RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 NAGLUP54802 743 aa14.86□□□□□ -0.03
NDC1-201ENST00000371429 ZNF844Q08AG5 666 aa14.86□□□□□ -0.03
NDC1-201ENST00000371429 CRYMQ14894 314 aa14.86□□□□□ -0.03
NDC1-201ENST00000371429 USP7Q93009 1102 aa14.86□□□□□ -0.03
NDC1-201ENST00000371429 CSPG4P5Q96PW8 444 aa14.86□□□□□ -0.03
NDC1-201ENST00000371429 FAM124BQ9H5Z6 455 aaPredicted RBP14.86□□□□□ -0.03
NDC1-201ENST00000371429 GSNP06396 782 aa14.86□□□□□ -0.03
NDC1-201ENST00000371429 CRTC3Q6UUV7 619 aa14.86□□□□□ -0.03
NDC1-201ENST00000371429 TRIM69Q86WT6 500 aa14.86□□□□□ -0.03
NDC1-201ENST00000371429 OR4L1Q8NH43 312 aa14.86□□□□□ -0.03
NDC1-201ENST00000371429 EBNA1BP2Q99848 306 aaKnown RBP14.86□□□□□ -0.03
NDC1-201ENST00000371429 DPEP3Q9H4B8 488 aa14.86□□□□□ -0.03
NDC1-201ENST00000371429 AGO3Q9H9G7 860 aaKnown RBP14.86□□□□□ -0.03
NDC1-201ENST00000371429 PHPT1Q9NRX4 125 aaPredicted RBP14.86□□□□□ -0.03
NDC1-201ENST00000371429 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.86□□□□□ -0.03
NDC1-201ENST00000371429 INSL6Q9Y581 213 aa14.86□□□□□ -0.03
NDC1-201ENST00000371429 FSCN2O14926 492 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 IFNA16P05015 189 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 MC4RP32245 332 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 CCT8P50990 548 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 OLFML2BQ68BL8 750 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 RBFAQ8N0V3 343 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 COL26A1Q96A83 441 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 SNX6Q9UNH7 406 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 PARP4Q9UKK3 1724 aaKnown RBP14.85□□□□□ -0.03
NDC1-201ENST00000371429 CCDC154A6NI56 674 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.85□□□□□ -0.03
NDC1-201ENST00000371429 E9PAM4 449 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 STBD1O95210 358 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 ATP6V1C1P21283 382 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 GPM6BQ13491 265 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 PLEKHA7Q6IQ23 1121 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 ZNF621Q6ZSS3 439 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 ZFYVE1Q9HBF4 777 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 RCOR3Q9P2K3 495 aaPredicted RBP14.85□□□□□ -0.03
NDC1-201ENST00000371429 NDRG2Q9UN36 371 aaKnown RBP14.85□□□□□ -0.03
NDC1-201ENST00000371429 GSAPA4D1B5 854 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 SGTAO43765 313 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 NTSP30990 170 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 CLK1P49759 484 aaKnown RBP14.85□□□□□ -0.03
NDC1-201ENST00000371429 ADAMTSL2Q86TH1 951 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 SLC4A11Q8NBS3 891 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 NTPCRQ9BSD7 190 aaKnown RBP14.85□□□□□ -0.03
NDC1-201ENST00000371429 ZFP14Q9HCL3 533 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 EVLQ9UI08 416 aaPredicted RBP14.85□□□□□ -0.03
NDC1-201ENST00000371429 A0A1B0GVM2 712 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 RCCD1A6NED2 376 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 TCAF2A6NFQ2 919 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 HNF4AP41235 474 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 ERVK-21P61565 698 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 ALFQ53S48 1182 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 IYDQ6PHW0 289 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 IRF2BP1Q8IU81 584 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 MICU2Q8IYU8 434 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 ATG16L2Q8NAA4 619 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 TIFAQ96CG3 184 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 PRKAG3Q9UGI9 489 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 CROTQ9UKG9 612 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 GTF2A1LQ9UNN4 478 aa14.85□□□□□ -0.03
NDC1-201ENST00000371429 TRAF2Q12933 501 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 CTBP1Q13363 440 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 GNA13Q14344 377 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 TEX44Q53QW1 395 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 TMC5Q6UXY8 1006 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 BEND7Q8N7W2 519 aaPredicted RBP14.84□□□□□ -0.03
NDC1-201ENST00000371429 C2orf15Q8WU43 125 aaKnown RBP14.84□□□□□ -0.03
NDC1-201ENST00000371429 DNAJC9Q8WXX5 260 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 FIG4Q92562 907 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 FEM1CQ96JP0 617 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.84□□□□□ -0.03
NDC1-201ENST00000371429 PDE4DIPQ5VU43 2346 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 MON2Q7Z3U7 1717 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 PRNPP04156 253 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 COX7A2P14406 83 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 CCND3P30281 292 aaPredicted RBP14.84□□□□□ -0.03
NDC1-201ENST00000371429 PSMD8P48556 350 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 ELP6Q0PNE2 266 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 FOXR1Q6PIV2 292 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 RASAL3Q86YV0 1011 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 EFCAB3Q8N7B9 438 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 OR10G6Q8NH81 332 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 PAWRQ96IZ0 340 aaKnown RBP14.84□□□□□ -0.03
NDC1-201ENST00000371429 NSMCE2Q96MF7 247 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 HBS1LQ9Y450 684 aaKnown RBP14.84□□□□□ -0.03
NDC1-201ENST00000371429 CD3EAPO15446 510 aaKnown RBP14.84□□□□□ -0.03
NDC1-201ENST00000371429 PAPSS1O43252 624 aaPredicted RBP14.84□□□□□ -0.03
NDC1-201ENST00000371429 WARSP23381 471 aaKnown RBP14.84□□□□□ -0.03
NDC1-201ENST00000371429 PBX3P40426 434 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 GRB14Q14449 540 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 SRLQ86TD4 932 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 DEFB107AQ8IZN7 70 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 TRPC4APQ8TEL6 797 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 RERGQ96A58 199 aaPredicted RBP14.84□□□□□ -0.03
NDC1-201ENST00000371429 THAP11Q96EK4 314 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 PRRG3Q9BZD7 231 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 COMMD8Q9NX08 183 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 CCDC167Q9P0B6 97 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 KCNE2Q9Y6J6 123 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 ABHD14A-ACY1A0A1B0GW23 586 aa14.84□□□□□ -0.03
NDC1-201ENST00000371429 MRASO14807 208 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms