RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 ELFN1P0C7U0 828 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 UQCRBP14927 111 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 SMPD1P17405 629 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 CHRNB3Q05901 458 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 NPNTQ6UXI9 565 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 TMC3Q7Z5M5 1100 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 CENPLQ8N0S6 344 aaPredicted RBP10.92□□□□□ -0.66
HIF3A-205ENST00000377670 TSEN2Q8NCE0 465 aaKnown RBP10.92□□□□□ -0.66
HIF3A-205ENST00000377670 AGAP11Q8TF27 550 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 SNED1Q8TER0 1413 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 SUPT7LO94864 414 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 NPR3P17342 541 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 CCND3P30281 292 aaPredicted RBP10.92□□□□□ -0.66
HIF3A-205ENST00000377670 BMPR2Q13873 1038 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 CCNG2Q16589 344 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 USP39Q53GS9 565 aaKnown RBP10.92□□□□□ -0.66
HIF3A-205ENST00000377670 SIAH1Q8IUQ4 282 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 FAM9CQ8IZT9 166 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 A0A0A6YYK5 440 aaPredicted RBP10.92□□□□□ -0.66
HIF3A-205ENST00000377670 USP12O75317 370 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 CST3P01034 146 aaPredicted RBP10.92□□□□□ -0.66
HIF3A-205ENST00000377670 HSMCR30P0CW71 290 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 JAK1P23458 1154 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 GSTT1P30711 240 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 C1QBPQ07021 282 aaKnown RBP10.92□□□□□ -0.66
HIF3A-205ENST00000377670 FOXM1Q08050 763 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 ZNHIT3Q15649 155 aaPredicted RBP10.92□□□□□ -0.66
HIF3A-205ENST00000377670 XKR4Q5GH76 650 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 ESRP1Q6NXG1 681 aaKnown RBP10.92□□□□□ -0.66
HIF3A-205ENST00000377670 HOMEZQ8IX15 550 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 TIFAQ96CG3 184 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 GRIP2Q9C0E4 1043 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 PSMB9P28065 219 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 RPA3P35244 121 aaPredicted RBP10.91□□□□□ -0.66
HIF3A-205ENST00000377670 FMO1Q01740 532 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 NFYCQ13952 458 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 GALNTL6Q49A17 601 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 ZC3H12AQ5D1E8 599 aaKnown RBP10.91□□□□□ -0.66
HIF3A-205ENST00000377670 TBCELQ5QJ74 424 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 ARMCX6Q7L4S7 300 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 IRF2BP2Q7Z5L9 587 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 ZCCHC7Q8N3Z6 543 aaKnown RBP10.91□□□□□ -0.66
HIF3A-205ENST00000377670 OXNAD1Q96HP4 312 aaPredicted RBP10.91□□□□□ -0.66
HIF3A-205ENST00000377670 PWWP2AQ96N64 755 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 FRMD8Q9BZ67 464 aaPredicted RBP10.91□□□□□ -0.66
HIF3A-205ENST00000377670 OSBPL6Q9BZF3 934 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 REXO4Q9GZR2 422 aaKnown RBP10.91□□□□□ -0.66
HIF3A-205ENST00000377670 FAM192AQ9GZU8 254 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 PIF1Q9H611 641 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 ARFGEF2Q9Y6D5 1785 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 ANKDD1BA6NHY2 528 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 FCHO1O14526 889 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 MFN2O95140 757 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 OR6A2O95222 327 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 CATP04040 527 aaKnown RBP10.91□□□□□ -0.66
HIF3A-205ENST00000377670 PAEPP09466 180 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 ELMO1Q92556 727 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 LRRC40Q9H9A6 602 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 KLHL28Q9NXS3 571 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 ARMCX1Q9P291 453 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 ENTPD4Q9Y227 616 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 OR10H2O60403 315 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 FYNP06241 537 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 SPIDRQ14159 915 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 ZNF184Q99676 751 aaPredicted RBP10.91□□□□□ -0.66
HIF3A-205ENST00000377670 C6orf62Q9GZU0 229 aaPredicted RBP10.91□□□□□ -0.66
HIF3A-205ENST00000377670 TLR9Q9NR96 1032 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 SLC45A1Q9Y2W3 748 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 CCNT2O60583 730 aaKnown RBP10.91□□□□□ -0.66
HIF3A-205ENST00000377670 EOMESO95936 686 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 ILF3Q12906 894 aaKnown RBP eCLIP10.91□□□□□ -0.66
HIF3A-205ENST00000377670 ACAP2Q15057 778 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 KREMEN1Q96MU8 473 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 MLPHQ9BV36 600 aaPredicted RBP10.91□□□□□ -0.66
HIF3A-205ENST00000377670 FRMD8P1Q9BZ68 369 aaPredicted RBP10.91□□□□□ -0.66
HIF3A-205ENST00000377670 RMND5AQ9H871 391 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 CYP4F12Q9HCS2 524 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 IARS2Q9NSE4 1012 aaKnown RBP10.91□□□□□ -0.66
HIF3A-205ENST00000377670 FGF10O15520 208 aaPredicted RBP10.91□□□□□ -0.66
HIF3A-205ENST00000377670 COX7A2P14406 83 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 RGS1Q08116 209 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 GRM3Q14832 879 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 TBC1D25Q3MII6 688 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 WDR45BQ5MNZ6 344 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 HYIQ5T013 277 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 ZNF248Q8NDW4 579 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 SLC9A7Q96T83 725 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 OSBPL10Q9BXB5 764 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 TRIM8Q9BZR9 551 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 GDF3Q9NR23 364 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 ZNF214Q9UL59 606 aaPredicted RBP10.91□□□□□ -0.66
HIF3A-205ENST00000377670 SNX8Q9Y5X2 465 aa10.91□□□□□ -0.66
HIF3A-205ENST00000377670 SETD1AO15047 1707 aaKnown RBP10.9□□□□□ -0.66
HIF3A-205ENST00000377670 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.9□□□□□ -0.66
HIF3A-205ENST00000377670 CPED1A4D0V7 1026 aa10.9□□□□□ -0.66
HIF3A-205ENST00000377670 PPP2R1BP30154 601 aa10.9□□□□□ -0.66
HIF3A-205ENST00000377670 BLKP51451 505 aa10.9□□□□□ -0.66
HIF3A-205ENST00000377670 ZNF135P52742 658 aaPredicted RBP10.9□□□□□ -0.66
HIF3A-205ENST00000377670 PTENP60484 403 aa10.9□□□□□ -0.66
HIF3A-205ENST00000377670 TRAF2Q12933 501 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms