RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 PCDHA3Q9Y5H8 950 aa20.8■□□□□ 0.92
TRIM13-203ENST00000378183 TBC1D3DA0A087WVF3 549 aa20.79■□□□□ 0.92
TRIM13-203ENST00000378183 TBC1D3IA0A087WXS9 549 aa20.79■□□□□ 0.92
TRIM13-203ENST00000378183 TBC1D3EA0A087X179 549 aa20.79■□□□□ 0.92
TRIM13-203ENST00000378183 TBC1D3KA0A087X1G2 549 aa20.79■□□□□ 0.92
TRIM13-203ENST00000378183 TBC1D3FA6NER0 549 aaPredicted RBP20.79■□□□□ 0.92
TRIM13-203ENST00000378183 C16orf96A6NNT2 1141 aa20.79■□□□□ 0.92
TRIM13-203ENST00000378183 TBC1D3LB9A6J9 549 aa20.79■□□□□ 0.92
TRIM13-203ENST00000378183 APOL1O14791 398 aa20.79■□□□□ 0.92
TRIM13-203ENST00000378183 PIGNO95427 931 aa20.79■□□□□ 0.92
TRIM13-203ENST00000378183 TBC1D3HP0C7X1 549 aa20.79■□□□□ 0.92
TRIM13-203ENST00000378183 KRT10P13645 584 aa20.79■□□□□ 0.92
TRIM13-203ENST00000378183 CTNNA2P26232 953 aa20.79■□□□□ 0.92
TRIM13-203ENST00000378183 PEX5P50542 639 aa20.79■□□□□ 0.92
TRIM13-203ENST00000378183 IRX4P78413 519 aa20.79■□□□□ 0.92
TRIM13-203ENST00000378183 ADCY2Q08462 1091 aa20.79■□□□□ 0.92
TRIM13-203ENST00000378183 NSUN2Q08J23 767 aaKnown RBP eCLIP20.79■□□□□ 0.92
TRIM13-203ENST00000378183 LLGL1Q15334 1064 aa20.79■□□□□ 0.92
TRIM13-203ENST00000378183 IFI16Q16666 785 aaKnown RBP20.79■□□□□ 0.92
TRIM13-203ENST00000378183 ODF2Q5BJF6 829 aa20.79■□□□□ 0.92
TRIM13-203ENST00000378183 TBC1D3GQ6DHY5 549 aa20.79■□□□□ 0.92
TRIM13-203ENST00000378183 TBC1D3CQ6IPX1 549 aa20.79■□□□□ 0.92
TRIM13-203ENST00000378183 NPNTQ6UXI9 565 aa20.79■□□□□ 0.92
TRIM13-203ENST00000378183 RCOR2Q8IZ40 523 aa20.79■□□□□ 0.92
TRIM13-203ENST00000378183 TBC1D3Q8IZP1 549 aaPredicted RBP20.79■□□□□ 0.92
TRIM13-203ENST00000378183 TEX26Q8N6G2 289 aa20.79■□□□□ 0.92
TRIM13-203ENST00000378183 EXD1Q8NHP7 514 aa20.79■□□□□ 0.92
TRIM13-203ENST00000378183 SNX19Q92543 992 aa20.79■□□□□ 0.92
TRIM13-203ENST00000378183 TTC24A2A3L6 582 aaPredicted RBP20.78■□□□□ 0.92
TRIM13-203ENST00000378183 KHNYNO15037 678 aaKnown RBP20.78■□□□□ 0.92
TRIM13-203ENST00000378183 ZRANB2O95218 330 aaKnown RBP eCLIP20.78■□□□□ 0.92
TRIM13-203ENST00000378183 ADRB3P13945 408 aa20.78■□□□□ 0.92
TRIM13-203ENST00000378183 CCNCP24863 283 aa20.78■□□□□ 0.92
TRIM13-203ENST00000378183 CCR5P51681 352 aa20.78■□□□□ 0.92
TRIM13-203ENST00000378183 NEK3P51956 506 aa20.78■□□□□ 0.92
TRIM13-203ENST00000378183 RAD51Q06609 339 aa20.78■□□□□ 0.92
TRIM13-203ENST00000378183 DUOXA1Q1HG43 343 aa20.78■□□□□ 0.92
TRIM13-203ENST00000378183 TRIM61Q5EBN2 209 aa20.78■□□□□ 0.92
TRIM13-203ENST00000378183 SLC23A3Q6PIS1 610 aa20.78■□□□□ 0.92
TRIM13-203ENST00000378183 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.78■□□□□ 0.92
TRIM13-203ENST00000378183 MAML1Q92585 1016 aa20.78■□□□□ 0.92
TRIM13-203ENST00000378183 MIR1-1HGQ9H1L0 117 aa20.78■□□□□ 0.92
TRIM13-203ENST00000378183 FSCN3Q9NQT6 498 aa20.78■□□□□ 0.92
TRIM13-203ENST00000378183 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.78■□□□□ 0.92
TRIM13-203ENST00000378183 HEY1Q9Y5J3 304 aa20.78■□□□□ 0.92
TRIM13-203ENST00000378183 CAPN6Q9Y6Q1 641 aa20.78■□□□□ 0.92
TRIM13-203ENST00000378183 DMXL1Q9Y485 3027 aa20.77■□□□□ 0.92
TRIM13-203ENST00000378183 hCG_1818297A0A087WSY0 165 aa20.77■□□□□ 0.92
TRIM13-203ENST00000378183 MATN3O15232 486 aa20.77■□□□□ 0.92
TRIM13-203ENST00000378183 SPINT1O43278 529 aa20.77■□□□□ 0.92
TRIM13-203ENST00000378183 GDF9O60383 454 aa20.77■□□□□ 0.92
TRIM13-203ENST00000378183 ZFXP17010 805 aaPredicted RBP20.77■□□□□ 0.92
TRIM13-203ENST00000378183 CR2P20023 1033 aa20.77■□□□□ 0.92
TRIM13-203ENST00000378183 MX2P20592 715 aa20.77■□□□□ 0.92
TRIM13-203ENST00000378183 CD27P26842 260 aa20.77■□□□□ 0.92
TRIM13-203ENST00000378183 ABL2P42684 1182 aa20.77■□□□□ 0.92
TRIM13-203ENST00000378183 RENBPP51606 427 aa20.77■□□□□ 0.92
TRIM13-203ENST00000378183 DYNLT1P63172 113 aa20.77■□□□□ 0.92
TRIM13-203ENST00000378183 ZNF235Q14590 738 aa20.77■□□□□ 0.92
TRIM13-203ENST00000378183 MARC1Q5VT66 337 aa20.77■□□□□ 0.92
TRIM13-203ENST00000378183 FBXL19Q6PCT2 694 aa20.77■□□□□ 0.92
TRIM13-203ENST00000378183 CAMK1DQ8IU85 385 aa20.77■□□□□ 0.92
TRIM13-203ENST00000378183 ZCCHC9Q8N567 271 aaKnown RBP20.77■□□□□ 0.92
TRIM13-203ENST00000378183 CEP76Q8TAP6 659 aa20.77■□□□□ 0.92
TRIM13-203ENST00000378183 ALG3Q92685 438 aa20.77■□□□□ 0.92
TRIM13-203ENST00000378183 FATE1Q969F0 183 aa20.77■□□□□ 0.92
TRIM13-203ENST00000378183 HDAC11Q96DB2 347 aa20.77■□□□□ 0.92
TRIM13-203ENST00000378183 OLFM3Q96PB7 478 aa20.77■□□□□ 0.92
TRIM13-203ENST00000378183 LGMNQ99538 433 aa20.77■□□□□ 0.92
TRIM13-203ENST00000378183 MGME1Q9BQP7 344 aa20.77■□□□□ 0.92
TRIM13-203ENST00000378183 CAPN10Q9HC96 672 aa20.77■□□□□ 0.92
TRIM13-203ENST00000378183 PREBQ9HCU5 417 aa20.77■□□□□ 0.92
TRIM13-203ENST00000378183 FADS3Q9Y5Q0 445 aa20.77■□□□□ 0.92
TRIM13-203ENST00000378183 A0A1W2PPC4 97 aa20.76■□□□□ 0.91
TRIM13-203ENST00000378183 LNP1A1A4G5 178 aa20.76■□□□□ 0.91
TRIM13-203ENST00000378183 LATO43561 262 aa20.76■□□□□ 0.91
TRIM13-203ENST00000378183 CST8O60676 142 aa20.76■□□□□ 0.91
TRIM13-203ENST00000378183 RNGTTO60942 597 aaKnown RBP20.76■□□□□ 0.91
TRIM13-203ENST00000378183 SERPINF2P08697 491 aa20.76■□□□□ 0.91
TRIM13-203ENST00000378183 TIMP2P16035 220 aa20.76■□□□□ 0.91
TRIM13-203ENST00000378183 MMP13P45452 471 aa20.76■□□□□ 0.91
TRIM13-203ENST00000378183 SCNN1BP51168 640 aa20.76■□□□□ 0.91
TRIM13-203ENST00000378183 MAXP61244 160 aa20.76■□□□□ 0.91
TRIM13-203ENST00000378183 CCDC15Q0P6D6 951 aa20.76■□□□□ 0.91
TRIM13-203ENST00000378183 HNRNPDQ14103 355 aaKnown RBP20.76■□□□□ 0.91
TRIM13-203ENST00000378183 TFDP3Q5H9I0 405 aa20.76■□□□□ 0.91
TRIM13-203ENST00000378183 KAZNQ674X7 775 aa20.76■□□□□ 0.91
TRIM13-203ENST00000378183 TIGD7Q6NT04 549 aaPredicted RBP20.76■□□□□ 0.91
TRIM13-203ENST00000378183 TRIM69Q86WT6 500 aa20.76■□□□□ 0.91
TRIM13-203ENST00000378183 RNF10Q8N5U6 811 aaKnown RBP20.76■□□□□ 0.91
TRIM13-203ENST00000378183 C12orf50Q8NA57 414 aaPredicted RBP20.76■□□□□ 0.91
TRIM13-203ENST00000378183 NSMCE1Q8WV22 266 aa20.76■□□□□ 0.91
TRIM13-203ENST00000378183 RBM41Q96IZ5 413 aaKnown RBP20.76■□□□□ 0.91
TRIM13-203ENST00000378183 TUBGCP5Q96RT8 1024 aa20.76■□□□□ 0.91
TRIM13-203ENST00000378183 HERPUD2Q9BSE4 406 aa20.76■□□□□ 0.91
TRIM13-203ENST00000378183 SUV39H2Q9H5I1 410 aa20.76■□□□□ 0.91
TRIM13-203ENST00000378183 SAE1Q9UBE0 346 aaPredicted RBP20.76■□□□□ 0.91
TRIM13-203ENST00000378183 DKK3Q9UBP4 350 aa20.76■□□□□ 0.91
TRIM13-203ENST00000378183 AMFRQ9UKV5 643 aa20.76■□□□□ 0.91
TRIM13-203ENST00000378183 GUCA1BQ9UMX6 200 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms