RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 ZMPSTE24O75844 475 aa18.07■□□□□ 0.48
PDLIM4-202ENST00000379018 UGT2B4P06133 528 aa18.07■□□□□ 0.48
PDLIM4-202ENST00000379018 HGFP14210 728 aa18.07■□□□□ 0.48
PDLIM4-202ENST00000379018 IGFALSP35858 605 aa18.07■□□□□ 0.48
PDLIM4-202ENST00000379018 MARSP56192 900 aaKnown RBP18.07■□□□□ 0.48
PDLIM4-202ENST00000379018 GNA12Q03113 381 aa18.07■□□□□ 0.48
PDLIM4-202ENST00000379018 SRSF6Q13247 344 aaKnown RBP18.07■□□□□ 0.48
PDLIM4-202ENST00000379018 PTK2BQ14289 1009 aa18.07■□□□□ 0.48
PDLIM4-202ENST00000379018 C2CD6Q53TS8 623 aa18.07■□□□□ 0.48
PDLIM4-202ENST00000379018 ESRP1Q6NXG1 681 aaKnown RBP18.07■□□□□ 0.48
PDLIM4-202ENST00000379018 GBP6Q6ZN66 633 aa18.07■□□□□ 0.48
PDLIM4-202ENST00000379018 B3GNT8Q7Z7M8 397 aa18.07■□□□□ 0.48
PDLIM4-202ENST00000379018 SLC47A2Q86VL8 602 aa18.07■□□□□ 0.48
PDLIM4-202ENST00000379018 ZNF397Q8NF99 534 aaPredicted RBP18.07■□□□□ 0.48
PDLIM4-202ENST00000379018 SHC3Q92529 594 aa18.07■□□□□ 0.48
PDLIM4-202ENST00000379018 FAM81BQ96LP2 452 aa18.07■□□□□ 0.48
PDLIM4-202ENST00000379018 ARHGAP9Q9BRR9 750 aa18.07■□□□□ 0.48
PDLIM4-202ENST00000379018 RRN3Q9NYV6 651 aa18.07■□□□□ 0.48
PDLIM4-202ENST00000379018 PNMA8BQ9ULN7 279 aaPredicted RBP18.07■□□□□ 0.48
PDLIM4-202ENST00000379018 PAXBP1Q9Y5B6 917 aa18.07■□□□□ 0.48
PDLIM4-202ENST00000379018 ITGA2BP08514 1039 aa18.06■□□□□ 0.48
PDLIM4-202ENST00000379018 TSHRP16473 764 aa18.06■□□□□ 0.48
PDLIM4-202ENST00000379018 SLC5A2P31639 672 aa18.06■□□□□ 0.48
PDLIM4-202ENST00000379018 ACVRL1P37023 503 aa18.06■□□□□ 0.48
PDLIM4-202ENST00000379018 PFN3P60673 137 aa18.06■□□□□ 0.48
PDLIM4-202ENST00000379018 MORC3Q14149 939 aa18.06■□□□□ 0.48
PDLIM4-202ENST00000379018 TGIF1Q15583 401 aa18.06■□□□□ 0.48
PDLIM4-202ENST00000379018 EXOC3L4Q17RC7 722 aa18.06■□□□□ 0.48
PDLIM4-202ENST00000379018 USP53Q70EK8 1073 aa18.06■□□□□ 0.48
PDLIM4-202ENST00000379018 CLEC14AQ86T13 490 aa18.06■□□□□ 0.48
PDLIM4-202ENST00000379018 FAM131BQ86XD5 332 aa18.06■□□□□ 0.48
PDLIM4-202ENST00000379018 FBXO39Q8N4B4 442 aa18.06■□□□□ 0.48
PDLIM4-202ENST00000379018 EXD3Q8N9H8 876 aa18.06■□□□□ 0.48
PDLIM4-202ENST00000379018 KYQ8NBH2 561 aa18.06■□□□□ 0.48
PDLIM4-202ENST00000379018 LENG8Q96PV6 779 aaPredicted RBP18.06■□□□□ 0.48
PDLIM4-202ENST00000379018 ZYG11BQ9C0D3 744 aa18.06■□□□□ 0.48
PDLIM4-202ENST00000379018 CLPBQ9H078 707 aa18.06■□□□□ 0.48
PDLIM4-202ENST00000379018 SSUH2Q9Y2M2 353 aa18.06■□□□□ 0.48
PDLIM4-202ENST00000379018 AHCTF1Q8WYP5 2266 aa18.06■□□□□ 0.48
PDLIM4-202ENST00000379018 IGLV3-10A0A075B6K4 115 aa18.05■□□□□ 0.48
PDLIM4-202ENST00000379018 PLD2O14939 933 aa18.05■□□□□ 0.48
PDLIM4-202ENST00000379018 YY2O15391 372 aa18.05■□□□□ 0.48
PDLIM4-202ENST00000379018 MMP20O60882 483 aa18.05■□□□□ 0.48
PDLIM4-202ENST00000379018 FGFR1OPO95684 399 aaKnown RBP18.05■□□□□ 0.48
PDLIM4-202ENST00000379018 F9P00740 461 aa18.05■□□□□ 0.48
PDLIM4-202ENST00000379018 PPARDQ03181 441 aa18.05■□□□□ 0.48
PDLIM4-202ENST00000379018 SLC20A2Q08357 652 aa18.05■□□□□ 0.48
PDLIM4-202ENST00000379018 ARL13BQ3SXY8 428 aa18.05■□□□□ 0.48
PDLIM4-202ENST00000379018 ZNF805Q5CZA5 627 aa18.05■□□□□ 0.48
PDLIM4-202ENST00000379018 ATXN7L2Q5T6C5 722 aaPredicted RBP18.05■□□□□ 0.48
PDLIM4-202ENST00000379018 TAF3Q5VWG9 929 aa18.05■□□□□ 0.48
PDLIM4-202ENST00000379018 RWDD4Q6NW29 188 aaKnown RBP18.05■□□□□ 0.48
PDLIM4-202ENST00000379018 ZNF783Q6ZMS7 281 aa18.05■□□□□ 0.48
PDLIM4-202ENST00000379018 RD3Q7Z3Z2 195 aa18.05■□□□□ 0.48
PDLIM4-202ENST00000379018 ZNF354CQ86Y25 554 aa18.05■□□□□ 0.48
PDLIM4-202ENST00000379018 SDR16C5Q8N3Y7 309 aa18.05■□□□□ 0.48
PDLIM4-202ENST00000379018 DENND6BQ8NEG7 585 aa18.05■□□□□ 0.48
PDLIM4-202ENST00000379018 PCDH19Q8TAB3 1148 aa18.05■□□□□ 0.48
PDLIM4-202ENST00000379018 EXTL1Q92935 676 aa18.05■□□□□ 0.48
PDLIM4-202ENST00000379018 CCDC74AQ96AQ1 378 aa18.05■□□□□ 0.48
PDLIM4-202ENST00000379018 CFAP57Q96MR6 1250 aa18.05■□□□□ 0.48
PDLIM4-202ENST00000379018 KLHL32Q96NJ5 620 aa18.05■□□□□ 0.48
PDLIM4-202ENST00000379018 DNAJC12Q9UKB3 198 aa18.05■□□□□ 0.48
PDLIM4-202ENST00000379018 SPTA1P02549 2419 aa18.05■□□□□ 0.48
PDLIM4-202ENST00000379018 LMO7DNF2Z398 122 aa18.04■□□□□ 0.48
PDLIM4-202ENST00000379018 GJB6O95452 261 aa18.04■□□□□ 0.48
PDLIM4-202ENST00000379018 ITIH2P19823 946 aa18.04■□□□□ 0.48
PDLIM4-202ENST00000379018 PON1P27169 355 aa18.04■□□□□ 0.48
PDLIM4-202ENST00000379018 FLT3P36888 993 aa18.04■□□□□ 0.48
PDLIM4-202ENST00000379018 EIF4A3P38919 411 aaKnown RBP18.04■□□□□ 0.48
PDLIM4-202ENST00000379018 SLC25A52Q3SY17 297 aa18.04■□□□□ 0.48
PDLIM4-202ENST00000379018 RAB11FIP2Q7L804 512 aa18.04■□□□□ 0.48
PDLIM4-202ENST00000379018 ZDHHC17Q8IUH5 632 aa18.04■□□□□ 0.48
PDLIM4-202ENST00000379018 HID1Q8IV36 788 aa18.04■□□□□ 0.48
PDLIM4-202ENST00000379018 NETO2Q8NC67 525 aa18.04■□□□□ 0.48
PDLIM4-202ENST00000379018 WDR48Q8TAF3 677 aa18.04■□□□□ 0.48
PDLIM4-202ENST00000379018 CXorf40AQ8TE69 158 aa18.04■□□□□ 0.48
PDLIM4-202ENST00000379018 RAB7BQ96AH8 199 aa18.04■□□□□ 0.48
PDLIM4-202ENST00000379018 C1orf74Q96LT6 269 aa18.04■□□□□ 0.48
PDLIM4-202ENST00000379018 GFM1Q96RP9 751 aaKnown RBP18.04■□□□□ 0.48
PDLIM4-202ENST00000379018 WRAP53Q9BUR4 548 aaKnown RBP18.04■□□□□ 0.48
PDLIM4-202ENST00000379018 CPEB1Q9BZB8 566 aaKnown RBP18.04■□□□□ 0.48
PDLIM4-202ENST00000379018 MBNL1Q9NR56 388 aaKnown RBP18.04■□□□□ 0.48
PDLIM4-202ENST00000379018 ZNF212Q9UDV6 495 aa18.04■□□□□ 0.48
PDLIM4-202ENST00000379018 PISDQ9UG56 409 aa18.04■□□□□ 0.48
PDLIM4-202ENST00000379018 DNAI1Q9UI46 699 aa18.04■□□□□ 0.48
PDLIM4-202ENST00000379018 RABGEF1Q9UJ41 708 aa18.04■□□□□ 0.48
PDLIM4-202ENST00000379018 ATXN7L1Q9ULK2 861 aaPredicted RBP18.04■□□□□ 0.48
PDLIM4-202ENST00000379018 FOXN3O00409 490 aaPredicted RBP18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 RIOK3O14730 519 aaKnown RBP18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 EFSO43281 561 aa18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 TM7SF2O76062 418 aa18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 CD160O95971 181 aa18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 RPLP0P05388 317 aaKnown RBP18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 CTSEP14091 401 aa18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 UGT1A5P35504 534 aa18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 CLCN1P35523 988 aa18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 CCL7P80098 99 aa18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 ATP11AP98196 1134 aa18.03■□□□□ 0.48
PDLIM4-202ENST00000379018 C1QBPQ07021 282 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms