RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 DRD3P35462 400 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 RAD51Q06609 339 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 NIPAL4Q0D2K0 466 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 CNTN1Q12860 1018 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 MAP7D1Q3KQU3 841 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 USP39Q53GS9 565 aaKnown RBP18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 TEX44Q53QW1 395 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 FAM46CQ5VWP2 391 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 GDPD4Q6W3E5 623 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 CDKL3Q8IVW4 592 aaPredicted RBP18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 CAPZA3Q96KX2 299 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 KLHL32Q96NJ5 620 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 NUDCD1Q96RS6 583 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 OMDQ99983 421 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 FAM126AQ9BYI3 521 aaPredicted RBP18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 POLR1EQ9GZS1 481 aaKnown RBP18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 NEUROG2Q9H2A3 272 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 USP29Q9HBJ7 922 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 ATP8A1Q9Y2Q0 1164 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 PCDHGC4Q9Y5F7 938 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 CCDC163A0A0D9SF12 145 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 ESPNB1AK53 854 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 LIASO43766 372 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 TCP1P17987 556 aaKnown RBP18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 BCKDHBP21953 392 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 CASQ1P31415 396 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 HSPA9P38646 679 aaKnown RBP18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 P2RY2P41231 377 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 CSNK1DP48730 415 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 ZBTB16Q05516 673 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 TTC31Q49AM3 519 aaPredicted RBP18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 LRRC73Q5JTD7 316 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 NCEH1Q6PIU2 408 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 ZNF567Q8N184 647 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 FAM71DQ8N9W8 422 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 ZBTB44Q8NCP5 570 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 FAM86C1Q9NVL1 165 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 KLHL8Q9P2G9 620 aaPredicted RBP18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 MBD1Q9UIS9 605 aaPredicted RBP18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 SAR1BQ9Y6B6 198 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 IGHV1OR15-9A0A0B4J2B8 117 aa18.08■□□□□ 0.48
PDLIM7-202ENST00000355841 BCLAF3A2AJT9 711 aaKnown RBP18.08■□□□□ 0.48
PDLIM7-202ENST00000355841 PGRMC1O00264 195 aaKnown RBP18.08■□□□□ 0.48
PDLIM7-202ENST00000355841 ZNF217O75362 1048 aa18.08■□□□□ 0.48
PDLIM7-202ENST00000355841 RPP40O75818 363 aaKnown RBP18.08■□□□□ 0.48
PDLIM7-202ENST00000355841 ACSL1P33121 698 aa18.08■□□□□ 0.48
PDLIM7-202ENST00000355841 CD68P34810 354 aaPredicted RBP18.08■□□□□ 0.48
PDLIM7-202ENST00000355841 GDF10P55107 478 aa18.08■□□□□ 0.48
PDLIM7-202ENST00000355841 BYSLQ13895 437 aaKnown RBP18.08■□□□□ 0.48
PDLIM7-202ENST00000355841 DEFB119Q8N690 84 aa18.08■□□□□ 0.48
PDLIM7-202ENST00000355841 ARRDC2Q8TBH0 407 aa18.08■□□□□ 0.48
PDLIM7-202ENST00000355841 TOE1Q96GM8 510 aaKnown RBP18.08■□□□□ 0.48
PDLIM7-202ENST00000355841 TEKT5Q96M29 485 aa18.08■□□□□ 0.48
PDLIM7-202ENST00000355841 PRRX2Q99811 253 aa18.08■□□□□ 0.48
PDLIM7-202ENST00000355841 CPEB1Q9BZB8 566 aaKnown RBP18.08■□□□□ 0.48
PDLIM7-202ENST00000355841 ATP13A3Q9H7F0 1226 aa18.08■□□□□ 0.48
PDLIM7-202ENST00000355841 CACNA1HO95180 2353 aa18.07■□□□□ 0.48
PDLIM7-202ENST00000355841 FAM47DPA6NHR8 397 aa18.07■□□□□ 0.48
PDLIM7-202ENST00000355841 MTSS1O43312 755 aa18.07■□□□□ 0.48
PDLIM7-202ENST00000355841 C7P10643 843 aa18.07■□□□□ 0.48
PDLIM7-202ENST00000355841 CD86P42081 329 aa18.07■□□□□ 0.48
PDLIM7-202ENST00000355841 AP1S1P61966 158 aa18.07■□□□□ 0.48
PDLIM7-202ENST00000355841 ZNF805Q5CZA5 627 aa18.07■□□□□ 0.48
PDLIM7-202ENST00000355841 PARS2Q7L3T8 475 aaKnown RBP18.07■□□□□ 0.48
PDLIM7-202ENST00000355841 PID1Q7Z2X4 250 aa18.07■□□□□ 0.48
PDLIM7-202ENST00000355841 ZSWIM9Q86XI8 627 aa18.07■□□□□ 0.48
PDLIM7-202ENST00000355841 PRELID2Q8N945 189 aa18.07■□□□□ 0.48
PDLIM7-202ENST00000355841 CCDC110Q8TBZ0 833 aa18.07■□□□□ 0.48
PDLIM7-202ENST00000355841 PDCD6IPQ8WUM4 868 aaKnown RBP18.07■□□□□ 0.48
PDLIM7-202ENST00000355841 SUV39H2Q9H5I1 410 aa18.07■□□□□ 0.48
PDLIM7-202ENST00000355841 DYRK4Q9NR20 520 aa18.07■□□□□ 0.48
PDLIM7-202ENST00000355841 TTC7AQ9ULT0 858 aaPredicted RBP18.07■□□□□ 0.48
PDLIM7-202ENST00000355841 PCDHGA2Q9Y5H1 932 aa18.07■□□□□ 0.48
PDLIM7-202ENST00000355841 EML5Q05BV3 1969 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 C16orf96A6NNT2 1141 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 MMP2P08253 660 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 ITGB7P26010 798 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 KCNJ1P48048 391 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 BCL2L1Q07817 233 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 TRAF2Q12933 501 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 OASLQ15646 514 aaKnown RBP18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 CCNG2Q16589 344 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 AGBL4Q5VU57 503 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 PRUNE1Q86TP1 453 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 SPATA22Q8NHS9 363 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 ACTRT1Q8TDG2 376 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 GAB3Q8WWW8 586 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 LRIG1Q96JA1 1093 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 RBM15Q96T37 977 aaKnown RBP eCLIP18.06■□□□□ 0.482e-7■□□□□ 9.9
PDLIM7-202ENST00000355841 OSBPL1AQ9BXW6 950 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 GLOD4Q9HC38 313 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 UBP1Q9NZI7 540 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 AMACRQ9UHK6 382 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 SCML1Q9UN30 329 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 ZNF148Q9UQR1 794 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 NCKAP1Q9Y2A7 1128 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 MUC6Q6W4X9 2439 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 PRR23AA6NEV1 266 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 CES2O00748 559 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms