RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 FBXO39Q8N4B4 442 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 CARNMT1Q8N4J0 409 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 APOL2Q9BQE5 337 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 MAGI2Q86UL8 1455 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 FAM237BA0A1B0GVD1 139 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 C9P02748 559 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 KBTBD7Q8WVZ9 684 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 SPATA9Q9BWV2 254 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 FBXO9Q9UK97 447 aaPredicted RBP13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 AP4E1Q9UPM8 1137 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 MRPS33Q9Y291 106 aaKnown RBP13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 NDUFS2O75306 463 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 NELFEP18615 380 aaKnown RBP13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 ADRA1DP25100 572 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 IGFALSP35858 605 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 SCNN1BP51168 640 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 HMGCS2P54868 508 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 LENG9Q96B70 501 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 ERMAPQ96PL5 475 aaPredicted RBP13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 ARL15Q9NXU5 204 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 GPN3Q9UHW5 284 aaPredicted RBP13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 ARID1BQ8NFD5 2236 aaPredicted RBP13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 KDM4BO94953 1096 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 CCNDBP1O95273 360 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 RPA1P27694 616 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 C15orf59Q2T9L4 293 aaPredicted RBP13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 STOX2Q9P2F5 926 aaPredicted RBP13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 ITGA11Q9UKX5 1188 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 MAGEC1O60732 1142 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 METTL18O95568 372 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 CYB5AP00167 134 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 COX4I1P13073 169 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 NPTX2P47972 431 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 SMU1Q2TAY7 513 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 SPANXN3Q5MJ09 141 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 MSANTD1Q6ZTZ1 278 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 USP49Q70CQ1 688 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 KCNMB4Q86W47 210 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 ITFG2Q969R8 447 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 USP6P35125 1406 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 WDR27A2RRH5 827 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 MCIDASD6RGH6 385 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 MAP2K7O14733 419 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 RAP1GAPP47736 663 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 GMCL1Q96IK5 515 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 DHRS7Q9Y394 339 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 G3V2T6 193 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 CCRL2O00421 344 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 ARFIP1P53367 373 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 CBWD3Q5JTY5 395 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 CBWD5Q5RIA9 395 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 IQSEC1Q6DN90 963 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 PTAR1Q7Z6K3 402 aaPredicted RBP13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 OAFQ86UD1 273 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 DMRTB1Q96MA1 342 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 TDRD3Q9H7E2 651 aaKnown RBP13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 FANCFQ9NPI8 374 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 DNAJC11Q9NVH1 559 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 TDRKHQ9Y2W6 561 aaKnown RBP13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 GIT1Q9Y2X7 761 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 TAF6LQ9Y6J9 622 aa13.32□□□□□ -0.28
SRGAP3-201ENST00000360413 SLC28A1O00337 649 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 CST1P01037 141 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 ITIH1P19827 911 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 PCBP1Q15365 356 aaKnown RBP eCLIP13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 ARMC8Q8IUR7 673 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 ADGRF2Q8IZF7 708 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 ZNF615Q8N8J6 731 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 ACAT2Q9BWD1 397 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 RGS17Q9UGC6 210 aaPredicted RBP13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 E7ENX8 843 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 GZMAP12544 262 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 ACAP2Q15057 778 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 MFSD7Q6UXD7 560 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 PRMT6Q96LA8 375 aaPredicted RBP13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 FICDQ9BVA6 458 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 NINJ2Q9NZG7 142 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 UMODL1Q5DID0 1318 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 FADS2O95864 444 aaKnown RBP13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 VDRP11473 427 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 CYP11B1P15538 503 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 HTR1BP28222 390 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 RPL14P50914 215 aaKnown RBP13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 PTPN5P54829 565 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 CDH17Q12864 832 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 SPESP1Q6UW49 350 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 GPALPP1Q8IXQ4 340 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 VAT1Q99536 393 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 ZMYM5Q9UJ78 669 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 TBX20Q9UMR3 447 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 THPOP40225 353 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 ITGA7Q13683 1181 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 DPYSQ14117 519 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 HKDC1Q2TB90 917 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 CES5AQ6NT32 575 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 SPOCD1Q6ZMY3 1216 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 SEPT12Q8IYM1 358 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 FAM47BQ8NA70 645 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 ZNF607Q96SK3 696 aa13.31□□□□□ -0.28
SRGAP3-201ENST00000360413 NDOR1Q9UHB4 597 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms