RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 ECSITQ9BQ95 431 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 SLC25A51Q9H1U9 297 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 NOL6Q9H6R4 1146 aaKnown RBP22.38■■□□□ 1.17
UPF3A-201ENST00000351487 ZDHHC2Q9UIJ5 367 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 FBXO5Q9UKT4 447 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 TLR6Q9Y2C9 796 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 GOLGA8QA0A0J9YX86 632 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 GOLGA8OA6NCC3 632 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 GOLGA8NF8WBI6 632 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 SEPT4O43236 478 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 ZMPSTE24O75844 475 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 MOCS2O96007 188 aaPredicted RBP22.37■■□□□ 1.17
UPF3A-201ENST00000351487 CHRNA4P43681 627 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 KPNA2P52292 529 aaKnown RBP22.37■■□□□ 1.17
UPF3A-201ENST00000351487 TAS2R39P59534 338 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 POU4F1Q01851 419 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 PIK3R6Q5UE93 754 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 UMODL1-AS1Q8N2C9 162 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 SLC39A13Q96H72 371 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 VCXQ9H320 206 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 ATP13A1Q9HD20 1204 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 NPHS1O60500 1241 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 NEBLO76041 1014 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 SORBS2O94875 1100 aaKnown RBP22.37■■□□□ 1.17
UPF3A-201ENST00000351487 ASGR1P07306 291 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 EPHA3P29320 983 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 PPARGP37231 505 aaPredicted RBP22.37■■□□□ 1.17
UPF3A-201ENST00000351487 WNT3AP56704 352 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 CDC16Q13042 620 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 HNRNPDQ14103 355 aaKnown RBP22.37■■□□□ 1.17
UPF3A-201ENST00000351487 SETD3Q86TU7 594 aaPredicted RBP22.37■■□□□ 1.17
UPF3A-201ENST00000351487 HPS6Q86YV9 775 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 PYDC1Q8WXC3 89 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 GATA6Q92908 595 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 CCDC124Q96CT7 223 aaKnown RBP22.37■■□□□ 1.17
UPF3A-201ENST00000351487 ELMO2Q96JJ3 720 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 RANBP9Q96S59 729 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 MRPL57Q9BQC6 102 aaKnown RBP22.37■■□□□ 1.17
UPF3A-201ENST00000351487 RRAGCQ9HB90 399 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 NUDT5Q9UKK9 219 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 PRPF19Q9UMS4 504 aaKnown RBP22.37■■□□□ 1.17
UPF3A-201ENST00000351487 SCML2Q9UQR0 700 aa22.37■■□□□ 1.17
UPF3A-201ENST00000351487 RGSL1A5PLK6 1076 aa22.36■■□□□ 1.17
UPF3A-201ENST00000351487 NEMP1O14524 444 aa22.36■■□□□ 1.17
UPF3A-201ENST00000351487 SERPINB5P36952 375 aa22.36■■□□□ 1.17
UPF3A-201ENST00000351487 CRHR2Q13324 411 aa22.36■■□□□ 1.17
UPF3A-201ENST00000351487 FAM26DQ5JW98 314 aa22.36■■□□□ 1.17
UPF3A-201ENST00000351487 NEPROQ6NW34 567 aa22.36■■□□□ 1.17
UPF3A-201ENST00000351487 RNF111Q6ZNA4 994 aa22.36■■□□□ 1.17
UPF3A-201ENST00000351487 MON1AQ86VX9 555 aa22.36■■□□□ 1.17
UPF3A-201ENST00000351487 ZNF683Q8IZ20 524 aa22.36■■□□□ 1.17
UPF3A-201ENST00000351487 RP9Q8TA86 221 aaKnown RBP22.36■■□□□ 1.17
UPF3A-201ENST00000351487 SLC26A7Q8TE54 656 aa22.36■■□□□ 1.17
UPF3A-201ENST00000351487 NUF2Q9BZD4 464 aa22.36■■□□□ 1.17
UPF3A-201ENST00000351487 ACSS2Q9NR19 701 aa22.36■■□□□ 1.17
UPF3A-201ENST00000351487 CDYLQ9Y232 598 aa22.36■■□□□ 1.17
UPF3A-201ENST00000351487 HEATR9A2RTY3 570 aa22.35■■□□□ 1.17
UPF3A-201ENST00000351487 SKAP2O75563 359 aaPredicted RBP22.35■■□□□ 1.17
UPF3A-201ENST00000351487 OR4Q2P0C623 313 aa22.35■■□□□ 1.17
UPF3A-201ENST00000351487 SLC2A3P11169 496 aa22.35■■□□□ 1.17
UPF3A-201ENST00000351487 NDST2P52849 883 aa22.35■■□□□ 1.17
UPF3A-201ENST00000351487 INHBEP58166 350 aa22.35■■□□□ 1.17
UPF3A-201ENST00000351487 DNAJB13P59910 316 aa22.35■■□□□ 1.17
UPF3A-201ENST00000351487 SLC39A12Q504Y0 691 aa22.35■■□□□ 1.17
UPF3A-201ENST00000351487 IMP4Q96G21 291 aaKnown RBP22.35■■□□□ 1.17
UPF3A-201ENST00000351487 NR1H4Q96RI1 486 aaPredicted RBP22.35■■□□□ 1.17
UPF3A-201ENST00000351487 ZCWPW1Q9H0M4 648 aa22.35■■□□□ 1.17
UPF3A-201ENST00000351487 ATXN3LQ9H3M9 355 aa22.35■■□□□ 1.17
UPF3A-201ENST00000351487 PRDM5Q9NQX1 630 aaPredicted RBP22.35■■□□□ 1.17
UPF3A-201ENST00000351487 CLIC5Q9NZA1 410 aa22.35■■□□□ 1.17
UPF3A-201ENST00000351487 DNAH12Q6ZR08 3092 aa22.35■■□□□ 1.17
UPF3A-201ENST00000351487 CPB1P15086 417 aa22.35■■□□□ 1.17
UPF3A-201ENST00000351487 SP100P23497 879 aaPredicted RBP22.35■■□□□ 1.17
UPF3A-201ENST00000351487 SEPT6Q14141 434 aa22.35■■□□□ 1.17
UPF3A-201ENST00000351487 HERC3Q15034 1050 aa22.35■■□□□ 1.17
UPF3A-201ENST00000351487 PIWIL4Q7Z3Z4 852 aaKnown RBP22.35■■□□□ 1.17
UPF3A-201ENST00000351487 SCN4BQ8IWT1 228 aa22.35■■□□□ 1.17
UPF3A-201ENST00000351487 CALML6Q8TD86 181 aa22.35■■□□□ 1.17
UPF3A-201ENST00000351487 VPS45Q9NRW7 570 aa22.35■■□□□ 1.17
UPF3A-201ENST00000351487 MAGEA13PA6NCF6 341 aa22.34■■□□□ 1.17
UPF3A-201ENST00000351487 OAZ2O95190 189 aa22.34■■□□□ 1.17
UPF3A-201ENST00000351487 RENBPP51606 427 aa22.34■■□□□ 1.17
UPF3A-201ENST00000351487 TRIM71Q2Q1W2 868 aaKnown RBP22.34■■□□□ 1.17
UPF3A-201ENST00000351487 SNX32Q86XE0 403 aa22.34■■□□□ 1.17
UPF3A-201ENST00000351487 KDM1BQ8NB78 822 aa22.34■■□□□ 1.17
UPF3A-201ENST00000351487 FUBP3Q96I24 572 aaKnown RBP eCLIP22.34■■□□□ 1.17
UPF3A-201ENST00000351487 OMDQ99983 421 aa22.34■■□□□ 1.17
UPF3A-201ENST00000351487 ZDHHC7Q9NXF8 308 aa22.34■■□□□ 1.17
UPF3A-201ENST00000351487 ABI2Q9NYB9 513 aaPredicted RBP22.34■■□□□ 1.17
UPF3A-201ENST00000351487 NCKIPSDQ9NZQ3 722 aa22.34■■□□□ 1.17
UPF3A-201ENST00000351487 SCOCQ9UIL1 159 aa22.34■■□□□ 1.17
UPF3A-201ENST00000351487 SQORQ9Y6N5 450 aa22.34■■□□□ 1.17
UPF3A-201ENST00000351487 TMEM189-UBE2V1I3L0A0 370 aa22.34■■□□□ 1.17
UPF3A-201ENST00000351487 B4GALT3O60512 393 aa22.34■■□□□ 1.17
UPF3A-201ENST00000351487 RHOQP17081 205 aa22.34■■□□□ 1.17
UPF3A-201ENST00000351487 TCHHL1Q5QJ38 904 aaPredicted RBP22.34■■□□□ 1.17
UPF3A-201ENST00000351487 C16orf89Q6UX73 402 aa22.34■■□□□ 1.17
UPF3A-201ENST00000351487 GALNT7Q86SF2 657 aa22.34■■□□□ 1.17
UPF3A-201ENST00000351487 TXNDC5Q8NBS9 432 aaKnown RBP22.34■■□□□ 1.17
UPF3A-201ENST00000351487 HEXDCQ8WVB3 486 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms