RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 DPPA2Q7Z7J5 298 aa8.81□□□□□ -1
LIG3-202ENST00000378526 SPATA22Q8NHS9 363 aa8.81□□□□□ -1
LIG3-202ENST00000378526 TATDN2Q93075 761 aa8.81□□□□□ -1
LIG3-202ENST00000378526 PPP1R16BQ96T49 567 aa8.81□□□□□ -1
LIG3-202ENST00000378526 RMDN3Q96TC7 470 aa8.81□□□□□ -1
LIG3-202ENST00000378526 RTKNQ9BST9 563 aa8.81□□□□□ -1
LIG3-202ENST00000378526 NLNQ9BYT8 704 aa8.81□□□□□ -1
LIG3-202ENST00000378526 CXorf21Q9HAI6 301 aa8.81□□□□□ -1
LIG3-202ENST00000378526 LRRC4BQ9NT99 713 aa8.81□□□□□ -1
LIG3-202ENST00000378526 FAM149AA5PLN7 773 aa8.81□□□□□ -1
LIG3-202ENST00000378526 BCKDKO14874 412 aa8.81□□□□□ -1
LIG3-202ENST00000378526 DDX3YO15523 660 aaKnown RBP8.81□□□□□ -1
LIG3-202ENST00000378526 CCNDBP1O95273 360 aa8.81□□□□□ -1
LIG3-202ENST00000378526 PENKP01210 267 aaPredicted RBP8.81□□□□□ -1
LIG3-202ENST00000378526 CHMP24386 653 aa8.81□□□□□ -1
LIG3-202ENST00000378526 RAB30Q15771 203 aa8.81□□□□□ -1
LIG3-202ENST00000378526 FBXO43Q4G163 708 aa8.81□□□□□ -1
LIG3-202ENST00000378526 GLRA4Q5JXX5 417 aa8.81□□□□□ -1
LIG3-202ENST00000378526 PIWIL2Q8TC59 973 aaKnown RBP8.81□□□□□ -1
LIG3-202ENST00000378526 C3orf49Q96BT1 292 aa8.81□□□□□ -1
LIG3-202ENST00000378526 SLC41A3Q96GZ6 507 aa8.81□□□□□ -1
LIG3-202ENST00000378526 FAM20AQ96MK3 541 aa8.81□□□□□ -1
LIG3-202ENST00000378526 TMEM117Q9H0C3 514 aa8.81□□□□□ -1
LIG3-202ENST00000378526 AGAP1Q9UPQ3 857 aa8.81□□□□□ -1
LIG3-202ENST00000378526 OAS3Q9Y6K5 1087 aaKnown RBP8.81□□□□□ -1
LIG3-202ENST00000378526 ATAD2BQ9ULI0 1458 aa8.81□□□□□ -1
LIG3-202ENST00000378526 A0A075B6Q4 140 aa8.81□□□□□ -1
LIG3-202ENST00000378526 BBIP1A8MTZ0 92 aa8.81□□□□□ -1
LIG3-202ENST00000378526 ZNF705EA8MWA4 302 aaPredicted RBP8.81□□□□□ -1
LIG3-202ENST00000378526 H3BQF6 201 aa8.81□□□□□ -1
LIG3-202ENST00000378526 RNMTO43148 476 aaKnown RBP8.81□□□□□ -1
LIG3-202ENST00000378526 TEX33O43247 280 aa8.81□□□□□ -1
LIG3-202ENST00000378526 DGAT1O75907 488 aa8.81□□□□□ -1
LIG3-202ENST00000378526 BPNT1O95861 308 aa8.81□□□□□ -1
LIG3-202ENST00000378526 COMTP21964 271 aa8.81□□□□□ -1
LIG3-202ENST00000378526 RPL35P42766 123 aaKnown RBP8.81□□□□□ -1
LIG3-202ENST00000378526 SLC15A1P46059 708 aa8.81□□□□□ -1
LIG3-202ENST00000378526 DRG2P55039 364 aaKnown RBP8.81□□□□□ -1
LIG3-202ENST00000378526 EZH2Q15910 746 aaKnown RBP8.81□□□□□ -1
LIG3-202ENST00000378526 BATFQ16520 125 aa8.81□□□□□ -1
LIG3-202ENST00000378526 ZNF829Q3KNS6 432 aaPredicted RBP8.81□□□□□ -1
LIG3-202ENST00000378526 SLC27A3Q5K4L6 730 aa8.81□□□□□ -1
LIG3-202ENST00000378526 ATG9AQ7Z3C6 839 aa8.81□□□□□ -1
LIG3-202ENST00000378526 FAM71DQ8N9W8 422 aa8.81□□□□□ -1
LIG3-202ENST00000378526 NXPE2Q96DL1 559 aa8.81□□□□□ -1
LIG3-202ENST00000378526 C3orf14Q9HBI5 128 aa8.81□□□□□ -1
LIG3-202ENST00000378526 ZNF69Q9UC07 566 aa8.81□□□□□ -1
LIG3-202ENST00000378526 HIF3AQ9Y2N7 669 aa8.81□□□□□ -1
LIG3-202ENST00000378526 DDX3XO00571 662 aaKnown RBP eCLIP8.8□□□□□ -1
LIG3-202ENST00000378526 SNX3O60493 162 aa8.8□□□□□ -1
LIG3-202ENST00000378526 FADS2O95864 444 aaKnown RBP8.8□□□□□ -1
LIG3-202ENST00000378526 PLATP00750 562 aa8.8□□□□□ -1
LIG3-202ENST00000378526 NPPAP01160 153 aa8.8□□□□□ -1
LIG3-202ENST00000378526 IFNA21P01568 189 aa8.8□□□□□ -1
LIG3-202ENST00000378526 CYBBP04839 570 aa8.8□□□□□ -1
LIG3-202ENST00000378526 IL7P13232 177 aa8.8□□□□□ -1
LIG3-202ENST00000378526 HOXB8P17481 243 aaPredicted RBP8.8□□□□□ -1
LIG3-202ENST00000378526 PON2Q15165 354 aa8.8□□□□□ -1
LIG3-202ENST00000378526 NKAPLQ5M9Q1 402 aa8.8□□□□□ -1
LIG3-202ENST00000378526 CHIAQ9BZP6 476 aa8.8□□□□□ -1
LIG3-202ENST00000378526 DPAGT1Q9H3H5 408 aa8.8□□□□□ -1
LIG3-202ENST00000378526 NMRAL1Q9HBL8 299 aa8.8□□□□□ -1
LIG3-202ENST00000378526 KCND2Q9NZV8 630 aa8.8□□□□□ -1
LIG3-202ENST00000378526 HSPB11Q9Y547 144 aa8.8□□□□□ -1
LIG3-202ENST00000378526 NME7Q9Y5B8 376 aa8.8□□□□□ -1
LIG3-202ENST00000378526 AQRO60306 1485 aaKnown RBP eCLIP8.8□□□□□ -11e-7■■■■■ 41.1
LIG3-202ENST00000378526 WDR7Q9Y4E6 1490 aa8.8□□□□□ -1
LIG3-202ENST00000378526 ARHGEF12Q9NZN5 1544 aa8.8□□□□□ -1
LIG3-202ENST00000378526 TPPPO94811 219 aa8.8□□□□□ -1
LIG3-202ENST00000378526 ALDH1A1P00352 501 aa8.8□□□□□ -1
LIG3-202ENST00000378526 ZNF423Q2M1K9 1284 aa8.8□□□□□ -1
LIG3-202ENST00000378526 CCDC24Q8N4L8 307 aa8.8□□□□□ -1
LIG3-202ENST00000378526 URGCPQ8TCY9 931 aa8.8□□□□□ -1
LIG3-202ENST00000378526 AUTS2Q8WXX7 1259 aa8.8□□□□□ -1
LIG3-202ENST00000378526 RAD51AP1Q96B01 352 aa8.8□□□□□ -1
LIG3-202ENST00000378526 TBCDQ9BTW9 1192 aa8.8□□□□□ -1
LIG3-202ENST00000378526 POLD4Q9HCU8 107 aa8.8□□□□□ -1
LIG3-202ENST00000378526 CD320Q9NPF0 282 aa8.8□□□□□ -1
LIG3-202ENST00000378526 DPP3Q9NY33 737 aa8.8□□□□□ -1
LIG3-202ENST00000378526 MAGEL2Q9UJ55 1249 aa8.8□□□□□ -1
LIG3-202ENST00000378526 VANGL2Q9ULK5 521 aa8.8□□□□□ -1
LIG3-202ENST00000378526 CA5BQ9Y2D0 317 aa8.8□□□□□ -1
LIG3-202ENST00000378526 ABCC2Q92887 1545 aa8.8□□□□□ -1
LIG3-202ENST00000378526 DENND3A2RUS2 1198 aa8.8□□□□□ -1
LIG3-202ENST00000378526 TAF5LO75529 589 aa8.8□□□□□ -1
LIG3-202ENST00000378526 MAP3K6O95382 1288 aa8.8□□□□□ -1
LIG3-202ENST00000378526 H6PDO95479 791 aa8.8□□□□□ -1
LIG3-202ENST00000378526 CRTAMO95727 393 aa8.8□□□□□ -1
LIG3-202ENST00000378526 CHST15Q7LFX5 561 aaPredicted RBP8.8□□□□□ -1
LIG3-202ENST00000378526 GOLM1Q8NBJ4 401 aa8.8□□□□□ -1
LIG3-202ENST00000378526 TCP10LQ8TDR4 215 aa8.8□□□□□ -1
LIG3-202ENST00000378526 SLC47A1Q96FL8 570 aa8.8□□□□□ -1
LIG3-202ENST00000378526 NODALQ96S42 347 aa8.8□□□□□ -1
LIG3-202ENST00000378526 PSD2Q9BQI7 771 aa8.8□□□□□ -1
LIG3-202ENST00000378526 SYT4Q9H2B2 425 aa8.8□□□□□ -1
LIG3-202ENST00000378526 CYP4F12Q9HCS2 524 aa8.8□□□□□ -1
LIG3-202ENST00000378526 SAMHD1Q9Y3Z3 626 aaKnown RBP8.8□□□□□ -1
LIG3-202ENST00000378526 ALG6Q9Y672 507 aa8.8□□□□□ -1
LIG3-202ENST00000378526 USP19O94966 1318 aa8.8□□□□□ -1
LIG3-202ENST00000378526 CUL7Q14999 1698 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms