RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 PGAP3Q96FM1 320 aaPredicted RBP11.54□□□□□ -0.56
CAPN9-202ENST00000354537 CNDP2Q96KP4 475 aaKnown RBP11.54□□□□□ -0.56
CAPN9-202ENST00000354537 APBA2Q99767 749 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 SLC29A1Q99808 456 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 DUSP16Q9BY84 665 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 YTHDF1Q9BYJ9 559 aaKnown RBP11.54□□□□□ -0.56
CAPN9-202ENST00000354537 HIPK3Q9H422 1215 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 DUS2Q9NX74 493 aaKnown RBP11.54□□□□□ -0.56
CAPN9-202ENST00000354537 UBQLN1Q9UMX0 589 aaKnown RBP11.54□□□□□ -0.56
CAPN9-202ENST00000354537 AAR2Q9Y312 384 aaKnown RBP11.54□□□□□ -0.56
CAPN9-202ENST00000354537 SNX13Q9Y5W8 968 aa11.54□□□□□ -0.56
CAPN9-202ENST00000354537 FBP2O00757 339 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 PHGDHO43175 533 aaKnown RBP11.53□□□□□ -0.56
CAPN9-202ENST00000354537 SRP72O76094 671 aaKnown RBP11.53□□□□□ -0.56
CAPN9-202ENST00000354537 TXNP10599 105 aaKnown RBP11.53□□□□□ -0.56
CAPN9-202ENST00000354537 NFKB1P19838 968 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 NDST2P52849 883 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 POU4F1Q01851 419 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 HMBOX1Q6NT76 420 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 ALKAL1Q6UXT8 129 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 TRIM67Q6ZTA4 783 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 SAMD7Q7Z3H4 446 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 GPR180Q86V85 440 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 PIGZQ86VD9 579 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 DHFR2Q86XF0 187 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 OR2T34Q8NGX1 318 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 OR2T3Q8NH03 318 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 SLC2A14Q8TDB8 520 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 RSPH1Q8WYR4 309 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 DPF3Q92784 378 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 TMIGD2Q96BF3 282 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 VPS50Q96JG6 964 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 PPP1R36Q96LQ0 422 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 ZNF560Q96MR9 790 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 DOK1Q99704 481 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 TRMOQ9BU70 441 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 CD320Q9NPF0 282 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 CCM2LQ9NUG4 571 aaPredicted RBP11.53□□□□□ -0.56
CAPN9-202ENST00000354537 RHBDL2Q9NX52 303 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 CNOT6Q9ULM6 557 aaKnown RBP11.53□□□□□ -0.56
CAPN9-202ENST00000354537 DNAJC25-GNG10A0A024R161 153 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 PRORSD1PA6NEY8 169 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 PPEF2O14830 753 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 NRP2O60462 931 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 PGK1P00558 417 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 GABRB3P28472 473 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 ABCG1P45844 678 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 GMPSP49915 693 aaPredicted RBP11.53□□□□□ -0.56
CAPN9-202ENST00000354537 SCNN1BP51168 640 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 TPI1P60174 286 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 PRKCQQ04759 706 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 TMED1Q13445 227 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 OLIG2Q13516 323 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 LAMC2Q13753 1193 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 PCBP1Q15365 356 aaKnown RBP eCLIP11.53□□□□□ -0.56
CAPN9-202ENST00000354537 DGKDQ16760 1214 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 MTX3Q5HYI7 312 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 FBXO47Q5MNV8 452 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 C6orf10Q5SRN2 563 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 SLC41A1Q8IVJ1 513 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 LZTR1Q8N653 840 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 PCDH20Q8N6Y1 951 aaKnown RBP11.53□□□□□ -0.56
CAPN9-202ENST00000354537 CCNYL1Q8N7R7 359 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 HMGCLL1Q8TB92 370 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 ZSCAN18Q8TBC5 510 aaPredicted RBP11.53□□□□□ -0.56
CAPN9-202ENST00000354537 FAM149B1Q96BN6 582 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 ZMAT2Q96NC0 199 aaKnown RBP11.53□□□□□ -0.56
CAPN9-202ENST00000354537 HOPXQ9BPY8 73 aaPredicted RBP11.53□□□□□ -0.56
CAPN9-202ENST00000354537 PCDHAC1Q9H158 963 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 TRPC7Q9HCX4 862 aa11.53□□□□□ -0.56
CAPN9-202ENST00000354537 MTF2Q9Y483 593 aaPredicted RBP11.53□□□□□ -0.56
CAPN9-202ENST00000354537 FAM95CA0A1B0GW59 222 aa11.52□□□□□ -0.56
CAPN9-202ENST00000354537 TRIM64BA6NI03 449 aa11.52□□□□□ -0.56
CAPN9-202ENST00000354537 MRASO14807 208 aa11.52□□□□□ -0.56
CAPN9-202ENST00000354537 AKAP10O43572 662 aa11.52□□□□□ -0.56
CAPN9-202ENST00000354537 TCN1P20061 433 aaPredicted RBP11.52□□□□□ -0.56
CAPN9-202ENST00000354537 HMOX2P30519 316 aa11.52□□□□□ -0.56
CAPN9-202ENST00000354537 GLRBP48167 497 aa11.52□□□□□ -0.56
CAPN9-202ENST00000354537 MPP1Q00013 466 aa11.52□□□□□ -0.56
CAPN9-202ENST00000354537 PFKPQ01813 784 aa11.52□□□□□ -0.56
CAPN9-202ENST00000354537 ILF2Q12905 390 aaKnown RBP11.52□□□□□ -0.56
CAPN9-202ENST00000354537 SMAD1Q15797 465 aaKnown RBP11.52□□□□□ -0.56
CAPN9-202ENST00000354537 ARL13BQ3SXY8 428 aa11.52□□□□□ -0.56
CAPN9-202ENST00000354537 CNSTQ6PJW8 725 aa11.52□□□□□ -0.56
CAPN9-202ENST00000354537 KIAA0408Q6ZU52 694 aa11.52□□□□□ -0.56
CAPN9-202ENST00000354537 MYO1HQ8N1T3 1032 aa11.52□□□□□ -0.56
CAPN9-202ENST00000354537 PCYOX1LQ8NBM8 494 aa11.52□□□□□ -0.56
CAPN9-202ENST00000354537 FAM156AQ8NDB6 213 aa11.52□□□□□ -0.56
CAPN9-202ENST00000354537 NXNL1Q96CM4 212 aa11.52□□□□□ -0.56
CAPN9-202ENST00000354537 SGF29Q96ES7 293 aa11.52□□□□□ -0.56
CAPN9-202ENST00000354537 SLC45A3Q96JT2 553 aa11.52□□□□□ -0.56
CAPN9-202ENST00000354537 MARK4Q96L34 752 aa11.52□□□□□ -0.56
CAPN9-202ENST00000354537 LPIN3Q9BQK8 851 aa11.52□□□□□ -0.56
CAPN9-202ENST00000354537 SEMA6AQ9H2E6 1030 aa11.52□□□□□ -0.56
CAPN9-202ENST00000354537 NOL11Q9H8H0 719 aaKnown RBP11.52□□□□□ -0.56
CAPN9-202ENST00000354537 PIGVQ9NUD9 493 aa11.52□□□□□ -0.56
CAPN9-202ENST00000354537 FBXW11Q9UKB1 542 aa11.52□□□□□ -0.56
CAPN9-202ENST00000354537 SH3GLB1Q9Y371 365 aa11.52□□□□□ -0.56
CAPN9-202ENST00000354537 XPOTO43592 962 aaKnown RBP11.52□□□□□ -0.57
CAPN9-202ENST00000354537 GPC4O75487 556 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms