RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 KCNA10Q16322 511 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 FAM187BQ17R55 369 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 CXorf57Q6NSI4 855 aaKnown RBP17.39■□□□□ 0.37
COL27A1-201ENST00000356083 RAB11FIP2Q7L804 512 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 CXXC5Q7LFL8 322 aaKnown RBP17.39■□□□□ 0.37
COL27A1-201ENST00000356083 ARMC10Q8N2F6 343 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 OSBPL3Q9H4L5 887 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 NMRAL1Q9HBL8 299 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 USP6P35125 1406 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 SLC28A1O00337 649 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 MECP2P51608 486 aaKnown RBP17.39■□□□□ 0.37
COL27A1-201ENST00000356083 ERVK-9P63128 1117 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 AMIGO1Q86WK6 493 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 BRSK1Q8TDC3 778 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 MAGEB18Q96M61 343 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 MLPHQ9BV36 600 aaPredicted RBP17.39■□□□□ 0.37
COL27A1-201ENST00000356083 ERVK-11Q9UQG0 969 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 F8VZ95 297 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 GRTP1Q5TC63 336 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 LRIG3Q6UXM1 1119 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 RTL4Q6ZR62 310 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 EXOC3L1Q86VI1 746 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 KCT2Q8NC54 265 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 NAT9Q9BTE0 207 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 ALG9Q9H6U8 611 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 BATF3Q9NR55 127 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 PTPRTO14522 1441 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 DDNO94850 711 aaPredicted RBP17.39■□□□□ 0.37
COL27A1-201ENST00000356083 NT5EP21589 574 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 NPTX2P47972 431 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 BACE1P56817 501 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 GMFBP60983 142 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 ELAVL2Q12926 359 aaKnown RBP17.39■□□□□ 0.37
COL27A1-201ENST00000356083 INO80DQ53TQ3 878 aaPredicted RBP17.39■□□□□ 0.37
COL27A1-201ENST00000356083 P4HA3Q7Z4N8 544 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 FNDC11Q9BVV2 318 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 MARCH7Q9H992 704 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 JMJD4Q9H9V9 463 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 INMTO95050 263 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 SERPINA1P01009 418 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 NEK3P51956 506 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 SLC12A3P55017 1021 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 KLHDC7AQ5VTJ3 777 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 MAB21L3Q8N8X9 362 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 COX4I2Q96KJ9 171 aa17.39■□□□□ 0.37
COL27A1-201ENST00000356083 SEMA3DO95025 777 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 CXCL14O95715 111 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 PRH1P02810 166 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 SLC35G4P0C7Q5 338 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 MEA1Q16626 185 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 KCTD19Q17RG1 926 aaPredicted RBP17.38■□□□□ 0.37
COL27A1-201ENST00000356083 NBPF12Q5TAG4 269 aaPredicted RBP17.38■□□□□ 0.37
COL27A1-201ENST00000356083 ADHFE1Q8IWW8 467 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 LINC00116Q8NCU8 138 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 CST11Q9H112 138 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 GNPTGQ9UJJ9 305 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 RPH3AQ9Y2J0 694 aaPredicted RBP17.38■□□□□ 0.37
COL27A1-201ENST00000356083 POLR1AO95602 1720 aaPredicted RBP17.38■□□□□ 0.37
COL27A1-201ENST00000356083 DBTP11182 482 aaKnown RBP17.38■□□□□ 0.37
COL27A1-201ENST00000356083 TCF4P15884 667 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 UAP1L1Q3KQV9 507 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 ABRAXAS1Q6UWZ7 409 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 METTL7BQ6UX53 244 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 OR4A15Q8NGL6 344 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 FKBP14Q9NWM8 211 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 A0A087X0B3 334 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 NEDD8-MDP1E9PL57 170 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 HCN1O60741 890 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 CRABP2P29373 138 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 ACER1Q8TDN7 264 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 NDNQ99608 321 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 LDAHQ9H6V9 325 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 CIDEBQ9UHD4 219 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 NLRP1Q9C000 1473 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 SLC33A1O00400 549 aaPredicted RBP17.38■□□□□ 0.37
COL27A1-201ENST00000356083 PGK1P00558 417 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 VEGFAP15692 232 aaPredicted RBP17.38■□□□□ 0.37
COL27A1-201ENST00000356083 SLC30A6Q6NXT4 461 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 ING5Q8WYH8 240 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 TMEM5Q9Y2B1 443 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 QSOX1O00391 747 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 RRM1P23921 792 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 CTSOP43234 321 aaPredicted RBP17.38■□□□□ 0.37
COL27A1-201ENST00000356083 HSF2Q03933 536 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 CCNI2Q6ZMN8 369 aaPredicted RBP17.38■□□□□ 0.37
COL27A1-201ENST00000356083 DENND6BQ8NEG7 585 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 SLC2A14Q8TDB8 520 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 MYLPFQ96A32 169 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 PGRMC2O15173 223 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 TSPAN1O60635 241 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 CATP04040 527 aaKnown RBP17.38■□□□□ 0.37
COL27A1-201ENST00000356083 MB21D2Q8IYB1 491 aaPredicted RBP17.38■□□□□ 0.37
COL27A1-201ENST00000356083 OSBPL2Q9H1P3 480 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 ATP13A3Q9H7F0 1226 aa17.38■□□□□ 0.37
COL27A1-201ENST00000356083 TEX46H3BTG2 121 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 HSD3B1P14060 373 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 OC90Q02509 493 aaPredicted RBP17.37■□□□□ 0.37
COL27A1-201ENST00000356083 TMPRSS9Q7Z410 1059 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 JAZF1Q86VZ6 243 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 ZZZ3Q8IYH5 903 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms