RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 CASKIN2Q8WXE0 1202 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 NARS2Q96I59 477 aaKnown RBP6.36□□□□□ -1.39
PTPN3-202ENST00000374541 LRCH3Q96II8 777 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 TBCBQ99426 244 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 GPAMQ9HCL2 828 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 TRIM39Q9HCM9 518 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 RAD18Q9NS91 495 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 TMEM216Q9P0N5 145 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 FTSJ1Q9UET6 329 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 V9GYQ6 96 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 NR5A2O00482 541 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 ABLIM1O14639 778 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 AP5Z1O43299 807 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 SKAP2O75563 359 aaPredicted RBP6.36□□□□□ -1.39
PTPN3-202ENST00000374541 RECQL5O94762 991 aaPredicted RBP6.36□□□□□ -1.39
PTPN3-202ENST00000374541 CCDC130P13994 396 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 EPB42P16452 691 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 ALOX12P18054 663 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 POU1F1P28069 291 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 CRABP2P29373 138 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 NMT1P30419 496 aaKnown RBP6.36□□□□□ -1.39
PTPN3-202ENST00000374541 RCVRNP35243 200 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 CASP4P49662 377 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 FXR2P51116 673 aaKnown RBP eCLIP6.36□□□□□ -1.39
PTPN3-202ENST00000374541 RENBPP51606 427 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 HK2P52789 917 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 CDC42P60953 191 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 RIPPLY1Q0D2K3 151 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 ITGADQ13349 1161 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 TUSC3Q13454 348 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 QPRTQ15274 297 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 CCNG2Q16589 344 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 ALFQ53S48 1182 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 SGO1Q5FBB7 561 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 C11orf63Q6NUN7 778 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 PLPPR4Q7Z2D5 763 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 TAF8Q7Z7C8 310 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 ACOT1Q86TX2 421 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 FAM129CQ86XR2 697 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 CAMK1DQ8IU85 385 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 SLC25A41Q8N5S1 370 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 COLGALT1Q8NBJ5 622 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.36□□□□□ -1.39
PTPN3-202ENST00000374541 GRIN3AQ8TCU5 1115 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 STK32AQ8WU08 396 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 SPIRE2Q8WWL2 714 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 S100A13Q99584 98 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 KLF6Q99612 283 aaPredicted RBP6.36□□□□□ -1.39
PTPN3-202ENST00000374541 KCNF1Q9H3M0 494 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 C8orf4Q9NR00 106 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 DNMT3LQ9UJW3 386 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 GGA2Q9UJY4 613 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 GTF2A1LQ9UNN4 478 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 PLAGL2Q9UPG8 496 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 CCDC189A1A4V9 331 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 FOXD2O60548 495 aaPredicted RBP6.36□□□□□ -1.39
PTPN3-202ENST00000374541 TNFRSF21O75509 655 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 PGM3O95394 542 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 HSMCR30P0CW71 290 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 RPL17P18621 184 aaKnown RBP6.36□□□□□ -1.39
PTPN3-202ENST00000374541 TNNI3P19429 210 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 ACAT1P24752 427 aaKnown RBP6.36□□□□□ -1.39
PTPN3-202ENST00000374541 PBX3P40426 434 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 RUNDC3AQ59EK9 446 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 CRELD2Q6UXH1 353 aaPredicted RBP6.36□□□□□ -1.39
PTPN3-202ENST00000374541 MCOLN3Q8TDD5 553 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 FUT8Q9BYC5 575 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 DPY30Q9C005 99 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 RRN3Q9NYV6 651 aa6.36□□□□□ -1.39
PTPN3-202ENST00000374541 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.35□□□□□ -1.39
PTPN3-202ENST00000374541 IRGMA1A4Y4 181 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 CYP1A1P04798 512 aaPredicted RBP6.35□□□□□ -1.39
PTPN3-202ENST00000374541 H2AFXP16104 143 aaPredicted RBP6.35□□□□□ -1.39
PTPN3-202ENST00000374541 CASP1P29466 404 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 CSTF2P33240 577 aaKnown RBP eCLIP6.35□□□□□ -1.39
PTPN3-202ENST00000374541 FXR1P51114 621 aaKnown RBP eCLIP6.35□□□□□ -1.39
PTPN3-202ENST00000374541 NR1H2P55055 460 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 MYBPC2Q14324 1141 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 ITPRIPL2Q3MIP1 535 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 INTS11Q5TA45 600 aaKnown RBP6.35□□□□□ -1.39
PTPN3-202ENST00000374541 GRTP1Q5TC63 336 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 NAIF1Q69YI7 327 aaPredicted RBP6.35□□□□□ -1.39
PTPN3-202ENST00000374541 BICRALQ6AI39 1079 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 GPAT2Q6NUI2 795 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 YTHDF3Q7Z739 585 aaKnown RBP6.35□□□□□ -1.39
PTPN3-202ENST00000374541 FAM228AQ86W67 206 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 ADHFE1Q8IWW8 467 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 C8orf59Q8N0T1 100 aaPredicted RBP6.35□□□□□ -1.39
PTPN3-202ENST00000374541 LRRC17Q8N6Y2 441 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 CYP2W1Q8TAV3 490 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 SENP8Q96LD8 212 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 KLHL5Q96PQ7 755 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 CHP1Q99653 195 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 ZNF184Q99676 751 aaPredicted RBP6.35□□□□□ -1.39
PTPN3-202ENST00000374541 REEP2Q9BRK0 252 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 NUAK2Q9H093 628 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 SEMA6BQ9H3T3 888 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 ZDHHC6Q9H6R6 413 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 THAP1Q9NVV9 213 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 IGSF9Q9P2J2 1179 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms