RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 NXPH1P58417 271 aa20.83■□□□□ 0.93
SMNDC1-201ENST00000369592 SHC2P98077 582 aa20.83■□□□□ 0.93
SMNDC1-201ENST00000369592 HNRNPDQ14103 355 aaKnown RBP20.83■□□□□ 0.93
SMNDC1-201ENST00000369592 FGL2Q14314 439 aa20.83■□□□□ 0.93
SMNDC1-201ENST00000369592 SETMARQ53H47 684 aaPredicted RBP20.83■□□□□ 0.93
SMNDC1-201ENST00000369592 ARHGAP36Q6ZRI8 547 aa20.83■□□□□ 0.93
SMNDC1-201ENST00000369592 H2AFVQ71UI9 128 aa20.83■□□□□ 0.93
SMNDC1-201ENST00000369592 RAB7BQ96AH8 199 aa20.83■□□□□ 0.93
SMNDC1-201ENST00000369592 CAMK1GQ96NX5 476 aa20.83■□□□□ 0.93
SMNDC1-201ENST00000369592 SLC32A1Q9H598 525 aa20.83■□□□□ 0.93
SMNDC1-201ENST00000369592 ZWILCHQ9H900 591 aa20.83■□□□□ 0.93
SMNDC1-201ENST00000369592 NHEJ1Q9H9Q4 299 aaPredicted RBP20.83■□□□□ 0.93
SMNDC1-201ENST00000369592 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.83■□□□□ 0.93
SMNDC1-201ENST00000369592 DKK3Q9UBP4 350 aa20.83■□□□□ 0.93
SMNDC1-201ENST00000369592 UBA2Q9UBT2 640 aaPredicted RBP20.83■□□□□ 0.93
SMNDC1-201ENST00000369592 LRRK1Q38SD2 2015 aa20.82■□□□□ 0.92
SMNDC1-201ENST00000369592 A0A1B0GTQ1 180 aa20.82■□□□□ 0.92
SMNDC1-201ENST00000369592 PRAMEF26H0Y7S4 382 aa20.82■□□□□ 0.92
SMNDC1-201ENST00000369592 H3BRJ5 948 aa20.82■□□□□ 0.92
SMNDC1-201ENST00000369592 TLR4O00206 839 aa20.82■□□□□ 0.92
SMNDC1-201ENST00000369592 KRIT1O00522 736 aa20.82■□□□□ 0.92
SMNDC1-201ENST00000369592 KCNK3O14649 394 aa20.82■□□□□ 0.92
SMNDC1-201ENST00000369592 INSIG1O15503 277 aa20.82■□□□□ 0.92
SMNDC1-201ENST00000369592 DFNA5O60443 496 aa20.82■□□□□ 0.92
SMNDC1-201ENST00000369592 PEX11BO96011 259 aa20.82■□□□□ 0.92
SMNDC1-201ENST00000369592 AMPD1P23109 780 aa20.82■□□□□ 0.92
SMNDC1-201ENST00000369592 CSNK1DP48730 415 aa20.82■□□□□ 0.92
SMNDC1-201ENST00000369592 RHOAP61586 193 aa20.82■□□□□ 0.92
SMNDC1-201ENST00000369592 OVGP1Q12889 678 aa20.82■□□□□ 0.92
SMNDC1-201ENST00000369592 SEL1L3Q68CR1 1132 aa20.82■□□□□ 0.92
SMNDC1-201ENST00000369592 GLRX5Q86SX6 157 aa20.82■□□□□ 0.92
SMNDC1-201ENST00000369592 SPATS2Q86XZ4 545 aaKnown RBP20.82■□□□□ 0.92
SMNDC1-201ENST00000369592 NAXDQ8IW45 347 aa20.82■□□□□ 0.92
SMNDC1-201ENST00000369592 TC2NQ8N9U0 490 aa20.82■□□□□ 0.92
SMNDC1-201ENST00000369592 ERVMER34-1Q9H9K5 563 aa20.82■□□□□ 0.92
SMNDC1-201ENST00000369592 AASDHPPTQ9NRN7 309 aa20.82■□□□□ 0.92
SMNDC1-201ENST00000369592 ZNHIT6Q9NWK9 470 aaKnown RBP20.82■□□□□ 0.92
SMNDC1-201ENST00000369592 RCOR3Q9P2K3 495 aaPredicted RBP20.82■□□□□ 0.92
SMNDC1-201ENST00000369592 PCOLCE2Q9UKZ9 415 aa20.82■□□□□ 0.92
SMNDC1-201ENST00000369592 TSPAN11A1L157 253 aa20.81■□□□□ 0.92
SMNDC1-201ENST00000369592 DAPK3O43293 454 aa20.81■□□□□ 0.92
SMNDC1-201ENST00000369592 MTA2O94776 668 aa20.81■□□□□ 0.92
SMNDC1-201ENST00000369592 IGSF6O95976 241 aa20.81■□□□□ 0.92
SMNDC1-201ENST00000369592 UGT2B4P06133 528 aa20.81■□□□□ 0.92
SMNDC1-201ENST00000369592 RGRP47804 291 aa20.81■□□□□ 0.92
SMNDC1-201ENST00000369592 IL10RBQ08334 325 aa20.81■□□□□ 0.92
SMNDC1-201ENST00000369592 TCEAL1Q15170 157 aa20.81■□□□□ 0.92
SMNDC1-201ENST00000369592 FBXL19Q6PCT2 694 aa20.81■□□□□ 0.92
SMNDC1-201ENST00000369592 GDPD4Q6W3E5 623 aa20.81■□□□□ 0.92
SMNDC1-201ENST00000369592 ZNF354CQ86Y25 554 aa20.81■□□□□ 0.92
SMNDC1-201ENST00000369592 CNGA4Q8IV77 575 aa20.81■□□□□ 0.92
SMNDC1-201ENST00000369592 HCAR2Q8TDS4 363 aa20.81■□□□□ 0.92
SMNDC1-201ENST00000369592 CTNNBL1Q8WYA6 563 aaPredicted RBP20.81■□□□□ 0.92
SMNDC1-201ENST00000369592 HSPH1Q92598 858 aa20.81■□□□□ 0.92
SMNDC1-201ENST00000369592 KLHL32Q96NJ5 620 aa20.81■□□□□ 0.92
SMNDC1-201ENST00000369592 C1QTNF2Q9BXJ5 285 aa20.81■□□□□ 0.92
SMNDC1-201ENST00000369592 RBSNQ9H1K0 784 aa20.81■□□□□ 0.92
SMNDC1-201ENST00000369592 CTTNBP2NLQ9P2B4 639 aa20.81■□□□□ 0.92
SMNDC1-201ENST00000369592 SHROOM3Q8TF72 1996 aa20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 AKR1B15C9JRZ8 316 aaPredicted RBP20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 AKR1B10O60218 316 aa20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 BUB1BO60566 1050 aaPredicted RBP20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 CD48P09326 243 aa20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 TPM1P09493 284 aa20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 MAN1A1P33908 653 aa20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 ARL4AP40617 200 aa20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 RXRGP48443 463 aa20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 C21orf59P57076 290 aa20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 TAS2R40P59535 323 aa20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 ATP13A4Q4VNC1 1196 aa20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 KIAA1161Q6NSJ0 714 aa20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 ADAT2Q7Z6V5 191 aaKnown RBP20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 ZSCAN30Q86W11 494 aa20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 RYBPQ8N488 228 aaPredicted RBP20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 ASB12Q8WXK4 309 aa20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 SKA1Q96BD8 255 aa20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 NSMCE3Q96MG7 304 aa20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 ELF4Q99607 663 aaPredicted RBP20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 GPR27Q9NS67 375 aa20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 SPTLC3Q9NUV7 552 aa20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 IPO11Q9UI26 975 aaKnown RBP20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 LCMT1Q9UIC8 334 aa20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 CA5BQ9Y2D0 317 aa20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 COL5A1P20908 1838 aaPredicted RBP20.8■□□□□ 0.92
SMNDC1-201ENST00000369592 FRYQ5TBA9 3013 aa20.79■□□□□ 0.92
SMNDC1-201ENST00000369592 SPAARA0A1B0GVQ0 90 aa20.79■□□□□ 0.92
SMNDC1-201ENST00000369592 SLC31A1O15431 190 aa20.79■□□□□ 0.92
SMNDC1-201ENST00000369592 FLRT2O43155 660 aa20.79■□□□□ 0.92
SMNDC1-201ENST00000369592 TSPAN6O43657 245 aa20.79■□□□□ 0.92
SMNDC1-201ENST00000369592 TIMP2P16035 220 aa20.79■□□□□ 0.92
SMNDC1-201ENST00000369592 PRLRP16471 622 aa20.79■□□□□ 0.92
SMNDC1-201ENST00000369592 CCT8P50990 548 aa20.79■□□□□ 0.92
SMNDC1-201ENST00000369592 RPS21P63220 83 aaKnown RBP20.79■□□□□ 0.92
SMNDC1-201ENST00000369592 NSUN2Q08J23 767 aaKnown RBP eCLIP20.79■□□□□ 0.92
SMNDC1-201ENST00000369592 RFTN1Q14699 578 aaPredicted RBP20.79■□□□□ 0.92
SMNDC1-201ENST00000369592 TSR1Q2NL82 804 aaKnown RBP20.79■□□□□ 0.92
SMNDC1-201ENST00000369592 KANSL1Q7Z3B3 1105 aa20.79■□□□□ 0.92
SMNDC1-201ENST00000369592 ABI3BPQ7Z7G0 1075 aa20.79■□□□□ 0.92
SMNDC1-201ENST00000369592 GAS2L3Q86XJ1 694 aa20.79■□□□□ 0.92
SMNDC1-201ENST00000369592 TSEN2Q8NCE0 465 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms