RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 PCDHGB4Q9UN71 923 aa17.13■□□□□ 0.33
PHF1-202ENST00000374516 PCDHGB5Q9Y5G0 923 aa17.13■□□□□ 0.33
PHF1-202ENST00000374516 NLRC5Q86WI3 1866 aa17.13■□□□□ 0.33
PHF1-202ENST00000374516 IRAK2O43187 625 aa17.13■□□□□ 0.33
PHF1-202ENST00000374516 USP12O75317 370 aa17.13■□□□□ 0.33
PHF1-202ENST00000374516 TMCC1O94876 653 aa17.13■□□□□ 0.33
PHF1-202ENST00000374516 MOCS2O96007 188 aaPredicted RBP17.13■□□□□ 0.33
PHF1-202ENST00000374516 IGLV3-25P01717 112 aa17.13■□□□□ 0.33
PHF1-202ENST00000374516 CNGA3Q16281 694 aa17.13■□□□□ 0.33
PHF1-202ENST00000374516 NADK2Q4G0N4 442 aa17.13■□□□□ 0.33
PHF1-202ENST00000374516 CTXN3Q4LDR2 81 aa17.13■□□□□ 0.33
PHF1-202ENST00000374516 DCP1BQ8IZD4 617 aaKnown RBP17.13■□□□□ 0.33
PHF1-202ENST00000374516 SCML4Q8N228 414 aa17.13■□□□□ 0.33
PHF1-202ENST00000374516 METTL25Q8N6Q8 603 aa17.13■□□□□ 0.33
PHF1-202ENST00000374516 CDKL2Q92772 493 aa17.13■□□□□ 0.33
PHF1-202ENST00000374516 SCLYQ96I15 445 aa17.13■□□□□ 0.33
PHF1-202ENST00000374516 DNAJC1Q96KC8 554 aaKnown RBP17.13■□□□□ 0.33
PHF1-202ENST00000374516 STK39Q9UEW8 545 aa17.13■□□□□ 0.33
PHF1-202ENST00000374516 ADAM28Q9UKQ2 775 aa17.13■□□□□ 0.33
PHF1-202ENST00000374516 TMEM189-UBE2V1I3L0A0 370 aa17.12■□□□□ 0.33
PHF1-202ENST00000374516 HNRNPRO43390 633 aaKnown RBP17.12■□□□□ 0.33
PHF1-202ENST00000374516 PAGE1O75459 146 aa17.12■□□□□ 0.33
PHF1-202ENST00000374516 MGAT1P26572 445 aa17.12■□□□□ 0.33
PHF1-202ENST00000374516 USP4Q13107 963 aa17.12■□□□□ 0.33
PHF1-202ENST00000374516 EIF4EBP2Q13542 120 aaPredicted RBP17.12■□□□□ 0.33
PHF1-202ENST00000374516 SH2D4BQ5SQS7 431 aa17.12■□□□□ 0.33
PHF1-202ENST00000374516 EPGNQ6UW88 154 aa17.12■□□□□ 0.33
PHF1-202ENST00000374516 ISLR2Q6UXK2 745 aa17.12■□□□□ 0.33
PHF1-202ENST00000374516 FAM43BQ6ZT52 329 aaPredicted RBP17.12■□□□□ 0.33
PHF1-202ENST00000374516 ZFP28Q8NHY6 868 aa17.12■□□□□ 0.33
PHF1-202ENST00000374516 LENG8Q96PV6 779 aaPredicted RBP17.12■□□□□ 0.33
PHF1-202ENST00000374516 PACSIN3Q9UKS6 424 aa17.12■□□□□ 0.33
PHF1-202ENST00000374516 RAB26Q9ULW5 256 aa17.12■□□□□ 0.33
PHF1-202ENST00000374516 SLC27A5Q9Y2P5 690 aa17.12■□□□□ 0.33
PHF1-202ENST00000374516 PSAT1Q9Y617 370 aa17.12■□□□□ 0.33
PHF1-202ENST00000374516 E9PBE3 544 aa17.12■□□□□ 0.33
PHF1-202ENST00000374516 ZBTB24O43167 697 aaPredicted RBP17.12■□□□□ 0.33
PHF1-202ENST00000374516 KLHL41O60662 606 aa17.12■□□□□ 0.33
PHF1-202ENST00000374516 CRTAMO95727 393 aa17.12■□□□□ 0.33
PHF1-202ENST00000374516 ATN1P54259 1190 aaPredicted RBP17.12■□□□□ 0.33
PHF1-202ENST00000374516 PPIDQ08752 370 aaKnown RBP17.12■□□□□ 0.33
PHF1-202ENST00000374516 ZBTB17Q13105 803 aa17.12■□□□□ 0.33
PHF1-202ENST00000374516 BFSP2Q13515 415 aa17.12■□□□□ 0.33
PHF1-202ENST00000374516 MYBPC3Q14896 1274 aa17.12■□□□□ 0.33
PHF1-202ENST00000374516 CASD1Q96PB1 797 aa17.12■□□□□ 0.33
PHF1-202ENST00000374516 DEFB118Q96PH6 123 aa17.12■□□□□ 0.33
PHF1-202ENST00000374516 PTPRDP23468 1912 aa17.11■□□□□ 0.33
PHF1-202ENST00000374516 CPA3P15088 417 aa17.11■□□□□ 0.33
PHF1-202ENST00000374516 GARSP41250 739 aaKnown RBP17.11■□□□□ 0.33
PHF1-202ENST00000374516 METTL21CQ5VZV1 264 aa17.11■□□□□ 0.33
PHF1-202ENST00000374516 ZFRQ96KR1 1074 aaKnown RBP17.11■□□□□ 0.33
PHF1-202ENST00000374516 LRGUKQ96M69 825 aa17.11■□□□□ 0.33
PHF1-202ENST00000374516 LRFN2Q9ULH4 789 aa17.11■□□□□ 0.33
PHF1-202ENST00000374516 CDY1Q9Y6F8 540 aa17.11■□□□□ 0.33
PHF1-202ENST00000374516 CCDC160A6NGH7 325 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 ALDH2P05091 517 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 TYK2P29597 1187 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 CCR1P32246 355 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 CCL23P55773 120 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 SLC9B1Q4ZJI4 515 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 LRRC8BQ6P9F7 803 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 CES3Q6UWW8 571 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 ARHGAP36Q6ZRI8 547 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 TMEM173Q86WV6 379 aaPredicted RBP17.1■□□□□ 0.33
PHF1-202ENST00000374516 NUP93Q8N1F7 819 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 FCRL2Q96LA5 508 aaPredicted RBP17.1■□□□□ 0.33
PHF1-202ENST00000374516 TRIM62Q9BVG3 475 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 MRPS26Q9BYN8 205 aaKnown RBP17.1■□□□□ 0.33
PHF1-202ENST00000374516 RBM38Q9H0Z9 239 aaKnown RBP17.1■□□□□ 0.33
PHF1-202ENST00000374516 SMOC2Q9H3U7 446 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 ZNF358Q9NW07 568 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 ARHGEF38Q9NXL2 777 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 PLK2Q9NYY3 685 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 UBP1Q9NZI7 540 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 MAGED2Q9UNF1 606 aaPredicted RBP17.1■□□□□ 0.33
PHF1-202ENST00000374516 PCDHB12Q9Y5F1 795 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 DFFAO00273 331 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 AIM2O14862 343 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 NCAM2O15394 837 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 ATP6V1B1P15313 513 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 CD1EP15812 388 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 MX2P20592 715 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 CD68P34810 354 aaPredicted RBP17.1■□□□□ 0.33
PHF1-202ENST00000374516 GMPRP36959 345 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 SLC11A1P49279 550 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 GALNT2Q10471 571 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 NFE2Q16621 373 aaPredicted RBP17.1■□□□□ 0.33
PHF1-202ENST00000374516 MYLK3Q32MK0 819 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 HSP90AA5PQ58FG0 334 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 RARS2Q5T160 578 aaKnown RBP17.1■□□□□ 0.33
PHF1-202ENST00000374516 RSPO2Q6UXX9 243 aaPredicted RBP17.1■□□□□ 0.33
PHF1-202ENST00000374516 AHI1Q8N157 1196 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 ZNF781Q8N8C0 355 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 OR52K1Q8NGK4 314 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 USP33Q8TEY7 942 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 SERPINI1Q99574 410 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 OXCT2Q9BYC2 517 aaPredicted RBP17.1■□□□□ 0.33
PHF1-202ENST00000374516 GRIP2Q9C0E4 1043 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 CDH19Q9H159 772 aa17.1■□□□□ 0.33
PHF1-202ENST00000374516 OSBPL2Q9H1P3 480 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms