RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 TIMM44O43615 452 aa20.06■□□□□ 0.8
PDLIM5-205ENST00000380180 TLL1O43897 1013 aa20.06■□□□□ 0.8
PDLIM5-205ENST00000380180 C1RP00736 705 aa20.06■□□□□ 0.8
PDLIM5-205ENST00000380180 ATXN1LP0C7T5 689 aaKnown RBP20.06■□□□□ 0.8
PDLIM5-205ENST00000380180 PAMP19021 973 aa20.06■□□□□ 0.8
PDLIM5-205ENST00000380180 BMPR1AP36894 532 aa20.06■□□□□ 0.8
PDLIM5-205ENST00000380180 MAGEA12P43365 314 aa20.06■□□□□ 0.8
PDLIM5-205ENST00000380180 STXBP5Q5T5C0 1151 aa20.06■□□□□ 0.8
PDLIM5-205ENST00000380180 C16orf46Q6P387 395 aa20.06■□□□□ 0.8
PDLIM5-205ENST00000380180 KYAT3Q6YP21 454 aaKnown RBP20.06■□□□□ 0.8
PDLIM5-205ENST00000380180 CNTN4Q8IWV2 1026 aa20.06■□□□□ 0.8
PDLIM5-205ENST00000380180 VPS39Q96JC1 886 aa20.06■□□□□ 0.8
PDLIM5-205ENST00000380180 PSKH2Q96QS6 385 aa20.06■□□□□ 0.8
PDLIM5-205ENST00000380180 MGME1Q9BQP7 344 aa20.06■□□□□ 0.8
PDLIM5-205ENST00000380180 MUC3BQ9H195 1237 aa20.06■□□□□ 0.8
PDLIM5-205ENST00000380180 CAB39LQ9H9S4 337 aa20.06■□□□□ 0.8
PDLIM5-205ENST00000380180 IRAK3Q9Y616 596 aa20.06■□□□□ 0.8
PDLIM5-205ENST00000380180 SLC4A7Q9Y6M7 1214 aa20.06■□□□□ 0.8
PDLIM5-205ENST00000380180 HELZP42694 1942 aaKnown RBP20.06■□□□□ 0.8
PDLIM5-205ENST00000380180 MYOFQ9NZM1 2061 aa20.06■□□□□ 0.8
PDLIM5-205ENST00000380180 H0Y626 953 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 NRG2O14511 850 aaPredicted RBP20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 GLRA3O75311 464 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 AHSGP02765 367 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 CDK18Q07002 472 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 CTBP1Q13363 440 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 FSCBQ5H9T9 825 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 ARMC3Q5W041 872 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 KIAA0930Q6ICG6 404 aaPredicted RBP20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 PSRC1Q6PGN9 363 aaPredicted RBP20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 TRPM8Q7Z2W7 1104 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 DENND6AQ8IWF6 608 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 CARNMT1Q8N4J0 409 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 ACVR1CQ8NER5 493 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 TMA16Q96EY4 203 aaKnown RBP20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 IFT43Q96FT9 208 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 CINPQ9BW66 212 aaPredicted RBP20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 EMILIN2Q9BXX0 1053 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 KDM4CQ9H3R0 1056 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 KLHL14Q9P2G3 628 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 EMCNQ9ULC0 261 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 CKMP06732 381 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 SERPINF2P08697 491 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 HSPA1AP0DMV8 641 aaKnown RBP20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 HSPA1BP0DMV9 641 aaKnown RBP20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 GJA1P17302 382 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 GABRB3P28472 473 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 CTNNB1P35222 781 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 GMPRP36959 345 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 RGRP47804 291 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 SERPINB8P50452 374 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 TSTD2Q5T7W7 516 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 N4BP2L1Q5TBK1 243 aaPredicted RBP20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 PLPP4Q5VZY2 271 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 ZC3HC1Q86WB0 502 aaKnown RBP20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 ELMOD1Q8N336 334 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 SLC22A17Q8WUG5 538 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 FEM1CQ96JP0 617 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 TSSK1BQ9BXA7 367 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 HAUS2Q9NVX0 235 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 GGT7Q9UJ14 662 aa20.05■□□□□ 0.8
PDLIM5-205ENST00000380180 A0A1W2PRU2 124 aa20.04■□□□□ 0.8
PDLIM5-205ENST00000380180 C2orf71A6NGG8 1288 aa20.04■□□□□ 0.8
PDLIM5-205ENST00000380180 EPOP01588 193 aa20.04■□□□□ 0.8
PDLIM5-205ENST00000380180 DNAJB1P25685 340 aa20.04■□□□□ 0.8
PDLIM5-205ENST00000380180 IRX4P78413 519 aa20.04■□□□□ 0.8
PDLIM5-205ENST00000380180 RFTN1Q14699 578 aaPredicted RBP20.04■□□□□ 0.8
PDLIM5-205ENST00000380180 GRM3Q14832 879 aa20.04■□□□□ 0.8
PDLIM5-205ENST00000380180 CYTH1Q15438 398 aa20.04■□□□□ 0.8
PDLIM5-205ENST00000380180 SPRED3Q2MJR0 410 aa20.04■□□□□ 0.8
PDLIM5-205ENST00000380180 NUDCD3Q8IVD9 361 aa20.04■□□□□ 0.8
PDLIM5-205ENST00000380180 MRPL43Q8N983 215 aaKnown RBP20.04■□□□□ 0.8
PDLIM5-205ENST00000380180 CORO1BQ9BR76 489 aa20.04■□□□□ 0.8
PDLIM5-205ENST00000380180 PLCD4Q9BRC7 762 aa20.04■□□□□ 0.8
PDLIM5-205ENST00000380180 RHOJQ9H4E5 214 aa20.04■□□□□ 0.8
PDLIM5-205ENST00000380180 NOD2Q9HC29 1040 aa20.04■□□□□ 0.8
PDLIM5-205ENST00000380180 ABCF3Q9NUQ8 709 aa20.04■□□□□ 0.8
PDLIM5-205ENST00000380180 LZTS1Q9Y250 596 aa20.04■□□□□ 0.8
PDLIM5-205ENST00000380180 E2F8A0AVK6 867 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 MYO1CO00159 1063 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 GFRA2O00451 464 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 KLF11O14901 512 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 CCL16O15467 120 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 SIN3BO75182 1162 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 GLUD1P00367 558 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 BPGMP07738 259 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 MYL4P12829 197 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 SCNN1BP51168 640 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 ARF5P84085 180 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 MPP1Q00013 466 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 THOC5Q13769 683 aaKnown RBP20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 DLG2Q15700 870 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 INSCQ1MX18 579 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 ZNF783Q6ZMS7 281 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 HJURPQ8NCD3 748 aaPredicted RBP20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 HERVK_113Q902F9 699 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 EXOC2Q96KP1 924 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 NSMCE3Q96MG7 304 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 GPR22Q99680 433 aa20.03■□□□□ 0.8
PDLIM5-205ENST00000380180 SIRPGQ9P1W8 387 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms