RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 MARC1Q5VT66 337 aa29.25■■■□□ 2.27
SSBP3-204ENST00000371320 SEL1L3Q68CR1 1132 aa29.25■■■□□ 2.27
SSBP3-204ENST00000371320 TMC7Q7Z402 723 aa29.25■■■□□ 2.27
SSBP3-204ENST00000371320 GPR152Q8TDT2 470 aa29.25■■■□□ 2.27
SSBP3-204ENST00000371320 SCG3Q8WXD2 468 aaKnown RBP29.25■■■□□ 2.27
SSBP3-204ENST00000371320 GPR78Q96P69 363 aa29.25■■■□□ 2.27
SSBP3-204ENST00000371320 TMEM248Q9NWD8 314 aa29.25■■■□□ 2.27
SSBP3-204ENST00000371320 HEATR9A2RTY3 570 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 CNTN5O94779 1100 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 SLC12A2P55011 1212 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 CAP1Q01518 475 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 PRKAA1Q13131 559 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 PSMD5Q16401 504 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 CTXN3Q4LDR2 81 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 TRAF7Q6Q0C0 670 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 SPATA6LQ8N4H0 392 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 ATP6V0D2Q8N8Y2 350 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 ATAD1Q8NBU5 361 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 PPFIBP2Q8ND30 876 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 GEMIN8Q9NWZ8 242 aaKnown RBP29.24■■■□□ 2.27
SSBP3-204ENST00000371320 DLX3O60479 287 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 HAPLN1P10915 354 aaPredicted RBP29.24■■■□□ 2.27
SSBP3-204ENST00000371320 COX4I1P13073 169 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 GLDCP23378 1020 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 MAGEA11P43364 429 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 ERFP50548 548 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 TAS2R39P59534 338 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 MAXP61244 160 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 KLF10Q13118 480 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 ALFQ53S48 1182 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 ZNF354CQ86Y25 554 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 FATE1Q969F0 183 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 PABPC5Q96DU9 382 aaKnown RBP29.24■■■□□ 2.27
SSBP3-204ENST00000371320 KLHL5Q96PQ7 755 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 SP110Q9HB58 689 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 GPAMQ9HCL2 828 aa29.24■■■□□ 2.27
SSBP3-204ENST00000371320 A0A087X1B8 175 aa29.23■■■□□ 2.27
SSBP3-204ENST00000371320 GOLGA8QA0A0J9YX86 632 aa29.23■■■□□ 2.27
SSBP3-204ENST00000371320 GOLGA8OA6NCC3 632 aa29.23■■■□□ 2.27
SSBP3-204ENST00000371320 GOLGA8NF8WBI6 632 aa29.23■■■□□ 2.27
SSBP3-204ENST00000371320 TBX18O95935 607 aa29.23■■■□□ 2.27
SSBP3-204ENST00000371320 CD86P42081 329 aa29.23■■■□□ 2.27
SSBP3-204ENST00000371320 ABL2P42684 1182 aa29.23■■■□□ 2.27
SSBP3-204ENST00000371320 SERPINH1P50454 418 aaKnown RBP29.23■■■□□ 2.27
SSBP3-204ENST00000371320 AP2B1P63010 937 aa29.23■■■□□ 2.27
SSBP3-204ENST00000371320 POU4F1Q01851 419 aa29.23■■■□□ 2.27
SSBP3-204ENST00000371320 SLC10A7Q0GE19 358 aa29.23■■■□□ 2.27
SSBP3-204ENST00000371320 DLG1Q12959 904 aa29.23■■■□□ 2.27
SSBP3-204ENST00000371320 KIAA0408Q6ZU52 694 aa29.23■■■□□ 2.27
SSBP3-204ENST00000371320 TTC9BQ8N6N2 239 aa29.23■■■□□ 2.27
SSBP3-204ENST00000371320 WDR55Q9H6Y2 383 aaPredicted RBP29.23■■■□□ 2.27
SSBP3-204ENST00000371320 ABT1Q9ULW3 272 aaKnown RBP29.23■■■□□ 2.27
SSBP3-204ENST00000371320 SYN3O14994 580 aa29.22■■■□□ 2.27
SSBP3-204ENST00000371320 TFEBP19484 476 aa29.22■■■□□ 2.27
SSBP3-204ENST00000371320 YWHAQP27348 245 aa29.22■■■□□ 2.27
SSBP3-204ENST00000371320 NUMBP49757 651 aa29.22■■■□□ 2.27
SSBP3-204ENST00000371320 ASPHQ12797 758 aa29.22■■■□□ 2.27
SSBP3-204ENST00000371320 CUL3Q13618 768 aa29.22■■■□□ 2.27
SSBP3-204ENST00000371320 ARMC3Q5W041 872 aa29.22■■■□□ 2.27
SSBP3-204ENST00000371320 FRMD7Q6ZUT3 714 aa29.22■■■□□ 2.27
SSBP3-204ENST00000371320 LMNTD2Q8IXW0 634 aa29.22■■■□□ 2.27
SSBP3-204ENST00000371320 ACTRT2Q8TDY3 377 aa29.22■■■□□ 2.27
SSBP3-204ENST00000371320 FBXO32Q969P5 355 aa29.22■■■□□ 2.27
SSBP3-204ENST00000371320 BTN2A3PQ96KV6 586 aa29.22■■■□□ 2.27
SSBP3-204ENST00000371320 MRPL46Q9H2W6 279 aaKnown RBP29.22■■■□□ 2.27
SSBP3-204ENST00000371320 ATP13A1Q9HD20 1204 aa29.22■■■□□ 2.27
SSBP3-204ENST00000371320 VPS45Q9NRW7 570 aa29.22■■■□□ 2.27
SSBP3-204ENST00000371320 RNF186Q9NXI6 227 aa29.22■■■□□ 2.27
SSBP3-204ENST00000371320 ANPEPP15144 967 aa29.22■■■□□ 2.27
SSBP3-204ENST00000371320 MIB1Q86YT6 1006 aa29.22■■■□□ 2.27
SSBP3-204ENST00000371320 CALML6Q8TD86 181 aa29.22■■■□□ 2.27
SSBP3-204ENST00000371320 GLT1D1Q96MS3 346 aa29.22■■■□□ 2.27
SSBP3-204ENST00000371320 UNKQ9C0B0 810 aaKnown RBP29.22■■■□□ 2.27
SSBP3-204ENST00000371320 CYP4F11Q9HBI6 524 aa29.22■■■□□ 2.27
SSBP3-204ENST00000371320 IL37Q9NZH6 218 aa29.22■■■□□ 2.27
SSBP3-204ENST00000371320 ZDHHC2Q9UIJ5 367 aa29.22■■■□□ 2.27
SSBP3-204ENST00000371320 NEMP1O14524 444 aa29.21■■■□□ 2.27
SSBP3-204ENST00000371320 CCNT2O60583 730 aaKnown RBP29.21■■■□□ 2.27
SSBP3-204ENST00000371320 CPB1P15086 417 aa29.21■■■□□ 2.27
SSBP3-204ENST00000371320 PSEN1P49768 467 aa29.21■■■□□ 2.27
SSBP3-204ENST00000371320 BLMHQ13867 455 aa29.21■■■□□ 2.27
SSBP3-204ENST00000371320 TSTD2Q5T7W7 516 aa29.21■■■□□ 2.27
SSBP3-204ENST00000371320 CNSTQ6PJW8 725 aa29.21■■■□□ 2.27
SSBP3-204ENST00000371320 SHKBP1Q8TBC3 707 aa29.21■■■□□ 2.27
SSBP3-204ENST00000371320 PSMG2Q969U7 264 aa29.21■■■□□ 2.27
SSBP3-204ENST00000371320 PPP1R36Q96LQ0 422 aa29.21■■■□□ 2.27
SSBP3-204ENST00000371320 RANBP9Q96S59 729 aa29.21■■■□□ 2.27
SSBP3-204ENST00000371320 VTI1BQ9UEU0 232 aa29.21■■■□□ 2.27
SSBP3-204ENST00000371320 ARHGAP26Q9UNA1 814 aa29.21■■■□□ 2.27
SSBP3-204ENST00000371320 IGLV3-10A0A075B6K4 115 aa29.21■■■□□ 2.27
SSBP3-204ENST00000371320 SLCO1B7G3V0H7 640 aa29.21■■■□□ 2.27
SSBP3-204ENST00000371320 LIN7AO14910 233 aaPredicted RBP29.21■■■□□ 2.27
SSBP3-204ENST00000371320 MAP3K7O43318 606 aa29.21■■■□□ 2.27
SSBP3-204ENST00000371320 ITGAXP20702 1163 aa29.21■■■□□ 2.27
SSBP3-204ENST00000371320 KPNA2P52292 529 aaKnown RBP29.21■■■□□ 2.27
SSBP3-204ENST00000371320 EPHB1P54762 984 aa29.21■■■□□ 2.27
SSBP3-204ENST00000371320 PEX6Q13608 980 aa29.21■■■□□ 2.27
SSBP3-204ENST00000371320 TRIP4Q15650 581 aaPredicted RBP29.21■■■□□ 2.27
SSBP3-204ENST00000371320 GABPB2Q8TAK5 448 aaPredicted RBP29.21■■■□□ 2.27
SSBP3-204ENST00000371320 HEXDCQ8WVB3 486 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms