RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 UGT1A4P22310 534 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 RPS12P25398 132 aaKnown RBP12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 UGT1A3P35503 534 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 UGT1A5P35504 534 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 PPARGP37231 505 aaPredicted RBP12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 ETFBP38117 255 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 BCAT1P54687 386 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 GJA9P57773 515 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 ZBTB17Q13105 803 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 TPSAB1Q15661 275 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 DPP9Q86TI2 863 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 DSELQ8IZU8 1212 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 ANKRD52Q8NB46 1076 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 NLGN2Q8NFZ4 835 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 PKP2Q99959 881 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 ILKAPQ9H0C8 392 aaPredicted RBP12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 CDH19Q9H159 772 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 GPRC5DQ9NZD1 345 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 CCDC167Q9P0B6 97 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 FER1L6Q2WGJ9 1857 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 I6L893 689 aaPredicted RBP12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 AURKAO14965 403 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 PTPN1P18031 435 aaKnown RBP12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 HMGB2P26583 209 aaKnown RBP12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 CHRNA4P43681 627 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 ACADVLP49748 655 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 RPL26P61254 145 aaKnown RBP12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 ARHGAP1Q07960 439 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 NIPAL4Q0D2K0 466 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 DGKDQ16760 1214 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 GEN1Q17RS7 908 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 C9orf57Q5W0N0 161 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 OSTM1Q86WC4 334 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 NT5DC4Q86YG4 428 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 STARD8Q92502 1023 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 DCPSQ96C86 337 aaKnown RBP12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 ISOC1Q96CN7 298 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 FRMD8Q9BZ67 464 aaPredicted RBP12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 TUBA8Q9NY65 449 aaPredicted RBP12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 SLC2A6Q9UGQ3 507 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 GIT1Q9Y2X7 761 aa12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 MTF2Q9Y483 593 aaPredicted RBP12.61□□□□□ -0.39
PRPF40B-202ENST00000380281 SHROOM3Q8TF72 1996 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 ATE1O95260 518 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 SLC4A1P02730 911 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 TFEBP19484 476 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 MATKP42679 507 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 MAGEA3P43357 314 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 ITKQ08881 620 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 BNIP3Q12983 259 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 TWF2Q6IBS0 349 aaKnown RBP12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 NXNL1Q96CM4 212 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 RTP4Q96DX8 246 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 RPL10LQ96L21 214 aaKnown RBP12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 HAUS8Q9BT25 410 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 GBA3Q9H227 469 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 EPS15L1Q9UBC2 864 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 XPR1Q9UBH6 696 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 V9GYQ6 96 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 PHIPQ8WWQ0 1821 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 A0A1W2PPW3 197 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 GAS2O43903 313 aaKnown RBP12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 GRK2P25098 689 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 PTPN3P26045 913 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 LAMC2Q13753 1193 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 CSHL1Q14406 222 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 FSCBQ5H9T9 825 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 SEL1L3Q68CR1 1132 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 DHRS4L2Q6PKH6 230 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 SLC26A9Q7LBE3 791 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 GPRIN1Q7Z2K8 1008 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 KBTBD7Q8WVZ9 684 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 TMEM40Q8WWA1 233 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 LRRC40Q9H9A6 602 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 SIAEQ9HAT2 523 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 ATAD3AQ9NVI7 634 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 C6orf203Q9P0P8 240 aaPredicted RBP12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 GIMAP2Q9UG22 337 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 TSR3Q9UJK0 312 aaKnown RBP12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 CDY2AQ9Y6F7 541 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 CDY1Q9Y6F8 540 aa12.6□□□□□ -0.39
PRPF40B-202ENST00000380281 SMIM28A0A1B0GU29 152 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 A6NL46 340 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 KCNU1A8MYU2 1149 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 CNMDO75829 334 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 HOXA11P31270 313 aaPredicted RBP12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 ITGADQ13349 1161 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 SPIDRQ14159 915 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 ADGRE1Q14246 886 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 TBCCQ15814 346 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 ARHGAP17Q68EM7 881 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 LPPQ93052 612 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 BORCS5Q969J3 196 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 ATP6V1E2Q96A05 226 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 GCOM2Q9BZD3 368 aaPredicted RBP12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 FZD10Q9ULW2 581 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 A0A1W2PQ67 120 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 CTSHP09668 335 aa12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 TCEA1P23193 301 aaKnown RBP12.59□□□□□ -0.39
PRPF40B-202ENST00000380281 HMOX2P30519 316 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms