RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 ZCWPW2A0A1B0GU75 182 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 ACSL4O60488 711 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 MLNP12872 115 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 DNAJB1P25685 340 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 HARS2P49590 506 aaKnown RBP12.81□□□□□ -0.36
GGPS1-202ENST00000358966 RAB33AQ14088 237 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 PLPP4Q5VZY2 271 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 SLC15A3Q8IY34 581 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 C7orf61Q8IZ16 206 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 LZTR1Q8N653 840 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 BANPQ8N9N5 519 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 ANKLE1Q8NAG6 615 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 CKAP2Q8WWK9 683 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 PTPRN2Q92932 1015 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 MRGPRX2Q96LB1 330 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 SMIM14Q96QK8 99 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 FSD1LQ9BXM9 530 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 HCFC1R1Q9NWW0 138 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 PLK2Q9NYY3 685 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 BFARQ9NZS9 450 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 AGO1Q9UL18 857 aaKnown RBP12.81□□□□□ -0.36
GGPS1-202ENST00000358966 LRRC42Q9Y546 428 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 IQANK1A0A1B0GTG1 560 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 MTSS1O43312 755 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 HNRNPRO43390 633 aaKnown RBP12.8□□□□□ -0.36
GGPS1-202ENST00000358966 LPXNO60711 386 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 SPAG6O75602 509 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 RFPL1O75677 317 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 SUN1O94901 812 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 PIRTP0C851 137 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 MBL2P11226 248 aaPredicted RBP12.8□□□□□ -0.36
GGPS1-202ENST00000358966 NRG1Q02297 640 aaPredicted RBP12.8□□□□□ -0.36
GGPS1-202ENST00000358966 STEAP4Q687X5 459 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 DENND5AQ6IQ26 1287 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 CGB2Q6NT52 195 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 SH2D5Q6ZV89 423 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 GAREM2Q75VX8 874 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 CMC1Q7Z7K0 106 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 CERS2Q96G23 380 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 RMDN2Q96LZ7 410 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 ANKRD27Q96NW4 1050 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 TBL1YQ9BQ87 522 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 ACTL7BQ9Y614 415 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 TRIOO75962 3097 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 GRXCR1A8MXD5 290 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 BUD23O43709 281 aaKnown RBP12.8□□□□□ -0.36
GGPS1-202ENST00000358966 RFPL2O75678 378 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 OAS1P00973 400 aaKnown RBP12.8□□□□□ -0.36
GGPS1-202ENST00000358966 POLBP06746 335 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 TAC1P20366 129 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 GABRR2P28476 465 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 SMAD3P84022 425 aaKnown RBP12.8□□□□□ -0.36
GGPS1-202ENST00000358966 RING1Q06587 406 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 SEPT6Q14141 434 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 VEPH1Q14D04 833 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 PPM1JQ5JR12 505 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 TTC39BQ5VTQ0 682 aaPredicted RBP12.8□□□□□ -0.36
GGPS1-202ENST00000358966 LINGO4Q6UY18 593 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 FIBCD1Q8N539 461 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 TTC17Q96AE7 1141 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 ZFRQ96KR1 1074 aaKnown RBP12.8□□□□□ -0.36
GGPS1-202ENST00000358966 NSMCE3Q96MG7 304 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 VAT1Q99536 393 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 ZBP1Q9H171 429 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 VCXQ9H320 206 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 LRRC40Q9H9A6 602 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 CAB39LQ9H9S4 337 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 STK38LQ9Y2H1 464 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 PCDHB12Q9Y5F1 795 aa12.8□□□□□ -0.36
GGPS1-202ENST00000358966 A0A1W2PRU2 124 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 CCL16O15467 120 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 PRPF4O43172 522 aaKnown RBP eCLIP12.79□□□□□ -0.361e-6■■■□□ 16.7
GGPS1-202ENST00000358966 FGBP02675 491 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 ALDOAP04075 364 aaKnown RBP12.79□□□□□ -0.36
GGPS1-202ENST00000358966 ATP6V1C1P21283 382 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 WNT3AP56704 352 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 DLG2Q15700 870 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 ANKRD20A4Q4UJ75 823 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 FSCBQ5H9T9 825 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 MARC1Q5VT66 337 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 TPGS2Q68CL5 300 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 IL31Q6EBC2 164 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 FAM109BQ6ICB4 259 aaPredicted RBP12.79□□□□□ -0.36
GGPS1-202ENST00000358966 PACS1Q6VY07 963 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 IQCF2Q8IXL9 164 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 CCDC197Q8NCU1 140 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 WFDC5Q8TCV5 224 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 TCF25Q9BQ70 676 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 IL21Q9HBE4 155 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 PPARGC1AQ9UBK2 798 aaKnown RBP12.79□□□□□ -0.36
GGPS1-202ENST00000358966 FETUBQ9UGM5 382 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 DNAH14Q0VDD8 3507 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 A0A0U1RQS6 177 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 CCDC195A0A1B0GUA6 201 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 DRGXA6NNA5 263 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 WASH4PA8MWX3 477 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 LILRB3O75022 631 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 CXCL14O95715 111 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 MMP2P08253 660 aa12.79□□□□□ -0.36
GGPS1-202ENST00000358966 SNRPAP09012 282 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms