RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 THRAP10827 490 aa22.5■■□□□ 1.19
NKX2-1-201ENST00000354822 SERPINB5P36952 375 aa22.5■■□□□ 1.19
NKX2-1-201ENST00000354822 MAGEA11P43364 429 aa22.5■■□□□ 1.19
NKX2-1-201ENST00000354822 GLRBP48167 497 aa22.5■■□□□ 1.19
NKX2-1-201ENST00000354822 ANO7Q6IWH7 933 aa22.5■■□□□ 1.19
NKX2-1-201ENST00000354822 COLGALT2Q8IYK4 626 aa22.5■■□□□ 1.19
NKX2-1-201ENST00000354822 ATP6V0D2Q8N8Y2 350 aa22.5■■□□□ 1.19
NKX2-1-201ENST00000354822 JADE3Q92613 823 aa22.5■■□□□ 1.19
NKX2-1-201ENST00000354822 ELMO2Q96JJ3 720 aa22.5■■□□□ 1.19
NKX2-1-201ENST00000354822 NOL6Q9H6R4 1146 aaKnown RBP22.5■■□□□ 1.19
NKX2-1-201ENST00000354822 PRDM5Q9NQX1 630 aaPredicted RBP22.5■■□□□ 1.19
NKX2-1-201ENST00000354822 PCDHB5Q9Y5E4 795 aa22.5■■□□□ 1.19
NKX2-1-201ENST00000354822 LOC100653049A0A140TA62 436 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 ZBTB14O43829 449 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 KRT34O76011 436 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 PAPSS2O95340 614 aaPredicted RBP22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 PEX11BO96011 259 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 CHRNGP07510 517 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 SERPINH1P50454 418 aaKnown RBP22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 FAM189BP81408 668 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 KLC1Q07866 573 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 RALGPS1Q5JS13 557 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 MARC1Q5VT66 337 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 ZNF470Q6ECI4 717 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 CEP97Q8IW35 865 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 ZNF683Q8IZ20 524 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 KIRREL3Q8IZU9 778 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 NXNL1Q96CM4 212 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 CCDC28BQ9BUN5 200 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 ATP13A1Q9HD20 1204 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 NDE1Q9NXR1 346 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 IL37Q9NZH6 218 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 XPR1Q9UBH6 696 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 CORO1CQ9ULV4 474 aaPredicted RBP22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 SYN3O14994 580 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 DLX3O60479 287 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 NPHS1O60500 1241 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 MPSTP25325 297 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 OR1G1P47890 313 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 SEPT6Q14141 434 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 DDR2Q16832 855 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 SETD3Q86TU7 594 aaPredicted RBP22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 RTN4RL1Q86UN2 441 aaPredicted RBP22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 OR52B2Q96RD2 323 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 OLA1Q9NTK5 396 aaKnown RBP22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 CLIC5Q9NZA1 410 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 CDH22Q9UJ99 828 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 WASF2Q9Y6W5 498 aa22.49■■□□□ 1.19
NKX2-1-201ENST00000354822 RGSL1A5PLK6 1076 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 AOC2O75106 756 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 SMNDC1O75940 238 aaKnown RBP eCLIP22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 ITGAXP20702 1163 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 ACLYP53396 1101 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 DNAJB13P59910 316 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 TNK2Q07912 1038 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 CUL3Q13618 768 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 MAP3K21Q5TCX8 1036 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 IRGCQ6NXR0 463 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 FRMD7Q6ZUT3 714 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 GALNT7Q86SF2 657 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 DEFB107AQ8IZN7 70 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 CPSF7Q8N684 471 aaKnown RBP22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 FAM193BQ96PV7 902 aaPredicted RBP22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 ZNF184Q99676 751 aaPredicted RBP22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 ATXN3LQ9H3M9 355 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 NCKIPSDQ9NZQ3 722 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 SRRDQ9UH36 339 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 SSX2IPQ9Y2D8 614 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 IGLV3-10A0A075B6K4 115 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 TAS2R39P59534 338 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 ILF2Q12905 390 aaKnown RBP22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 MS4A13Q5J8X5 152 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 CLLU1OSQ5K130 101 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 MFSD6LQ8IWD5 586 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 FBXW8Q8N3Y1 598 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 AGR3Q8TD06 166 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 FAM136AQ96C01 138 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 CCDC126Q96EE4 140 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 BTN2A3PQ96KV6 586 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 OSBPL1AQ9BXW6 950 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 S100A14Q9HCY8 104 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 ZDHHC2Q9UIJ5 367 aa22.48■■□□□ 1.19
NKX2-1-201ENST00000354822 NYNRINQ9P2P1 1898 aaKnown RBP22.47■■□□□ 1.19
NKX2-1-201ENST00000354822 GRID2O43424 1007 aa22.47■■□□□ 1.19
NKX2-1-201ENST00000354822 B4GALT3O60512 393 aa22.47■■□□□ 1.19
NKX2-1-201ENST00000354822 TADA2AO75478 443 aa22.47■■□□□ 1.19
NKX2-1-201ENST00000354822 CKBP12277 381 aa22.47■■□□□ 1.19
NKX2-1-201ENST00000354822 CPB1P15086 417 aa22.47■■□□□ 1.19
NKX2-1-201ENST00000354822 LEPRP48357 1165 aaKnown RBP22.47■■□□□ 1.19
NKX2-1-201ENST00000354822 PCSK7Q16549 785 aa22.47■■□□□ 1.19
NKX2-1-201ENST00000354822 FAM83EQ2M2I3 478 aa22.47■■□□□ 1.19
NKX2-1-201ENST00000354822 LSM12Q3MHD2 195 aaKnown RBP22.47■■□□□ 1.19
NKX2-1-201ENST00000354822 TSTD2Q5T7W7 516 aa22.47■■□□□ 1.19
NKX2-1-201ENST00000354822 PIWIL4Q7Z3Z4 852 aaKnown RBP22.47■■□□□ 1.19
NKX2-1-201ENST00000354822 KDELC2Q7Z4H8 507 aa22.47■■□□□ 1.19
NKX2-1-201ENST00000354822 RP9Q8TA86 221 aaKnown RBP22.47■■□□□ 1.19
NKX2-1-201ENST00000354822 MICAL1Q8TDZ2 1067 aa22.47■■□□□ 1.19
NKX2-1-201ENST00000354822 TSPAN17Q96FV3 270 aa22.47■■□□□ 1.19
NKX2-1-201ENST00000354822 HMCESQ96FZ2 354 aa22.47■■□□□ 1.19
NKX2-1-201ENST00000354822 LENG8Q96PV6 779 aaPredicted RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms