RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 TFP02787 698 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 UNGP13051 313 aaPredicted RBP3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 CDAP32320 146 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 CIITAP33076 1130 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 UBA7P41226 1012 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 GARSP41250 739 aaKnown RBP3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 GNAQP50148 359 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 HDAC4P56524 1084 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 CLDN2P57739 230 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 PROK1P58294 105 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 NHLH1Q02575 133 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 GOLGA8DPQ0D2H9 430 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 NIPAL4Q0D2K0 466 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 EPS8Q12929 822 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 CSTF3Q12996 717 aaKnown RBP3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 CHAF1BQ13112 559 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 KLF10Q13118 480 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 FHL2Q14192 279 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 SLC9C1Q4G0N8 1177 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 TMEM119Q4V9L6 283 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 MIDNQ504T8 468 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 ALG10Q5BKT4 473 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 ALG10BQ5I7T1 473 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 PLEKHS1Q5SXH7 462 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 FBXO42Q6P3S6 717 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 CPLX2Q6PUV4 134 aaKnown RBP3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 FAM83HQ6ZRV2 1179 aaPredicted RBP3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 KDELC2Q7Z4H8 507 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 DDIASQ8IXT1 998 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 ADGRF2Q8IZF7 708 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 FAM185AQ8N0U4 392 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 CADM3Q8N126 398 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 GALNT16Q8N428 558 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 GTF3C6Q969F1 213 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 CENPOQ9BU64 300 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 POLR1BQ9H9Y6 1135 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 ASAH2Q9NR71 780 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 SPATS2LQ9NUQ6 558 aaKnown RBP3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 ABI3Q9P2A4 366 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 AGO2Q9UKV8 859 aaKnown RBP3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 SNX8Q9Y5X2 465 aa3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 COL11A2P13942 1736 aaPredicted RBP3.94□□□□□ -1.78
RNU6-28P-201ENST00000362378 TRBV5-3A0A0A0MS03 114 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 DDTLA6NHG4 134 aaPredicted RBP3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 B4DLN1 442 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 EIF3CLB5ME19 914 aaKnown RBP3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 NPIPB11E5RHQ5 1161 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 F8W810 466 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 IFNL4K9M1U5 179 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 UGDHO60701 494 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 GJB3O75712 270 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 PGM3O95394 542 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 TOP3BO95985 862 aaKnown RBP3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 MT-CYBP00156 380 aaPredicted RBP3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 PRKCGP05129 697 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 AKR1B1P15121 316 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 CTPS1P17812 591 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 EDN2P20800 178 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 BMP5P22003 454 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 ACSL1P33121 698 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 PPARGP37231 505 aaPredicted RBP3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 GPR12P47775 334 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 PIP4K2AP48426 406 aaPredicted RBP3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 RPS13P62277 151 aaKnown RBP3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 ZXDAP98168 799 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 CEBPZQ03701 1054 aaKnown RBP3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 SLC10A2Q12908 348 aaPredicted RBP3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 FOXF2Q12947 444 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 OLIG2Q13516 323 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 VEPH1Q14D04 833 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 SHBQ15464 509 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 ALG11Q2TAA5 492 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 CFAP58Q5T655 872 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 PAPD7Q5XG87 772 aaKnown RBP3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 TMEM154Q6P9G4 183 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 ZNF782Q6ZMW2 699 aaPredicted RBP3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 ZNF66Q6ZN08 573 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 DEF8Q6ZN54 512 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 ZNF788Q6ZQV5 615 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 PTF1AQ7RTS3 328 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 SERPINA11Q86U17 422 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 TBC1D26Q86UD7 250 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 DHX40Q8IX18 779 aaKnown RBP3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 SRBD1Q8N5C6 995 aaKnown RBP3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 SLC25A41Q8N5S1 370 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 BOLLQ8N9W6 283 aaKnown RBP3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 MCPH1Q8NEM0 835 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 MMABQ96EY8 250 aaPredicted RBP3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 FEM1CQ96JP0 617 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 CMTM3Q96MX0 182 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 WDFY2Q96P53 400 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 AGAP2Q99490 1192 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 FAM118BQ9BPY3 351 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 SH2D3AQ9BRG2 576 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 TUBB6Q9BUF5 446 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 PCED1AQ9H1Q7 454 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 IKZF4Q9H2S9 585 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 KAT14Q9H8E8 782 aa3.93□□□□□ -1.78
RNU6-28P-201ENST00000362378 WDR6Q9NNW5 1121 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms