RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 PAK4O96013 591 aaPredicted RBP19.48■□□□□ 0.71
CBWD3-204ENST00000377349 RFC1P35251 1148 aaPredicted RBP19.48■□□□□ 0.71
CBWD3-204ENST00000377349 ADRA1BP35368 520 aa19.48■□□□□ 0.71
CBWD3-204ENST00000377349 ACTN2P35609 894 aa19.48■□□□□ 0.71
CBWD3-204ENST00000377349 ACVRL1P37023 503 aa19.48■□□□□ 0.71
CBWD3-204ENST00000377349 RPS21P63220 83 aaKnown RBP19.48■□□□□ 0.71
CBWD3-204ENST00000377349 SLC20A2Q08357 652 aa19.48■□□□□ 0.71
CBWD3-204ENST00000377349 CCDC173Q0VFZ6 552 aa19.48■□□□□ 0.71
CBWD3-204ENST00000377349 CARD16Q5EG05 197 aa19.48■□□□□ 0.71
CBWD3-204ENST00000377349 KIAA1161Q6NSJ0 714 aa19.48■□□□□ 0.71
CBWD3-204ENST00000377349 RETSATQ6NUM9 610 aa19.48■□□□□ 0.71
CBWD3-204ENST00000377349 ARCQ7LC44 396 aa19.48■□□□□ 0.71
CBWD3-204ENST00000377349 ZNF548Q8NEK5 533 aaPredicted RBP19.48■□□□□ 0.71
CBWD3-204ENST00000377349 FAM174AQ8TBP5 190 aa19.48■□□□□ 0.71
CBWD3-204ENST00000377349 HIC2Q96JB3 615 aa19.48■□□□□ 0.71
CBWD3-204ENST00000377349 MCEEQ96PE7 176 aa19.48■□□□□ 0.71
CBWD3-204ENST00000377349 HEPHQ9BQS7 1158 aa19.48■□□□□ 0.71
CBWD3-204ENST00000377349 MAGEB5Q9BZ81 275 aa19.48■□□□□ 0.71
CBWD3-204ENST00000377349 DNAJC28Q9NX36 388 aa19.48■□□□□ 0.71
CBWD3-204ENST00000377349 CSF2P04141 144 aa19.47■□□□□ 0.71
CBWD3-204ENST00000377349 GP1BAP07359 652 aa19.47■□□□□ 0.71
CBWD3-204ENST00000377349 CCDC172P0C7W6 258 aa19.47■□□□□ 0.71
CBWD3-204ENST00000377349 NME1P15531 152 aaKnown RBP19.47■□□□□ 0.71
CBWD3-204ENST00000377349 FERP16591 822 aa19.47■□□□□ 0.71
CBWD3-204ENST00000377349 GKP32189 559 aa19.47■□□□□ 0.71
CBWD3-204ENST00000377349 ABL2P42684 1182 aa19.47■□□□□ 0.71
CBWD3-204ENST00000377349 PTP4A2Q12974 167 aa19.47■□□□□ 0.71
CBWD3-204ENST00000377349 FILIP1LQ4L180 1135 aa19.47■□□□□ 0.71
CBWD3-204ENST00000377349 LEKR1Q6ZMV7 388 aa19.47■□□□□ 0.71
CBWD3-204ENST00000377349 APTXQ7Z2E3 356 aaKnown RBP19.47■□□□□ 0.71
CBWD3-204ENST00000377349 DCP2Q8IU60 420 aaKnown RBP19.47■□□□□ 0.71
CBWD3-204ENST00000377349 C1QTNF2Q9BXJ5 285 aa19.47■□□□□ 0.71
CBWD3-204ENST00000377349 GGT7Q9UJ14 662 aa19.47■□□□□ 0.71
CBWD3-204ENST00000377349 ARHGEF17Q96PE2 2063 aaPredicted RBP19.47■□□□□ 0.71
CBWD3-204ENST00000377349 SCN8AQ9UQD0 1980 aa19.47■□□□□ 0.71
CBWD3-204ENST00000377349 A0A1W2PNU3 283 aaPredicted RBP19.46■□□□□ 0.71
CBWD3-204ENST00000377349 SMTNL1A8MU46 457 aa19.46■□□□□ 0.71
CBWD3-204ENST00000377349 FAM72CH0Y354 149 aa19.46■□□□□ 0.71
CBWD3-204ENST00000377349 DXOO77932 396 aaKnown RBP19.46■□□□□ 0.71
CBWD3-204ENST00000377349 MPOP05164 745 aa19.46■□□□□ 0.71
CBWD3-204ENST00000377349 PTPN9P43378 593 aa19.46■□□□□ 0.71
CBWD3-204ENST00000377349 HDAC4P56524 1084 aa19.46■□□□□ 0.71
CBWD3-204ENST00000377349 HNRNPKP61978 463 aaKnown RBP eCLIP19.46■□□□□ 0.71
CBWD3-204ENST00000377349 HS1BP3Q53T59 392 aa19.46■□□□□ 0.71
CBWD3-204ENST00000377349 FAM72AQ5TYM5 149 aa19.46■□□□□ 0.71
CBWD3-204ENST00000377349 FAM72DQ6L9T8 149 aa19.46■□□□□ 0.71
CBWD3-204ENST00000377349 DCUN1D2Q6PH85 259 aa19.46■□□□□ 0.71
CBWD3-204ENST00000377349 WDR59Q6PJI9 974 aa19.46■□□□□ 0.71
CBWD3-204ENST00000377349 MON1BQ7L1V2 547 aa19.46■□□□□ 0.71
CBWD3-204ENST00000377349 STRADAQ7RTN6 431 aa19.46■□□□□ 0.71
CBWD3-204ENST00000377349 NLRP14Q86W24 1093 aa19.46■□□□□ 0.71
CBWD3-204ENST00000377349 FAM72BQ86X60 149 aa19.46■□□□□ 0.71
CBWD3-204ENST00000377349 PHF13Q86YI8 300 aaPredicted RBP19.46■□□□□ 0.71
CBWD3-204ENST00000377349 C3orf20Q8ND61 904 aa19.46■□□□□ 0.71
CBWD3-204ENST00000377349 TBC1D31Q96DN5 1066 aa19.46■□□□□ 0.71
CBWD3-204ENST00000377349 FEM1CQ96JP0 617 aa19.46■□□□□ 0.71
CBWD3-204ENST00000377349 TM6SF2Q9BZW4 377 aa19.46■□□□□ 0.71
CBWD3-204ENST00000377349 ZDHHC6Q9H6R6 413 aa19.46■□□□□ 0.71
CBWD3-204ENST00000377349 CXorf51AA0A1B0GTR3 108 aa19.45■□□□□ 0.7
CBWD3-204ENST00000377349 CCP110O43303 1012 aa19.45■□□□□ 0.7
CBWD3-204ENST00000377349 PLEKP08567 350 aaPredicted RBP19.45■□□□□ 0.7
CBWD3-204ENST00000377349 ALPPL2P10696 532 aa19.45■□□□□ 0.7
CBWD3-204ENST00000377349 TNFAIP3P21580 790 aa19.45■□□□□ 0.7
CBWD3-204ENST00000377349 NRG1Q02297 640 aaPredicted RBP19.45■□□□□ 0.7
CBWD3-204ENST00000377349 GPR155Q7Z3F1 870 aa19.45■□□□□ 0.7
CBWD3-204ENST00000377349 PARGQ86W56 976 aa19.45■□□□□ 0.7
CBWD3-204ENST00000377349 PLPP6Q8IY26 295 aa19.45■□□□□ 0.7
CBWD3-204ENST00000377349 OR6K2Q8NGY2 324 aa19.45■□□□□ 0.7
CBWD3-204ENST00000377349 ISG20Q96AZ6 181 aaKnown RBP19.45■□□□□ 0.7
CBWD3-204ENST00000377349 LENG8Q96PV6 779 aaPredicted RBP19.45■□□□□ 0.7
CBWD3-204ENST00000377349 DEPDC7Q96QD5 511 aa19.45■□□□□ 0.7
CBWD3-204ENST00000377349 USP29Q9HBJ7 922 aa19.45■□□□□ 0.7
CBWD3-204ENST00000377349 HECAQ9UBI9 543 aaPredicted RBP19.45■□□□□ 0.7
CBWD3-204ENST00000377349 PNMA8BQ9ULN7 279 aaPredicted RBP19.45■□□□□ 0.7
CBWD3-204ENST00000377349 ITM2BQ9Y287 266 aa19.45■□□□□ 0.7
CBWD3-204ENST00000377349 NEMP2A6NFY4 417 aa19.44■□□□□ 0.7
CBWD3-204ENST00000377349 IGLON5A6NGN9 336 aa19.44■□□□□ 0.7
CBWD3-204ENST00000377349 LRRC10BA6NIK2 292 aa19.44■□□□□ 0.7
CBWD3-204ENST00000377349 LRRC53A6NM62 1247 aa19.44■□□□□ 0.7
CBWD3-204ENST00000377349 ATMINO43313 823 aaPredicted RBP19.44■□□□□ 0.7
CBWD3-204ENST00000377349 CREB3O43889 395 aa19.44■□□□□ 0.7
CBWD3-204ENST00000377349 CSO75390 466 aaKnown RBP19.44■□□□□ 0.7
CBWD3-204ENST00000377349 LRIG2O94898 1065 aa19.44■□□□□ 0.7
CBWD3-204ENST00000377349 DESP17661 470 aa19.44■□□□□ 0.7
CBWD3-204ENST00000377349 RABIFP47224 123 aa19.44■□□□□ 0.7
CBWD3-204ENST00000377349 ZNF165P49910 485 aa19.44■□□□□ 0.7
CBWD3-204ENST00000377349 PFN3P60673 137 aa19.44■□□□□ 0.7
CBWD3-204ENST00000377349 GABREP78334 506 aa19.44■□□□□ 0.7
CBWD3-204ENST00000377349 EIF2B5Q13144 721 aaKnown RBP19.44■□□□□ 0.7
CBWD3-204ENST00000377349 ASIC2Q16515 512 aa19.44■□□□□ 0.7
CBWD3-204ENST00000377349 EFHC2Q5JST6 749 aa19.44■□□□□ 0.7
CBWD3-204ENST00000377349 SLFN11Q7Z7L1 901 aa19.44■□□□□ 0.7
CBWD3-204ENST00000377349 PYROXD2Q8N2H3 581 aa19.44■□□□□ 0.7
CBWD3-204ENST00000377349 LSM14AQ8ND56 463 aaKnown RBP19.44■□□□□ 0.7
CBWD3-204ENST00000377349 IFI44Q8TCB0 444 aa19.44■□□□□ 0.7
CBWD3-204ENST00000377349 ARHGEF2Q92974 986 aaKnown RBP19.44■□□□□ 0.7
CBWD3-204ENST00000377349 ZNF578Q96N58 590 aaPredicted RBP19.44■□□□□ 0.7
CBWD3-204ENST00000377349 DUSP23Q9BVJ7 150 aa19.44■□□□□ 0.7
CBWD3-204ENST00000377349 ASCL3Q9NQ33 180 aa19.44■□□□□ 0.7
CBWD3-204ENST00000377349 HPCAL4Q9UM19 191 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms