RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 RABIFP47224 123 aa16.11■□□□□ 0.17
PDGFA-201ENST00000354513 HNRNPKP61978 463 aaKnown RBP eCLIP16.11■□□□□ 0.17
PDGFA-201ENST00000354513 TLE3Q04726 772 aa16.11■□□□□ 0.17
PDGFA-201ENST00000354513 ZNF805Q5CZA5 627 aa16.11■□□□□ 0.17
PDGFA-201ENST00000354513 RWDD4Q6NW29 188 aaKnown RBP16.11■□□□□ 0.17
PDGFA-201ENST00000354513 GUSBP11Q6P575 273 aa16.11■□□□□ 0.17
PDGFA-201ENST00000354513 SPACA3Q8IXA5 215 aa16.11■□□□□ 0.17
PDGFA-201ENST00000354513 RBFAQ8N0V3 343 aa16.11■□□□□ 0.17
PDGFA-201ENST00000354513 PYROXD2Q8N2H3 581 aa16.11■□□□□ 0.17
PDGFA-201ENST00000354513 IFI44Q8TCB0 444 aa16.11■□□□□ 0.17
PDGFA-201ENST00000354513 FAM172AQ8WUF8 416 aa16.11■□□□□ 0.17
PDGFA-201ENST00000354513 ASB12Q8WXK4 309 aa16.11■□□□□ 0.17
PDGFA-201ENST00000354513 NTAN1Q96AB6 310 aa16.11■□□□□ 0.17
PDGFA-201ENST00000354513 TBC1D31Q96DN5 1066 aa16.11■□□□□ 0.17
PDGFA-201ENST00000354513 HIC2Q96JB3 615 aa16.11■□□□□ 0.17
PDGFA-201ENST00000354513 FEM1CQ96JP0 617 aa16.11■□□□□ 0.17
PDGFA-201ENST00000354513 FCRL3Q96P31 734 aaPredicted RBP16.11■□□□□ 0.17
PDGFA-201ENST00000354513 DACH1Q9UI36 760 aa16.11■□□□□ 0.17
PDGFA-201ENST00000354513 ATXN7O15265 892 aaPredicted RBP16.1■□□□□ 0.17
PDGFA-201ENST00000354513 TSPAN6O43657 245 aa16.1■□□□□ 0.17
PDGFA-201ENST00000354513 CSO75390 466 aaKnown RBP16.1■□□□□ 0.17
PDGFA-201ENST00000354513 MPOP05164 745 aa16.1■□□□□ 0.17
PDGFA-201ENST00000354513 PLEKP08567 350 aaPredicted RBP16.1■□□□□ 0.17
PDGFA-201ENST00000354513 ALPPL2P10696 532 aa16.1■□□□□ 0.17
PDGFA-201ENST00000354513 TGM2P21980 687 aa16.1■□□□□ 0.17
PDGFA-201ENST00000354513 CCDC173Q0VFZ6 552 aa16.1■□□□□ 0.17
PDGFA-201ENST00000354513 PDE1CQ14123 709 aaPredicted RBP16.1■□□□□ 0.17
PDGFA-201ENST00000354513 LRRC69Q6ZNQ3 347 aa16.1■□□□□ 0.17
PDGFA-201ENST00000354513 NYAP1Q6ZVC0 841 aa16.1■□□□□ 0.17
PDGFA-201ENST00000354513 DENND6BQ8NEG7 585 aa16.1■□□□□ 0.17
PDGFA-201ENST00000354513 ENOX1Q8TC92 643 aaKnown RBP16.1■□□□□ 0.17
PDGFA-201ENST00000354513 RAB7BQ96AH8 199 aa16.1■□□□□ 0.17
PDGFA-201ENST00000354513 CENPTQ96BT3 561 aa16.1■□□□□ 0.17
PDGFA-201ENST00000354513 KLHL32Q96NJ5 620 aa16.1■□□□□ 0.17
PDGFA-201ENST00000354513 MAGEH1Q9H213 219 aa16.1■□□□□ 0.17
PDGFA-201ENST00000354513 ASCL3Q9NQ33 180 aa16.1■□□□□ 0.17
PDGFA-201ENST00000354513 FAM207AQ9NSI2 230 aaPredicted RBP16.1■□□□□ 0.17
PDGFA-201ENST00000354513 PMS2P1A4D2B8 440 aa16.09■□□□□ 0.17
PDGFA-201ENST00000354513 KRIT1O00522 736 aa16.09■□□□□ 0.17
PDGFA-201ENST00000354513 FPGTO14772 594 aa16.09■□□□□ 0.17
PDGFA-201ENST00000354513 INSIG1O15503 277 aa16.09■□□□□ 0.17
PDGFA-201ENST00000354513 CCP110O43303 1012 aa16.09■□□□□ 0.17
PDGFA-201ENST00000354513 AQP9O43315 295 aa16.09■□□□□ 0.17
PDGFA-201ENST00000354513 KDELR3O43731 214 aa16.09■□□□□ 0.17
PDGFA-201ENST00000354513 RAMP2O60895 175 aa16.09■□□□□ 0.17
PDGFA-201ENST00000354513 GCATO75600 419 aa16.09■□□□□ 0.17
PDGFA-201ENST00000354513 DXOO77932 396 aaKnown RBP16.09■□□□□ 0.17
PDGFA-201ENST00000354513 TMCC1O94876 653 aa16.09■□□□□ 0.17
PDGFA-201ENST00000354513 ACTN2P35609 894 aa16.09■□□□□ 0.17
PDGFA-201ENST00000354513 ETFBP38117 255 aa16.09■□□□□ 0.17
PDGFA-201ENST00000354513 GABREP78334 506 aa16.09■□□□□ 0.17
PDGFA-201ENST00000354513 CLEC16AQ2KHT3 1053 aa16.09■□□□□ 0.17
PDGFA-201ENST00000354513 DEFB133Q30KQ1 61 aa16.09■□□□□ 0.17
PDGFA-201ENST00000354513 MYLK3Q32MK0 819 aa16.09■□□□□ 0.17
PDGFA-201ENST00000354513 PERM1Q5SV97 790 aa16.09■□□□□ 0.17
PDGFA-201ENST00000354513 ZCCHC8Q6NZY4 707 aaKnown RBP16.09■□□□□ 0.17
PDGFA-201ENST00000354513 WDR59Q6PJI9 974 aa16.09■□□□□ 0.17
PDGFA-201ENST00000354513 MON1BQ7L1V2 547 aa16.09■□□□□ 0.17
PDGFA-201ENST00000354513 ZSCAN30Q86W11 494 aa16.09■□□□□ 0.17
PDGFA-201ENST00000354513 PHF13Q86YI8 300 aaPredicted RBP16.09■□□□□ 0.17
PDGFA-201ENST00000354513 RYBPQ8N488 228 aaPredicted RBP16.09■□□□□ 0.17
PDGFA-201ENST00000354513 TP53I13Q8NBR0 393 aaPredicted RBP16.09■□□□□ 0.17
PDGFA-201ENST00000354513 RETREG1Q9H6L5 497 aa16.09■□□□□ 0.17
PDGFA-201ENST00000354513 USP29Q9HBJ7 922 aa16.09■□□□□ 0.17
PDGFA-201ENST00000354513 MBNL1Q9NR56 388 aaKnown RBP16.09■□□□□ 0.17
PDGFA-201ENST00000354513 LHX3Q9UBR4 397 aa16.09■□□□□ 0.17
PDGFA-201ENST00000354513 CSNK1G3Q9Y6M4 447 aa16.09■□□□□ 0.17
PDGFA-201ENST00000354513 NEMP2A6NFY4 417 aa16.08■□□□□ 0.16
PDGFA-201ENST00000354513 RRP8O43159 456 aaKnown RBP16.08■□□□□ 0.16
PDGFA-201ENST00000354513 USP12O75317 370 aa16.08■□□□□ 0.16
PDGFA-201ENST00000354513 CELA2BP08218 269 aaPredicted RBP16.08■□□□□ 0.16
PDGFA-201ENST00000354513 JUNDP17535 347 aa16.08■□□□□ 0.16
PDGFA-201ENST00000354513 GPD1P21695 349 aa16.08■□□□□ 0.16
PDGFA-201ENST00000354513 POLD3Q15054 466 aaPredicted RBP16.08■□□□□ 0.16
PDGFA-201ENST00000354513 CDKN3Q16667 212 aa16.08■□□□□ 0.16
PDGFA-201ENST00000354513 ARL13BQ3SXY8 428 aa16.08■□□□□ 0.16
PDGFA-201ENST00000354513 CT47A1Q5JQC4 288 aaPredicted RBP16.08■□□□□ 0.16
PDGFA-201ENST00000354513 PPP1R15BQ5SWA1 713 aa16.08■□□□□ 0.16
PDGFA-201ENST00000354513 GDPD4Q6W3E5 623 aa16.08■□□□□ 0.16
PDGFA-201ENST00000354513 TRIM72Q6ZMU5 477 aa16.08■□□□□ 0.16
PDGFA-201ENST00000354513 RBM43Q6ZSC3 357 aaKnown RBP16.08■□□□□ 0.16
PDGFA-201ENST00000354513 EFL1Q7Z2Z2 1120 aaKnown RBP16.08■□□□□ 0.16
PDGFA-201ENST00000354513 RTL3Q8N8U3 475 aaKnown RBP16.08■□□□□ 0.16
PDGFA-201ENST00000354513 HMCESQ96FZ2 354 aa16.08■□□□□ 0.16
PDGFA-201ENST00000354513 PRR11Q96HE9 360 aaPredicted RBP16.08■□□□□ 0.16
PDGFA-201ENST00000354513 DEPDC7Q96QD5 511 aa16.08■□□□□ 0.16
PDGFA-201ENST00000354513 LRRC61Q9BV99 259 aa16.08■□□□□ 0.16
PDGFA-201ENST00000354513 DUSP23Q9BVJ7 150 aa16.08■□□□□ 0.16
PDGFA-201ENST00000354513 BOCQ9BWV1 1114 aa16.08■□□□□ 0.16
PDGFA-201ENST00000354513 CLPBQ9H078 707 aa16.08■□□□□ 0.16
PDGFA-201ENST00000354513 EME2A4GXA9 379 aaPredicted RBP16.07■□□□□ 0.16
PDGFA-201ENST00000354513 H3BM21 787 aa16.07■□□□□ 0.16
PDGFA-201ENST00000354513 MMP20O60882 483 aa16.07■□□□□ 0.16
PDGFA-201ENST00000354513 POP4O95707 220 aaKnown RBP16.07■□□□□ 0.16
PDGFA-201ENST00000354513 KRT3P12035 628 aa16.07■□□□□ 0.16
PDGFA-201ENST00000354513 TIMP2P16035 220 aa16.07■□□□□ 0.16
PDGFA-201ENST00000354513 PDX1P52945 283 aa16.07■□□□□ 0.16
PDGFA-201ENST00000354513 GEMIN4P57678 1058 aaKnown RBP16.07■□□□□ 0.16
PDGFA-201ENST00000354513 SNRPD1P62314 119 aaKnown RBP16.07■□□□□ 0.16
PDGFA-201ENST00000354513 ISXQ2M1V0 245 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms