RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 MCOLN3Q8TDD5 553 aa17.29■□□□□ 0.36
PTP4A1-201ENST00000370651 BTBD9Q96Q07 612 aa17.29■□□□□ 0.36
PTP4A1-201ENST00000370651 CIB1Q99828 191 aa17.29■□□□□ 0.36
PTP4A1-201ENST00000370651 CHID1Q9BWS9 393 aa17.29■□□□□ 0.36
PTP4A1-201ENST00000370651 KLHL28Q9NXS3 571 aa17.29■□□□□ 0.36
PTP4A1-201ENST00000370651 CST1P01037 141 aa17.29■□□□□ 0.36
PTP4A1-201ENST00000370651 ACSM2AQ08AH3 577 aa17.29■□□□□ 0.36
PTP4A1-201ENST00000370651 STARD3Q14849 445 aa17.29■□□□□ 0.36
PTP4A1-201ENST00000370651 ACSM2BQ68CK6 577 aa17.29■□□□□ 0.36
PTP4A1-201ENST00000370651 PIGZQ86VD9 579 aa17.29■□□□□ 0.36
PTP4A1-201ENST00000370651 HERC6Q8IVU3 1022 aa17.29■□□□□ 0.36
PTP4A1-201ENST00000370651 HELQQ8TDG4 1101 aa17.29■□□□□ 0.36
PTP4A1-201ENST00000370651 FAM198AQ9UFP1 575 aa17.29■□□□□ 0.36
PTP4A1-201ENST00000370651 AZIN1O14977 448 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 ERCC2P18074 760 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 UBA1P22314 1058 aaKnown RBP17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 GPR15P49685 360 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 PTPN20Q4JDL3 420 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 RETSATQ6NUM9 610 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 STARD8Q92502 1023 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 ACO2Q99798 780 aaKnown RBP17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 CDT1Q9H211 546 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 LNPEPQ9UIQ6 1025 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 RECQL4O94761 1208 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 CKMP06732 381 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 NPR3P17342 541 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 PTPN1P18031 435 aaKnown RBP17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 CENPAP49450 140 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 GCNT7Q6ZNI0 430 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 CCDC80Q76M96 950 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 STK40Q8N2I9 435 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 IL31RAQ8NI17 732 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 MED8Q96G25 268 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 FAM126AQ9BYI3 521 aaPredicted RBP17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 DNAJC28Q9NX36 388 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 TMA7Q9Y2S6 64 aaKnown RBP17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 H3BNX3 289 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 PAPSS1O43252 624 aaPredicted RBP17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 LGR5O75473 907 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 CDKN2BP42772 138 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 ALDH7A1P49419 539 aaKnown RBP17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 HADHBP55084 474 aaKnown RBP17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 NAA20P61599 178 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 BOP1Q14137 746 aaKnown RBP17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 CDH24Q86UP0 819 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 ANKRD52Q8NB46 1076 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 DNAJB3Q8WWF6 145 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.28■□□□□ 0.364e-8■■■■□ 22.7
PTP4A1-201ENST00000370651 UBA2Q9UBT2 640 aaPredicted RBP17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 SQORQ9Y6N5 450 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 AXLP30530 894 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 ALDH9A1P49189 494 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 C6orf52Q5T4I8 152 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 MON1BQ7L1V2 547 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 P2RY11Q96G91 374 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 RHOJQ9H4E5 214 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 AHSPQ9NZD4 102 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 ARHGAP28Q9P2N2 729 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 SH3GLB1Q9Y371 365 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 WASF2Q9Y6W5 498 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 TCHHQ07283 1943 aa17.28■□□□□ 0.36
PTP4A1-201ENST00000370651 ZNF37AP17032 561 aaPredicted RBP17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 PEX2P28328 305 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 FEN1P39748 380 aaKnown RBP17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 CD86P42081 329 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 RFX3P48380 749 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 ZNF549Q6P9A3 640 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 GK5Q6ZS86 529 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 C15orf52Q6ZUT6 534 aaKnown RBP17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 YAF2Q8IY57 180 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 FLCNQ8NFG4 579 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 OSBPL10Q9BXB5 764 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 WDR12Q9GZL7 423 aaKnown RBP17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 SENP6Q9GZR1 1112 aaPredicted RBP17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 RPS6KA6Q9UK32 745 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 KCNH4Q9UQ05 1017 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 NFASCO94856 1347 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 IDH3BO43837 385 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 LYPLA2O95372 231 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 POMCP01189 267 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 IDO1P14902 403 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 ASTE1Q2TB18 679 aaPredicted RBP17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 USP39Q53GS9 565 aaKnown RBP17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 ZDHHC24Q6UX98 284 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 TBC1D21Q8IYX1 336 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 SELENOMQ8WWX9 145 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 EPB41L4BQ9H329 900 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 CAPN10Q9HC96 672 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 EURLQ9NYK6 297 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 TAS2R1Q9NYW7 299 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 TBC1D30Q9Y2I9 924 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 PCDHB5Q9Y5E4 795 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 BUD23O43709 281 aaKnown RBP17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 NADKO95544 446 aaPredicted RBP17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 ALOX5P09917 674 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 COX7A2P14406 83 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 TPSB2P20231 275 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 BDNFP23560 247 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 CXCL9Q07325 125 aa17.27■□□□□ 0.36
PTP4A1-201ENST00000370651 MTA1Q13330 715 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms