RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 FAM98BQ52LJ0 330 aaKnown RBP20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 C2orf27AQ580R0 203 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 ANKRD23Q86SG2 305 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 ARL14EPQ8N8R7 260 aaPredicted RBP20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 RAD51AP1Q96B01 352 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 TMEM79Q9BSE2 394 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 OXCT2Q9BYC2 517 aaPredicted RBP20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 DEC1Q9P2X7 70 aa20.46■□□□□ 0.87
CDC42BPB-201ENST00000361246 LINC00032P0C843 101 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 PTSQ03393 145 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 HYIQ5T013 277 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 UNC5AQ6ZN44 842 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 FAM35AQ86V20 835 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 CLUP10909 449 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 ZNF24P17028 368 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 ECM1Q16610 540 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 EID3Q8N140 333 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 ACTRT1Q8TDG2 376 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 PACSIN3Q9UKS6 424 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 KANSL1LA0AUZ9 987 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 AVILO75366 819 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 TM4SF1P30408 202 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 PIK3CGP48736 1102 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 ADPRHL2Q9NX46 363 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 ZFP37Q9Y6Q3 630 aaPredicted RBP20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 HACD1B0YJ81 288 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 RPL9P32969 192 aaKnown RBP20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 SPRYD7Q5W111 196 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 SLC9A9Q8IVB4 645 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 CACTIN-AS1Q8N1I8 211 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 TMEM161BQ8NDZ6 487 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 FTH1P02794 183 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 MTA1Q13330 715 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 PARP6Q2NL67 630 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 NEPROQ6NW34 567 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 ZNF544Q6NX49 715 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 ZNF563Q8TA94 476 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 HAS1Q92839 578 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 VPS33AQ96AX1 596 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 DUSP9Q99956 384 aaKnown RBP20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 PRKD2Q9BZL6 878 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 TMBIM4Q9HC24 238 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 UBIAD1Q9Y5Z9 338 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 ZNF780BQ9Y6R6 833 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 USP32Q8NFA0 1604 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 C1RP00736 705 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 ERBB2P04626 1255 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 FNBP1LQ5T0N5 605 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 APTXQ7Z2E3 356 aaKnown RBP20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 FCRL2Q96LA5 508 aaPredicted RBP20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 BRINP2Q9C0B6 783 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 DLGAP2Q9P1A6 1054 aa20.45■□□□□ 0.86
CDC42BPB-201ENST00000361246 GRM6O15303 877 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 CNOT3O75175 753 aaKnown RBP20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 SMPD1P17405 629 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 PARP8Q8N3A8 854 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 C1orf50Q9BV19 199 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 TAGLN3Q9UI15 199 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 TKTP29401 623 aaKnown RBP20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 CTSOP43234 321 aaPredicted RBP20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 FBXO48Q5FWF7 155 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 PCDH20Q8N6Y1 951 aaKnown RBP20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 LINGO1Q96FE5 620 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 PWWP2AQ96N64 755 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 DNAJC18Q9H819 358 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 NR2F1P10589 423 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 CPSF6Q16630 551 aaKnown RBP eCLIP20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 HDAC7Q8WUI4 952 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 DCXO43602 365 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 KCNH1O95259 989 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 NUP107P57740 925 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 MYBPC1Q00872 1141 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 FKBP1CQ5VVH2 108 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 IRGCQ6NXR0 463 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 FAM9CQ8IZT9 166 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 HPSEQ9Y251 543 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 NPEPPSL1A6NEC2 478 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 C9IYK1 514 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 GJA9P57773 515 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 RBM43Q6ZSC3 357 aaKnown RBP20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 ANKRD52Q8NB46 1076 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 NSMCE2Q96MF7 247 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 TTLL2Q9BWV7 592 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 NRDE2Q9H7Z3 1164 aa20.44■□□□□ 0.86
CDC42BPB-201ENST00000361246 ARL5CA6NH57 179 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 GPR20Q99678 358 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 SERHL2Q9H4I8 314 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 SERHLQ9NQF3 203 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 NINJ2Q9NZG7 142 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 COPG1Q9Y678 874 aaKnown RBP20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 SIGLEC16A6NMB1 481 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 KLHL18O94889 574 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 BUD31P41223 144 aaPredicted RBP20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 DHPSP49366 369 aaPredicted RBP20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 RPL38P63173 70 aaKnown RBP20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 GCNT1Q02742 428 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 ZSWIM7Q19AV6 140 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 MPPE1Q53F39 396 aa20.43■□□□□ 0.86
CDC42BPB-201ENST00000361246 RHBDF2Q6PJF5 856 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms