RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 DDIASQ8IXT1 998 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 LSMEM2Q8N112 164 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 CADM2Q8N3J6 435 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 OR6Q1Q8NGQ2 317 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.38□□□□□ -0.27
IFT88-202ENST00000351808 ZNF606Q8WXB4 792 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 ATXN7L3BQ96GX2 97 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 DACH2Q96NX9 599 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 DEPDC7Q96QD5 511 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 KIFC3Q9BVG8 833 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 SPAG4Q9NPE6 437 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 ITM2CQ9NQX7 267 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 AGPAT4Q9NRZ5 378 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 KCNN3Q9UGI6 736 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 ZDHHC2Q9UIJ5 367 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 PMF1-BGLAPU3KQ54 211 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.38□□□□□ -0.27
IFT88-202ENST00000351808 IGKV6D-41A0A0C4DH26 115 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 M0R3G1 203 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 DDX39AO00148 427 aaKnown RBP13.38□□□□□ -0.27
IFT88-202ENST00000351808 DAB1O75553 588 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 RASAL1O95294 804 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 FKBP9O95302 570 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 F7P08709 466 aaPredicted RBP13.38□□□□□ -0.27
IFT88-202ENST00000351808 FASP25445 335 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 ALDH7A1P49419 539 aaKnown RBP13.38□□□□□ -0.27
IFT88-202ENST00000351808 SUZ12Q15022 739 aaKnown RBP13.38□□□□□ -0.27
IFT88-202ENST00000351808 ZIK1Q3SY52 487 aaPredicted RBP13.38□□□□□ -0.27
IFT88-202ENST00000351808 ZNF534Q76KX8 674 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 GLRX5Q86SX6 157 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 LYSMD2Q8IV50 215 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 SPARTQ8N0X7 666 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 DTX3Q8N9I9 347 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 TMEM35BQ8NCS4 154 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 LRRC39Q96DD0 335 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 ZNF577Q9BSK1 485 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 ZNF717Q9BY31 904 aaPredicted RBP13.38□□□□□ -0.27
IFT88-202ENST00000351808 LRRC40Q9H9A6 602 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 SPC25Q9HBM1 224 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 CACNA2D2Q9NY47 1150 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 TSPAN9O75954 239 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 GH2P01242 217 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 HLA-DRAP01903 254 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 CALB1P05937 261 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 RBL1P28749 1068 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 ARCN1P48444 511 aaKnown RBP13.38□□□□□ -0.27
IFT88-202ENST00000351808 CACNB3P54284 484 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 CDK10Q15131 360 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 NOMO1Q15155 1222 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 TAZQ16635 292 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 HIST2H2ACQ16777 129 aaPredicted RBP13.38□□□□□ -0.27
IFT88-202ENST00000351808 GEN1Q17RS7 908 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 ARL13AQ5H913 290 aaPredicted RBP13.38□□□□□ -0.27
IFT88-202ENST00000351808 ADCK1Q86TW2 530 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 SPPL2CQ8IUH8 684 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 HACE1Q8IYU2 909 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 NDNFQ8TB73 568 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 SLC10A4Q96EP9 437 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 ZFYVE19Q96K21 471 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 MFSD14AQ96MC6 490 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 ING2Q9H160 280 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 FBXO8Q9NRD0 319 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 PLSCR3Q9NRY6 295 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 STMN3Q9NZ72 180 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 ZNF221Q9UK13 617 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 RAP2CQ9Y3L5 183 aa13.38□□□□□ -0.27
IFT88-202ENST00000351808 GAKO14976 1311 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 WDR27A2RRH5 827 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 RNF103O00237 685 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 USP12O75317 370 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 FOSP01100 380 aaPredicted RBP13.37□□□□□ -0.27
IFT88-202ENST00000351808 GLULP15104 373 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 ARNTP27540 789 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 ETV3P41162 512 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 GPD2P43304 727 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 HADHQ16836 314 aaKnown RBP13.37□□□□□ -0.27
IFT88-202ENST00000351808 AGMOQ6ZNB7 445 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 USP51Q70EK9 711 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 R3HCC1LQ7Z5L2 792 aaKnown RBP13.37□□□□□ -0.27
IFT88-202ENST00000351808 CCDC28AQ8IWP9 274 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 OR7A2PQ8NGA2 310 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 JOSD2Q8TAC2 188 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 CENPNQ96H22 339 aaPredicted RBP13.37□□□□□ -0.27
IFT88-202ENST00000351808 SNX18Q96RF0 628 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 MXRA8Q9BRK3 442 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 C2orf40Q9H1Z8 148 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 PIH1D1Q9NWS0 290 aaKnown RBP13.37□□□□□ -0.27
IFT88-202ENST00000351808 IL37Q9NZH6 218 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 DSEQ9UL01 958 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 BAG5Q9UL15 447 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 VWA7Q9Y334 891 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 CAB39Q9Y376 341 aaPredicted RBP13.37□□□□□ -0.27
IFT88-202ENST00000351808 DHRS12A0PJE2 317 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 TBX1O43435 398 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 MTRF1O75570 445 aaKnown RBP13.37□□□□□ -0.27
IFT88-202ENST00000351808 AXLP30530 894 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 SHMT2P34897 504 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 RPS9P46781 194 aaKnown RBP13.37□□□□□ -0.27
IFT88-202ENST00000351808 SLC7A2P52569 658 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 PPP5CP53041 499 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms