RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 AGO1Q9UL18 857 aaKnown RBP7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 MTMR11A4FU01 709 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 PRPF4O43172 522 aaKnown RBP eCLIP7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 ACSL4O60488 711 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 ADAMTS4O75173 837 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 KATNA1O75449 491 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 PDE5AO76074 875 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 HIST1H2AGP0C0S8 130 aaPredicted RBP7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 HIST1H2ADP20671 130 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 SCNN1AP37088 669 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 GRIA4P48058 902 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 BCL2L1Q07817 233 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 PPIDQ08752 370 aaKnown RBP7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 UBAP2LQ14157 1087 aaKnown RBP7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 RCN1Q15293 331 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 GALNTL6Q49A17 601 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 BANPQ8N9N5 519 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 OR4K2Q8NGD2 314 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 PIP4K2CQ8TBX8 421 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 HIST1H2AHQ96KK5 128 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 ZNF778Q96MU6 729 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 HIST1H2AJQ99878 128 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 H2AFJQ9BTM1 129 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 NMUR2Q9GZQ4 415 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 WDR55Q9H6Y2 383 aaPredicted RBP7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 PRDM16Q9HAZ2 1276 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 V9GYQ6 96 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 DOCK3Q8IZD9 2030 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 F8W8V4 182 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 BTN3A1O00481 513 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 CCL16O15467 120 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 TLL1O43897 1013 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 BPGMP07738 259 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 RBP1P09455 135 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 TSHRP16473 764 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 NFKBIAP25963 317 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 PTPN4P29074 926 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 TM4SF4P48230 202 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 RGS4P49798 205 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 APLP1P51693 650 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 USP46P62068 366 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 CYP4F8P98187 520 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 GNA12Q03113 381 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 CLLU1OSQ5K130 101 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 ARMC12Q5T9G4 340 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 SCIMPQ6UWF3 145 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 TTC7BQ86TV6 843 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 TDRPQ86YL5 185 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 PDZD8Q8NEN9 1154 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 USP13Q92995 863 aaPredicted RBP7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 NXNL1Q96CM4 212 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 ZNF317Q96PQ6 595 aaPredicted RBP7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 C2orf49Q9BVC5 232 aaPredicted RBP7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 TBC1D10AQ9BXI6 508 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 TRIM54Q9BYV2 358 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 NDE1Q9NXR1 346 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 TAS2R13Q9NYV9 303 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 CCDC167Q9P0B6 97 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 CFAP97Q9P2B7 532 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 SLC2A6Q9UGQ3 507 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 ANGPTL2Q9UKU9 493 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 CPQQ9Y646 472 aa7.2□□□□□ -1.26
TGFBR3-202ENST00000370399 GABRDO14764 452 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 TPST1O60507 370 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 PROCP04070 461 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 CALB2P22676 271 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 PAX3P23760 479 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 PEX19P40855 299 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 ABCE1P61221 599 aaKnown RBP7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 WASHC5Q12768 1159 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 PTPRCAPQ14761 206 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 SKIV2LQ15477 1246 aaKnown RBP7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 DNAL1Q4LDG9 190 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 DNAJB7Q7Z6W7 309 aaPredicted RBP7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 YAF2Q8IY57 180 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 DEFB107AQ8IZN7 70 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 DCBLD1Q8N8Z6 715 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 CXorf38Q8TB03 319 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 MLPHQ9BV36 600 aaPredicted RBP7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 MRPL1Q9BYD6 325 aaKnown RBP7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 ASAH2Q9NR71 780 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 CATSPERZQ9NTU4 200 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 IGSF9Q9P2J2 1179 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 AURKCQ9UQB9 309 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 DLEC1Q9Y238 1755 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 KPNA3O00505 521 aaPredicted RBP7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 ANGPT2O15123 496 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 UNC5CO95185 931 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 KRT16P08779 473 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 SYN1P17600 705 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 ITGALP20701 1170 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 PBLDP30039 288 aaPredicted RBP7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 RAB10P61026 200 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 AP2B1P63010 937 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 SLC25A3Q00325 362 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 HNRNPDQ14103 355 aaKnown RBP7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 TRIP4Q15650 581 aaPredicted RBP7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.19□□□□□ -1.265e-11■■■■■ 42.7
TGFBR3-202ENST00000370399 KIRREL3Q8IZU9 778 aa7.19□□□□□ -1.26
TGFBR3-202ENST00000370399 OLIG1Q8TAK6 271 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms