RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 USP9XQ93008 2570 aaPredicted RBP6.07□□□□□ -1.44
CDC42SE2-201ENST00000360515 GOLGA6L7A0A1B0GV03 622 aa6.07□□□□□ -1.44
CDC42SE2-201ENST00000360515 SLC16A3O15427 465 aaKnown RBP6.07□□□□□ -1.44
CDC42SE2-201ENST00000360515 RAB40ALP0C0E4 278 aa6.07□□□□□ -1.44
CDC42SE2-201ENST00000360515 FGF5P12034 268 aa6.07□□□□□ -1.44
CDC42SE2-201ENST00000360515 TBXAS1P24557 533 aaPredicted RBP6.07□□□□□ -1.44
CDC42SE2-201ENST00000360515 NOS2P35228 1153 aa6.07□□□□□ -1.44
CDC42SE2-201ENST00000360515 ADKP55263 362 aaKnown RBP6.07□□□□□ -1.44
CDC42SE2-201ENST00000360515 RAPGEF1Q13905 1077 aa6.07□□□□□ -1.44
CDC42SE2-201ENST00000360515 SEPT6Q14141 434 aa6.07□□□□□ -1.44
CDC42SE2-201ENST00000360515 GRM3Q14832 879 aa6.07□□□□□ -1.44
CDC42SE2-201ENST00000360515 ZRSR2Q15696 482 aaKnown RBP6.07□□□□□ -1.44
CDC42SE2-201ENST00000360515 ZNF805Q5CZA5 627 aa6.07□□□□□ -1.44
CDC42SE2-201ENST00000360515 PRAMEF14Q5SWL7 426 aa6.07□□□□□ -1.44
CDC42SE2-201ENST00000360515 NRROSQ86YC3 692 aa6.07□□□□□ -1.44
CDC42SE2-201ENST00000360515 ST6GALNAC3Q8NDV1 305 aa6.07□□□□□ -1.44
CDC42SE2-201ENST00000360515 ARHGEF26Q96DR7 871 aa6.07□□□□□ -1.44
CDC42SE2-201ENST00000360515 NUCKS1Q9H1E3 243 aaKnown RBP6.07□□□□□ -1.44
CDC42SE2-201ENST00000360515 TP53TG5Q9Y2B4 290 aa6.07□□□□□ -1.44
CDC42SE2-201ENST00000360515 RNF215Q9Y6U7 377 aa6.07□□□□□ -1.44
CDC42SE2-201ENST00000360515 FFAR2O15552 330 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 IL1BP01584 269 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 IVLP07476 585 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 PDIA4P13667 645 aaKnown RBP6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 TSHRP16473 764 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 ADORA2BP29275 332 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 TXLNAP40222 546 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 GEMIN4P57678 1058 aaKnown RBP6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 DLG4P78352 724 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 CDH18Q13634 790 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 SEL1L3Q68CR1 1132 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 IGFL2Q6UWQ7 119 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 CEACAM20Q6UY09 585 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 CACNA2D3Q8IZS8 1091 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 ZNF366Q8N895 744 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 GPR87Q9BY21 358 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 SLC29A3Q9BZD2 475 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 TRNAU1APQ9NX07 287 aaKnown RBP6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 DNAJC28Q9NX36 388 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 LOC101059948A0A1B0GTJ6 334 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 WASH4PA8MWX3 477 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 MKRN2OSH3BPM6 223 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 RNF103O00237 685 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 JMJD7P0C870 316 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 GNLYP22749 145 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 VAMP7P51809 220 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 FOSBP53539 338 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 RPS24P62847 133 aaKnown RBP6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 GUCY1B3Q02153 619 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 DPYDQ12882 1025 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 CARD16Q5EG05 197 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 ZFYVE27Q5T4F4 411 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 OTUD1Q5VV17 481 aaPredicted RBP6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 AFMIDQ63HM1 303 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 ZNF787Q6DD87 383 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 RPUSD3Q6P087 351 aaKnown RBP6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 PARS2Q7L3T8 475 aaKnown RBP6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 PRSS42Q7Z5A4 293 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 AGBL5Q8NDL9 886 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 OR52K2Q8NGK3 314 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 LMX1AQ8TE12 382 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 ECHDC3Q96DC8 303 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 PHF12Q96QT6 1004 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 HEPHQ9BQS7 1158 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 C2orf49Q9BVC5 232 aaPredicted RBP6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 FRMD8Q9BZ67 464 aaPredicted RBP6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 SLC13A1Q9BZW2 595 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 SEMA6CQ9H3T2 930 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 EPB41L5Q9HCM4 733 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 FAM49BQ9NUQ9 324 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 AKAP7Q9P0M2 348 aaPredicted RBP6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 TSPAN16Q9UKR8 245 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 PAXBP1Q9Y5B6 917 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 RELNP78509 3460 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 PIEZO2Q9H5I5 2752 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 VPS4BO75351 444 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 RHOBTB3O94955 611 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 MT-ND3P03897 115 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 ABL2P42684 1182 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 GPD2P43304 727 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 CXCR3P49682 368 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 ZNF235Q14590 738 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 RNF219Q5W0B1 726 aaPredicted RBP6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 SPECC1LQ69YQ0 1117 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 KRT39Q6A163 491 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 FAM184AQ8NB25 1140 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 AVL9Q8NBF6 648 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 ARHGEF2Q92974 986 aaKnown RBP6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 TATDN2Q93075 761 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 TUBGCP5Q96RT8 1024 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 TEX101Q9BY14 249 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 RUBCNLQ9H714 662 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 SFMBT1Q9UHJ3 866 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 VPS4AQ9UN37 437 aa6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 FARP1Q9Y4F1 1045 aaPredicted RBP6.06□□□□□ -1.44
CDC42SE2-201ENST00000360515 SDK1Q7Z5N4 2213 aa6.05□□□□□ -1.44
CDC42SE2-201ENST00000360515 TDRD6O60522 2096 aaKnown RBP6.05□□□□□ -1.44
CDC42SE2-201ENST00000360515 RP1P56715 2156 aa6.05□□□□□ -1.44
CDC42SE2-201ENST00000360515 E2F3O00716 465 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms