RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 EPS8Q12929 822 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 LRRC73Q5JTD7 316 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 ACSM2BQ68CK6 577 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 ANKRD52Q8NB46 1076 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 ATAD1Q8NBU5 361 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 BSNDQ8WZ55 320 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 MIEF2Q96C03 454 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 REXO4Q9GZR2 422 aaKnown RBP17.3■□□□□ 0.36
MCF2L-203ENST00000375604 SPRTNQ9H040 489 aaPredicted RBP17.3■□□□□ 0.36
MCF2L-203ENST00000375604 ADGRB1O14514 1584 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 ZW10O43264 779 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 BMP6P22004 513 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 HK2P52789 917 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 ATP1A4Q13733 1029 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 FAM20CQ8IXL6 584 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 C1QTNF7Q9BXJ2 289 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 TSC22D4Q9Y3Q8 395 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 ACRP10323 421 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 TFEBP19484 476 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 CLCNKBP51801 687 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 NEK3P51956 506 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 MRPS5P82675 430 aaKnown RBP17.3■□□□□ 0.36
MCF2L-203ENST00000375604 FSTL1Q12841 308 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 TAF5Q15542 800 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 PTPRNQ16849 979 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 PABPC1P11940 636 aaKnown RBP17.3■□□□□ 0.36
MCF2L-203ENST00000375604 SEMG2Q02383 582 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 ALYREFQ86V81 257 aaKnown RBP17.3■□□□□ 0.36
MCF2L-203ENST00000375604 MBOAT7Q96N66 472 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 IL22Q9GZX6 179 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 GULP1Q9UBP9 304 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 AGO1Q9UL18 857 aaKnown RBP17.3■□□□□ 0.36
MCF2L-203ENST00000375604 NRG1Q02297 640 aaPredicted RBP17.3■□□□□ 0.36
MCF2L-203ENST00000375604 DGCR6Q14129 220 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 ARSHQ5FYA8 562 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 HYIQ5T013 277 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 DCLRE1AQ6PJP8 1040 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 R3HCC1LQ7Z5L2 792 aaKnown RBP17.3■□□□□ 0.36
MCF2L-203ENST00000375604 FAM35AQ86V20 835 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 RNFT2Q96EX2 444 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 PCDHB9Q9Y5E1 797 aa17.3■□□□□ 0.36
MCF2L-203ENST00000375604 RPL17P18621 184 aaKnown RBP17.29■□□□□ 0.36
MCF2L-203ENST00000375604 TM4SF1P30408 202 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 ZSWIM7Q19AV6 140 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 FAM45BPQ6NSW5 357 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 PLPPR4Q7Z2D5 763 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 ZNF276Q8N554 614 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 C19orf18Q8NEA5 215 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 CERS2Q96G23 380 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 PSMD11O00231 422 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 CLPTM1O96005 669 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 ANXA5P08758 320 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 NTSP30990 170 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 NAGLUP54802 743 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 C21orf59P57076 290 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 ZNF57Q68EA5 555 aaPredicted RBP17.29■□□□□ 0.36
MCF2L-203ENST00000375604 HDAC10Q969S8 669 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 KLRG1Q96E93 195 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 FAM163AQ96GL9 167 aaPredicted RBP17.29■□□□□ 0.36
MCF2L-203ENST00000375604 IMP3Q9NV31 184 aaKnown RBP17.29■□□□□ 0.36
MCF2L-203ENST00000375604 AXIN1O15169 862 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 SLC25A14O95258 325 aaPredicted RBP17.29■□□□□ 0.36
MCF2L-203ENST00000375604 ADSLP30566 484 aaPredicted RBP17.29■□□□□ 0.36
MCF2L-203ENST00000375604 RHBDF2Q6PJF5 856 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 C10orf107Q8IVU9 208 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 CACTIN-AS1Q8N1I8 211 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 LINGO1Q96FE5 620 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 NDRG2Q9UN36 371 aaKnown RBP17.29■□□□□ 0.36
MCF2L-203ENST00000375604 USP2O75604 605 aaPredicted RBP17.29■□□□□ 0.36
MCF2L-203ENST00000375604 ERAL1O75616 437 aaKnown RBP17.29■□□□□ 0.36
MCF2L-203ENST00000375604 CABYRO75952 493 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 CDK16Q00536 496 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 B3GALT6Q96L58 329 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 FCRL2Q96LA5 508 aaPredicted RBP17.29■□□□□ 0.36
MCF2L-203ENST00000375604 SERHL2Q9H4I8 314 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 CYLDQ9NQC7 956 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 SERHLQ9NQF3 203 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 MRPL39Q9NYK5 338 aaKnown RBP17.29■□□□□ 0.36
MCF2L-203ENST00000375604 VPS51Q9UID3 782 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 CCL22O00626 93 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 CHADO15335 359 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 ITPKAP23677 461 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 RAPSNQ13702 412 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 INAQ16352 499 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 C11orf88Q6PI97 169 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 KRT77Q7Z794 578 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 FAM129CQ86XR2 697 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 DSELQ8IZU8 1212 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 GPR20Q99678 358 aa17.29■□□□□ 0.36
MCF2L-203ENST00000375604 WRAP53Q9BUR4 548 aaKnown RBP17.29■□□□□ 0.36
MCF2L-203ENST00000375604 CYP3A7-CYP3A51PA0A087WV96 503 aa17.28■□□□□ 0.36
MCF2L-203ENST00000375604 ADH1AP07327 375 aa17.28■□□□□ 0.36
MCF2L-203ENST00000375604 CYP3A7P24462 503 aa17.28■□□□□ 0.36
MCF2L-203ENST00000375604 AENQ8WTP8 325 aaKnown RBP17.28■□□□□ 0.36
MCF2L-203ENST00000375604 STBD1O95210 358 aa17.28■□□□□ 0.36
MCF2L-203ENST00000375604 FAM45AQ8TCE6 357 aa17.28■□□□□ 0.36
MCF2L-203ENST00000375604 MAGEE2Q8TD90 523 aaPredicted RBP17.28■□□□□ 0.36
MCF2L-203ENST00000375604 C9IYK1 514 aa17.28■□□□□ 0.36
MCF2L-203ENST00000375604 OR6B1O95007 311 aa17.28■□□□□ 0.36
MCF2L-203ENST00000375604 GJA9P57773 515 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms