 aa26.79■■□□□ 1.88
NPHP3-202ENST00000383282 MYF5P13349 255 aa26.79■■□□□ 1.88
NPHP3-202ENST00000383282 RFC1P35251 1148 aaPredicted RBP26.79■■□□□ 1.88
NPHP3-202ENST00000383282 PFN3P60673 137 aa26.79■■□□□ 1.88
NPHP3-202ENST00000383282 GDPD4Q6W3E5 623 aa26.79■■□□□ 1.88
NPHP3-202ENST00000383282 TTC7BQ86TV6 843 aa26.79■■□□□ 1.88
NPHP3-202ENST00000383282 C3orf20Q8ND61 904 aa26.79■■□□□ 1.88
NPHP3-202ENST00000383282 IFI44Q8TCB0 444 aa26.79■■□□□ 1.88
NPHP3-202ENST00000383282 LMX1AQ8TE12 382 aa26.79■■□□□ 1.88
NPHP3-202ENST00000383282 FCRL3Q96P31 734 aaPredicted RBP26.79■■□□□ 1.88
NPHP3-202ENST00000383282 C1QTNF7Q9BXJ2 289 aa26.79■■□□□ 1.88
NPHP3-202ENST00000383282 GGT7Q9UJ14 662 aa26.79■■□□□ 1.88
NPHP3-202ENST00000383282 LY6G6EA0A0G2JKS1 128 aa26.78■■□□□ 1.88
NPHP3-202ENST00000383282 ANKRD62A6NC57 917 aa26.78■■□□□ 1.88
NPHP3-202ENST00000383282 TMCC1O94876 653 aa26.78■■□□□ 1.88
NPHP3-202ENST00000383282 IGSF6O95976 241 aa26.78■■□□□ 1.88
NPHP3-202ENST00000383282 PTMSP20962 102 aa26.78■■□□□ 1.88
NPHP3-202ENST00000383282 EPHB2P29323 1055 aa26.78■■□□□ 1.88
NPHP3-202ENST00000383282 THOP1P52888 689 aa26.78■■□□□ 1.88
NPHP3-202ENST00000383282 CCDC173Q0VFZ6 552 aa26.78■■□□□ 1.88
NPHP3-202ENST00000383282 PTP4A2Q12974 167 aa26.78■■□□□ 1.88
NPHP3-202ENST00000383282 EFHC2Q5JST6 749 aa26.78■■□□□ 1.88
NPHP3-202ENST00000383282 ATXN7L2Q5T6C5 722 aaPredicted RBP26.78■■□□□ 1.88
NPHP3-202ENST00000383282 PHF13Q86YI8 300 aaPredicted RBP26.78■■□□□ 1.88
NPHP3-202ENST00000383282 RTL3Q8N8U3 475 aaKnown RBP26.78■■□□□ 1.88
NPHP3-202ENST00000383282 NEK11Q8NG66 645 aa26.78■■□□□ 1.88
NPHP3-202ENST00000383282 CXorf40AQ8TE69 158 aa26.78■■□□□ 1.88
NPHP3-202ENST00000383282 ZNF578Q96N58 590 aaPredicted RBP26.78■■□□□ 1.88
NPHP3-202ENST00000383282 PCDHB18PQ96TA0 734 aa26.78■■□□□ 1.88
NPHP3-202ENST00000383282 IL12RB2Q99665 862 aa26.78■■□□□ 1.88
NPHP3-202ENST00000383282 MAGEB5Q9BZ81 275 aa26.78■■□□□ 1.88
NPHP3-202ENST00000383282 SEPT11Q9NVA2 429 aaKnown RBP26.78■■□□□ 1.88
NPHP3-202ENST00000383282 SPASTQ9UBP0 616 aa26.78■■□□□ 1.88
NPHP3-202ENST00000383282 U3KQA8 63 aa26.78■■□□□ 1.88
NPHP3-202ENST00000383282 ASXL3Q9C0F0 2248 aa26.78■■□□□ 1.88
NPHP3-202ENST00000383282 SMG1Q96Q15 3661 aaKnown RBP26.77■■□□□ 1.88
NPHP3-202ENST00000383282 IGSF10Q6WRI0 2623 aa26.77■■□□□ 1.88
NPHP3-202ENST00000383282 TDRD6O60522 2096 aaKnown RBP26.77■■□□□ 1.88
NPHP3-202ENST00000383282 CSO75390 466 aaKnown RBP26.77■■□□□ 1.88
NPHP3-202ENST00000383282 GABREP78334 506 aa26.77■■□□□ 1.88
NPHP3-202ENST00000383282 CLEC16AQ2KHT3 1053 aa26.77■■□□□ 1.88
NPHP3-202ENST00000383282 INO80DQ53TQ3 878 aaPredicted RBP26.77■■□□□ 1.88
NPHP3-202ENST00000383282 SCYL2Q6P3W7 929 aa26.77■■□□□ 1.88
NPHP3-202ENST00000383282 WDR59Q6PJI9 974 aa26.77■■□□□ 1.88
NPHP3-202ENST00000383282 ZNF248Q8NDW4 579 aa26.77■■□□□ 1.88
NPHP3-202ENST00000383282 LGMNQ99538 433 aa26.77■■□□□ 1.88
NPHP3-202ENST00000383282 TTYH3Q9C0H2 523 aa26.77■■□□□ 1.88
NPHP3-202ENST00000383282 KLF15Q9UIH9 416 aa26.77■■□□□ 1.88
NPHP3-202ENST00000383282 SALL4Q9UJQ4 1053 aa26.77■■□□□ 1.88
NPHP3-202ENST00000383282 SIK3Q9Y2K2 1263 aa26.77■■□□□ 1.88
NPHP3-202ENST00000383282 RAI2Q9Y5P3 530 aa26.77■■□□□ 1.88
NPHP3-202ENST00000383282 SIGLEC16A6NMB1 481 aa26.76■■□□□ 1.87
NPHP3-202ENST00000383282 TPP1O14773 563 aa26.76■■□□□ 1.87
NPHP3-202ENST00000383282 AREL1O15033 823 aa26.76■■□□□ 1.87
NPHP3-202ENST00000383282 USP12O75317 370 aa26.76■■□□□ 1.87
NPHP3-202ENST00000383282 TM7SF2O76062 418 aa26.76■■□□□ 1.87
NPHP3-202ENST00000383282 MPOP05164 745 aa26.76■■□□□ 1.87
NPHP3-202ENST00000383282 DESP17661 470 aa26.76■■□□□ 1.87
NPHP3-202ENST00000383282 PCBP4P57723 403 aaKnown RBP26.76■■□□□ 1.87
NPHP3-202ENST00000383282 YBEYP58557 167 aaPredicted RBP26.76■■□□□ 1.87
NPHP3-202ENST00000383282 RHOAP61586 193 aa26.76■■□□□ 1.87
NPHP3-202ENST00000383282 CDKN3Q16667 212 aa26.76■■□□□ 1.87
NPHP3-202ENST00000383282 DEFB133Q30KQ1 61 aa26.76■■□□□ 1.87
NPHP3-202ENST00000383282 VPS36Q86VN1 386 aa26.76■■□□□ 1.87
NPHP3-202ENST00000383282 GLMNQ92990 594 aa26.76■■□□□ 1.87
NPHP3-202ENST00000383282 EPAS1Q99814 870 aa26.76■■□□□ 1.87
NPHP3-202ENST00000383282 CATSPERBQ9H7T0 1116 aa26.76■■□□□ 1.87
NPHP3-202ENST00000383282 FANCLQ9NW38 375 aa26.76■■□□□ 1.87
NPHP3-202ENST00000383282 APOBEC3BQ9UH17 382 aaKnown RBP26.76■■□□□ 1.87
NPHP3-202ENST00000383282 CPED1A4D0V7 1026 aa26.75■■□□□ 1.87
NPHP3-202ENST00000383282 TOR1BO14657 336 aa26.75■■□□□ 1.87
NPHP3-202ENST00000383282 SPINT1O43278 529 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms