RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 SLC39A8Q9C0K1 460 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 TRPV6Q9H1D0 765 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 CATSPERBQ9H7T0 1116 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 NDFIP2Q9NV92 336 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 TMLHEQ9NVH6 421 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 ARHGEF38Q9NXL2 777 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 NCKIPSDQ9NZQ3 722 aa8.69□□□□□ -1.02
RFX3-202ENST00000358730 COPG1Q9Y678 874 aaKnown RBP8.69□□□□□ -1.02
RFX3-202ENST00000358730 NEMP2A6NFY4 417 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 MATN3O15232 486 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 FGF10O15520 208 aaPredicted RBP8.68□□□□□ -1.02
RFX3-202ENST00000358730 PEX1O43933 1283 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 MOCS2O96007 188 aaPredicted RBP8.68□□□□□ -1.02
RFX3-202ENST00000358730 IGLV3-25P01717 112 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 DNAJB1P25685 340 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 BRCC3P46736 316 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 KPNA2P52292 529 aaKnown RBP8.68□□□□□ -1.02
RFX3-202ENST00000358730 FOLH1Q04609 750 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 HERC3Q15034 1050 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 PCSK7Q16549 785 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 ZNF423Q2M1K9 1284 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 LIN52Q52LA3 116 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 MORN1Q5T089 497 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 CWF19L1Q69YN2 538 aaKnown RBP8.68□□□□□ -1.02
RFX3-202ENST00000358730 ZNF280DQ6N043 979 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 AGMOQ6ZNB7 445 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 PIWIL4Q7Z3Z4 852 aaKnown RBP8.68□□□□□ -1.02
RFX3-202ENST00000358730 METTL23Q86XA0 190 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 KDM1BQ8NB78 822 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 BHLHE22Q8NFJ8 381 aaPredicted RBP8.68□□□□□ -1.02
RFX3-202ENST00000358730 PTCD2Q8WV60 388 aaKnown RBP8.68□□□□□ -1.02
RFX3-202ENST00000358730 LRGUKQ96M69 825 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 BTBD9Q96Q07 612 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 NDNQ99608 321 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 SH3GL3Q99963 347 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 CYP4F12Q9HCS2 524 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 ENTPD7Q9NQZ7 604 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 CHST12Q9NRB3 414 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 RBM22Q9NW64 420 aaKnown RBP eCLIP8.68□□□□□ -1.02
RFX3-202ENST00000358730 SFMBT1Q9UHJ3 866 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 TRPV2Q9Y5S1 764 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 MYO16Q9Y6X6 1858 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 PTPRDP23468 1912 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 A0A087X1B8 175 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 C15orf38-AP3S2A0A0A6YYH1 394 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 STX16-NPEPL1H3BU86 382 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 KIF3CO14782 793 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 AURKAO14965 403 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 NPHS1O60500 1241 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 TADA2AO75478 443 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 POMCP01189 267 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 HNRNPLP14866 589 aaKnown RBP eCLIP8.68□□□□□ -1.02
RFX3-202ENST00000358730 CPB1P15086 417 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 CALRP27797 417 aaKnown RBP8.68□□□□□ -1.02
RFX3-202ENST00000358730 ADSLP30566 484 aaPredicted RBP8.68□□□□□ -1.02
RFX3-202ENST00000358730 HOXC8P31273 242 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 CCR1P32246 355 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 RPL9P32969 192 aaKnown RBP8.68□□□□□ -1.02
RFX3-202ENST00000358730 ADRA1AP35348 466 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 DPP6P42658 865 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 POLD2P49005 469 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 CEACAM7Q14002 265 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 CSHL1Q14406 222 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 NOMO2Q5JPE7 1267 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 RBM20Q5T481 1227 aaKnown RBP8.68□□□□□ -1.02
RFX3-202ENST00000358730 KIAA0930Q6ICG6 404 aaPredicted RBP8.68□□□□□ -1.02
RFX3-202ENST00000358730 TRIM67Q6ZTA4 783 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 ARPINQ7Z6K5 226 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 MFN1Q8IWA4 741 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 C2CD4AQ8NCU7 369 aaPredicted RBP8.68□□□□□ -1.02
RFX3-202ENST00000358730 PDCD6IPQ8WUM4 868 aaKnown RBP8.68□□□□□ -1.02
RFX3-202ENST00000358730 HEXDCQ8WVB3 486 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 STON2Q8WXE9 905 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 FCRL2Q96LA5 508 aaPredicted RBP8.68□□□□□ -1.02
RFX3-202ENST00000358730 TMEM209Q96SK2 561 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 NPAS2Q99743 824 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 MRPL57Q9BQC6 102 aaKnown RBP8.68□□□□□ -1.02
RFX3-202ENST00000358730 ACBD6Q9BR61 282 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 SUDS3Q9H7L9 328 aaPredicted RBP8.68□□□□□ -1.02
RFX3-202ENST00000358730 EFCAB1Q9HAE3 211 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 TREX1Q9NSU2 369 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 FBXO5Q9UKT4 447 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 PATJQ8NI35 1801 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 TRPM7Q96QT4 1865 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 TTC3P53804 2025 aa8.68□□□□□ -1.02
RFX3-202ENST00000358730 TDRD15B5MCY1 1934 aaKnown RBP8.67□□□□□ -1.02
RFX3-202ENST00000358730 TRPC5OSA6NMA1 111 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 TCN1P20061 433 aaPredicted RBP8.67□□□□□ -1.02
RFX3-202ENST00000358730 ME2P23368 584 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 GSTT1P30711 240 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 CHN2P52757 468 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 IRF5Q13568 498 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 ADGRE1Q14246 886 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 GRM2Q14416 872 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 CNPY1Q3B7I2 92 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 BRMS1LQ5PSV4 323 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 BTBD8Q5XKL5 378 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 TIGD7Q6NT04 549 aaPredicted RBP8.67□□□□□ -1.02
RFX3-202ENST00000358730 ZFP1Q6P2D0 407 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 FAM171BQ6P995 826 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms