RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 ZNF189O75820 626 aaPredicted RBP11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 ABLIM3O94929 683 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 SEC24AO95486 1093 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 PROCP04070 461 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 ERBB2P04626 1255 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 DESP17661 470 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 MX2P20592 715 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 SERPINB6P35237 376 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 NUMBP49757 651 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 ABCE1P61221 599 aaKnown RBP11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 NIPAL4Q0D2K0 466 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 DUSP4Q13115 394 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 SEMA5AQ13591 1074 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 CYLC2Q14093 348 aaPredicted RBP11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 C1orf228Q6PIY5 440 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 SATL1Q86VE3 508 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 SPATA2LQ8IUW3 424 aaPredicted RBP11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 TTC39CQ8N584 583 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 SLC25A41Q8N5S1 370 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 EFHBQ8N7U6 833 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 TRPC4APQ8TEL6 797 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 TMEM176AQ96HP8 235 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 MPP4Q96JB8 637 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 ZNF778Q96MU6 729 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 CPXM1Q96SM3 734 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 ZNF670Q9BS34 389 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 MED10Q9BTT4 135 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 APOL5Q9BWW9 433 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 RBM38Q9H0Z9 239 aaKnown RBP11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 ZNF395Q9H8N7 513 aaPredicted RBP11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 MAN1C1Q9NR34 630 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 FAM49BQ9NUQ9 324 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 AFF4Q9UHB7 1163 aaKnown RBP11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 PCSK1NQ9UHG2 260 aa11.62□□□□□ -0.55
TSPAN1-201ENST00000372003 MEI4A8MW99 385 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 CLDN5O00501 218 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 VILLO15195 856 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 AVILO75366 819 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 SOAT2O75908 522 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 VNN2O95498 520 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 GLP2RO95838 553 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 TFAP2AP05549 437 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 APRTP07741 180 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 THRAP10827 490 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 COX4I1P13073 169 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 CD19P15391 556 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 NR2C2P49116 596 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 EPHB1P54762 984 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 SULT2A1Q06520 285 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 DLX2Q07687 328 aaPredicted RBP11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 ADAM15Q13444 863 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 BMPR2Q13873 1038 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 KRT81Q14533 505 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 PCLAFQ15004 111 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 NFE2Q16621 373 aaPredicted RBP11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 MGAT5BQ3V5L5 792 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 RALGPS1Q5JS13 557 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 N4BP2L1Q5TBK1 243 aaPredicted RBP11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 MROH9Q5TGP6 573 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 TPGS2Q68CL5 300 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 FAM171BQ6P995 826 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 DENND5BQ6ZUT9 1274 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 CYP4V2Q6ZWL3 525 aaPredicted RBP11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 ZNF534Q76KX8 674 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 DEFB107AQ8IZN7 70 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 CRYBG2Q8N1P7 616 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 TAB3Q8N5C8 712 aaPredicted RBP11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 TTC9BQ8N6N2 239 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 C12orf76Q8N812 135 aaPredicted RBP11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 SLC7A14Q8TBB6 771 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 SREK1Q8WXA9 508 aaKnown RBP11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 MYLPFQ96A32 169 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 ISL2Q96A47 359 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 DCUN1D1Q96GG9 259 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 PCED1BQ96HM7 432 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 CNDP1Q96KN2 507 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 PEBP4Q96S96 227 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 SORT1Q99523 831 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 PKMYT1Q99640 499 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 SEPT5Q99719 369 aaPredicted RBP11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 RHOBTB2Q9BYZ6 727 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 CRISPLD1Q9H336 500 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 EIF2B3Q9NR50 452 aaKnown RBP11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 HACD3Q9P035 362 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 CYTH4Q9UIA0 394 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 EMCNQ9ULC0 261 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 KIAA1257Q9ULG3 409 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 PCDHB5Q9Y5E4 795 aa11.61□□□□□ -0.55
TSPAN1-201ENST00000372003 C2CD4BA6NLJ0 364 aa11.6□□□□□ -0.55
TSPAN1-201ENST00000372003 MDM4O15151 490 aa11.6□□□□□ -0.55
TSPAN1-201ENST00000372003 ITM2AO43736 263 aa11.6□□□□□ -0.55
TSPAN1-201ENST00000372003 RFPL2O75678 378 aa11.6□□□□□ -0.55
TSPAN1-201ENST00000372003 C8AP07357 584 aa11.6□□□□□ -0.55
TSPAN1-201ENST00000372003 FAM200BP0CF97 657 aa11.6□□□□□ -0.55
TSPAN1-201ENST00000372003 VDRP11473 427 aa11.6□□□□□ -0.55
TSPAN1-201ENST00000372003 BDNFP23560 247 aa11.6□□□□□ -0.55
TSPAN1-201ENST00000372003 CYP2F1P24903 491 aa11.6□□□□□ -0.55
TSPAN1-201ENST00000372003 RBL1P28749 1068 aa11.6□□□□□ -0.55
TSPAN1-201ENST00000372003 ADORA2BP29275 332 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms