RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 NCSTNQ92542 709 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 GORASP1Q9BQQ3 440 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 CCDC28BQ9BUN5 200 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 ZNF358Q9NW07 568 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 TMEM216Q9P0N5 145 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 STAP1Q9ULZ2 295 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 OBSL1O75147 1896 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 TNRC18O15417 2968 aaPredicted RBP8.72□□□□□ -1.01
TRIM55-204ENST00000353317 E2F8A0AVK6 867 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 GRXCR1A8MXD5 290 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 IRAK2O43187 625 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 CAPN15O75808 1086 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 ITGA2BP08514 1039 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 UQCRBP14927 111 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 VAV1P15498 845 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 VCLP18206 1134 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 NCF2P19878 526 aaPredicted RBP8.72□□□□□ -1.01
TRIM55-204ENST00000353317 ITGAXP20702 1163 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 DNAJB1P25685 340 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 FPGSQ05932 587 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 DPYSQ14117 519 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 BTBD8Q5XKL5 378 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 HEATR6Q6AI08 1181 aaKnown RBP8.72□□□□□ -1.01
TRIM55-204ENST00000353317 NPWQ8N729 165 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 GDPD5Q8WTR4 605 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 RNF139Q8WU17 664 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 TFB1MQ8WVM0 346 aaKnown RBP8.72□□□□□ -1.01
TRIM55-204ENST00000353317 ATP2A3Q93084 1043 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 TMEM169Q96HH4 297 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 OXCT2Q9BYC2 517 aaPredicted RBP8.72□□□□□ -1.01
TRIM55-204ENST00000353317 KLHL4Q9C0H6 718 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 CCSER2Q9H7U1 834 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 DNAJC28Q9NX36 388 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 DTLQ9NZJ0 730 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 COPG2Q9UBF2 871 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 DCDC2Q9UHG0 476 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 MAGED2Q9UNF1 606 aaPredicted RBP8.72□□□□□ -1.01
TRIM55-204ENST00000353317 BACE2Q9Y5Z0 518 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 BPTFQ12830 3046 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 DENND4CQ5VZ89 1909 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 DCXO43602 365 aa8.71□□□□□ -1.01
TRIM55-204ENST00000353317 BAIAP3O94812 1187 aa8.71□□□□□ -1.01
TRIM55-204ENST00000353317 ETS2P15036 469 aa8.71□□□□□ -1.01
TRIM55-204ENST00000353317 CD1EP15812 388 aa8.71□□□□□ -1.01
TRIM55-204ENST00000353317 ALOX15P16050 662 aaPredicted RBP8.71□□□□□ -1.01
TRIM55-204ENST00000353317 HMGA1P17096 107 aaKnown RBP8.71□□□□□ -1.01
TRIM55-204ENST00000353317 NR2C2P49116 596 aa8.71□□□□□ -1.01
TRIM55-204ENST00000353317 RPS6KA3P51812 740 aa8.71□□□□□ -1.01
TRIM55-204ENST00000353317 SESN2P58004 480 aaPredicted RBP8.71□□□□□ -1.01
TRIM55-204ENST00000353317 ITGA9Q13797 1035 aa8.71□□□□□ -1.01
TRIM55-204ENST00000353317 KIAA1841Q6NSI8 718 aa8.71□□□□□ -1.01
TRIM55-204ENST00000353317 FAM43BQ6ZT52 329 aaPredicted RBP8.71□□□□□ -1.01
TRIM55-204ENST00000353317 DDX53Q86TM3 631 aaKnown RBP8.71□□□□□ -1.01
TRIM55-204ENST00000353317 ARHGAP18Q8N392 663 aa8.71□□□□□ -1.01
TRIM55-204ENST00000353317 KLHL23Q8NBE8 558 aa8.71□□□□□ -1.01
TRIM55-204ENST00000353317 ZNF461Q8TAF7 563 aa8.71□□□□□ -1.01
TRIM55-204ENST00000353317 SPPL2BQ8TCT7 592 aa8.71□□□□□ -1.01
TRIM55-204ENST00000353317 PPP4R1Q8TF05 950 aa8.71□□□□□ -1.01
TRIM55-204ENST00000353317 HTR3CQ8WXA8 447 aa8.71□□□□□ -1.01
TRIM55-204ENST00000353317 CMTM5Q96DZ9 223 aa8.71□□□□□ -1.01
TRIM55-204ENST00000353317 MYEOVQ96EZ4 313 aa8.71□□□□□ -1.01
TRIM55-204ENST00000353317 QKIQ96PU8 341 aaKnown RBP eCLIP8.71□□□□□ -1.01
TRIM55-204ENST00000353317 LGMNQ99538 433 aa8.71□□□□□ -1.01
TRIM55-204ENST00000353317 CENPKQ9BS16 269 aa8.71□□□□□ -1.01
TRIM55-204ENST00000353317 WDCPQ9H6R7 721 aa8.71□□□□□ -1.01
TRIM55-204ENST00000353317 MAN1C1Q9NR34 630 aa8.71□□□□□ -1.01
TRIM55-204ENST00000353317 ABCC13Q9NSE7 274 aa8.71□□□□□ -1.01
TRIM55-204ENST00000353317 NDFIP2Q9NV92 336 aa8.71□□□□□ -1.01
TRIM55-204ENST00000353317 SPG21Q9NZD8 308 aa8.71□□□□□ -1.01
TRIM55-204ENST00000353317 NYNRINQ9P2P1 1898 aaKnown RBP8.71□□□□□ -1.01
TRIM55-204ENST00000353317 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.71□□□□□ -1.02
TRIM55-204ENST00000353317 SLC38A8A6NNN8 435 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 ZNF487B1APH4 448 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 H3BNX3 289 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 H7C4K7 107 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 DCLK1O15075 740 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 TEX28O15482 410 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 ZBTB14O43829 449 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 MFSD11O43934 449 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 OPHN1O60890 802 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 FGF18O76093 207 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 RALBP11234 206 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 PIM1P11309 404 aaPredicted RBP8.71□□□□□ -1.02
TRIM55-204ENST00000353317 GRK2P25098 689 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 MGAT1P26572 445 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 YWHAQP27348 245 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 SERPINB6P35237 376 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 GLUD2P49448 558 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 ERVFC1P60507 584 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 ABCE1P61221 599 aaKnown RBP8.71□□□□□ -1.02
TRIM55-204ENST00000353317 SCAPQ12770 1279 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 TBL3Q12788 808 aaKnown RBP8.71□□□□□ -1.02
TRIM55-204ENST00000353317 USP4Q13107 963 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 GRM2Q14416 872 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 TRIP10Q15642 601 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 FBXL19Q6PCT2 694 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 C14orf80Q86SX3 495 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 MON1AQ86VX9 555 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 ST13P4Q8IZP2 240 aaPredicted RBP8.71□□□□□ -1.02
TRIM55-204ENST00000353317 TNS4Q8IZW8 715 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms