RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 ITGB4P16144 1822 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 CCDC85CA6NKD9 419 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 IFRD1O00458 451 aaPredicted RBP18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 TMEM63AO94886 807 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 GJA1P17302 382 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 SYN1P17600 705 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 GRIA1P42261 906 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 GATMP50440 423 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 PLCL1Q15111 1095 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 CYGBQ8WWM9 190 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 PIWIL1Q96J94 861 aaKnown RBP18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 TBATAQ96M53 351 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 QKIQ96PU8 341 aaKnown RBP eCLIP18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 DNAJC8O75937 253 aaPredicted RBP18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 KRT6AP02538 564 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 KRT6BP04259 564 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 GRIA4P48058 902 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 KRT6CP48668 564 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 PRIM2P49643 509 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 RAB10P61026 200 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 LRRC8BQ6P9F7 803 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 TRMT10BQ6PF06 316 aaKnown RBP18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 ZC3H3Q8IXZ2 948 aaKnown RBP18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 STAG3L4Q8TBR4 150 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 SMG7Q92540 1137 aaKnown RBP18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 HMCESQ96FZ2 354 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 PANX3Q96QZ0 392 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 UNC93B1Q9H1C4 597 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 SNX13Q9Y5W8 968 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 SNX5Q9Y5X3 404 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 PROCP04070 461 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 UGT2B4P06133 528 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 ALOX15P16050 662 aaPredicted RBP18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 SKIV2L2P42285 1042 aaKnown RBP18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 CHRNA4P43681 627 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 GPR15P49685 360 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 NAB1Q13506 487 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 TMEM40Q8WWA1 233 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 FZD10Q9ULW2 581 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 VWA7Q9Y334 891 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 DYRK1BQ9Y463 629 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 AGPSO00116 658 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 KCNE1P15382 129 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 CDC25CP30307 473 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 SOX4Q06945 474 aaPredicted RBP18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 TBL3Q12788 808 aaKnown RBP18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 SLC1A5Q15758 541 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 CNSTQ6PJW8 725 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 PAWRQ96IZ0 340 aaKnown RBP18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 SH3BP4Q9P0V3 963 aa18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 STX18Q9P2W9 335 aaKnown RBP18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 ZFP37Q9Y6Q3 630 aaPredicted RBP18.12■□□□□ 0.49
PTPDC1-202ENST00000375360 STBD1O95210 358 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 POU5F1Q01860 360 aaKnown RBP18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 GNA12Q03113 381 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 USP4Q13107 963 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 ZNF280BQ86YH2 543 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 KYQ8NBH2 561 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 OR4L1Q8NH43 312 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 PIK3R5Q8WYR1 880 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 AZIN2Q96A70 460 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 FAXDC2Q96IV6 333 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 YY1AP1Q9H869 796 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 CYLDQ9NQC7 956 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 TMEM51Q9NW97 253 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 ANKRD6Q9Y2G4 727 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 RAD54BQ9Y620 910 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 ZBTB14O43829 449 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 SEC22BO75396 215 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 CNMDO75829 334 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 C8AP07357 584 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 PTPN3P26045 913 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 WASP42768 502 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 RPL14P50914 215 aaKnown RBP18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 LPIN1Q14693 890 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 KRT72Q14CN4 511 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 CCDC157Q569K6 752 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 DSG4Q86SJ6 1040 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 CSGALNACT1Q8TDX6 532 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 SLC44A1Q8WWI5 657 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 HAPLN2Q9GZV7 340 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 TNKS2Q9H2K2 1166 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 COL18A1P39060 1754 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 CD3EAPO15446 510 aaKnown RBP18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 PEX11AO75192 247 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 FGF1P05230 155 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 CYP2A6P11509 494 aaPredicted RBP18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 GPC1P35052 558 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 FASTKQ14296 549 aaKnown RBP18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 ESRP1Q6NXG1 681 aaKnown RBP18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 C10orf107Q8IVU9 208 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 CXorf38Q8TB03 319 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 MYCBPQ99417 103 aaPredicted RBP18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 SLC39A8Q9C0K1 460 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 BTAF1O14981 1849 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 HLA-DPA1P20036 260 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 MC4RP32245 332 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 CLCN5P51795 746 aa18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 AASDHQ4L235 1098 aaPredicted RBP18.11■□□□□ 0.49
PTPDC1-202ENST00000375360 MAMDC4Q6UXC1 1216 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms