RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 PPP1R14BQ96C90 147 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 SCHIP1Q9P0W5 487 aaPredicted RBP12.29□□□□□ -0.44
SMAD9-201ENST00000350148 ATP6V1G2O95670 118 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 MSH3P20585 1137 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 CXCR3P49682 368 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 ST13P50502 369 aaKnown RBP12.29□□□□□ -0.44
SMAD9-201ENST00000350148 ADGRD1Q6QNK2 874 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 PRPF18Q99633 342 aaKnown RBP12.29□□□□□ -0.44
SMAD9-201ENST00000350148 C1QTNF7Q9BXJ2 289 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 TMEM120AQ9BXJ8 343 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 HAPLN2Q9GZV7 340 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 PAPOLBQ9NRJ5 636 aaKnown RBP12.29□□□□□ -0.44
SMAD9-201ENST00000350148 PHF24Q9UPV7 400 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 DOCK1Q14185 1865 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 IL10P22301 178 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 CORO1AP31146 461 aaKnown RBP12.28□□□□□ -0.44
SMAD9-201ENST00000350148 MRPS35P82673 323 aaKnown RBP12.28□□□□□ -0.44
SMAD9-201ENST00000350148 TMEM154Q6P9G4 183 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 ASPSCR1Q9BZE9 553 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 ZCWPW1Q9H0M4 648 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 RHOJQ9H4E5 214 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 SYBUQ9NX95 663 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 TAGLN3Q9UI15 199 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 PAPPA2Q9BXP8 1791 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 B2RBV5 119 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 DGKAP23743 735 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 CCND1P24385 295 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 ATP6V0D1P61421 351 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 KDSRQ06136 332 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 MAD2L1Q13257 205 aaPredicted RBP12.28□□□□□ -0.44
SMAD9-201ENST00000350148 PACS1Q6VY07 963 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 EXOC3L1Q86VI1 746 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 BHMTQ93088 406 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 CEP19Q96LK0 163 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 C11orf84Q9BUA3 381 aaPredicted RBP12.28□□□□□ -0.44
SMAD9-201ENST00000350148 GNPTGQ9UJJ9 305 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 INSL6Q9Y581 213 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 TBC1D4O60343 1298 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 NDST3O95803 873 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 PTPN2P17706 415 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 FPGSQ05932 587 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 SKIV2LQ15477 1246 aaKnown RBP12.28□□□□□ -0.44
SMAD9-201ENST00000350148 UNC5AQ6ZN44 842 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 CDC26Q8NHZ8 85 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 ZNF296Q8WUU4 475 aaPredicted RBP12.28□□□□□ -0.44
SMAD9-201ENST00000350148 NR1H4Q96RI1 486 aaPredicted RBP12.28□□□□□ -0.44
SMAD9-201ENST00000350148 ZDHHC18Q9NUE0 388 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 TUBA8Q9NY65 449 aaPredicted RBP12.28□□□□□ -0.44
SMAD9-201ENST00000350148 DTLQ9NZJ0 730 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 ENPP3O14638 875 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 TPP1O14773 563 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 ITGA2BP08514 1039 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 ERVK-10P10266 1014 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 HAPLN1P10915 354 aaPredicted RBP12.28□□□□□ -0.44
SMAD9-201ENST00000350148 SERPINB5P36952 375 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 AP1S1P61966 158 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 CACHD1Q5VU97 1274 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 ANKS6Q68DC2 871 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 AGMOQ6ZNB7 445 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 TEKT5Q96M29 485 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 SLC2A13Q96QE2 648 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 BAIAP3O94812 1187 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 CD48P09326 243 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 PTPN3P26045 913 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 GNA12Q03113 381 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 GRAMD1BQ3KR37 738 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 VPS37AQ8NEZ2 397 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 PAWRQ96IZ0 340 aaKnown RBP12.28□□□□□ -0.44
SMAD9-201ENST00000350148 FCRL5Q96RD9 977 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 MRPL57Q9BQC6 102 aaKnown RBP12.28□□□□□ -0.44
SMAD9-201ENST00000350148 APOL5Q9BWW9 433 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 EFCAB1Q9HAE3 211 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 ABCF3Q9NUQ8 709 aa12.28□□□□□ -0.44
SMAD9-201ENST00000350148 MSI1O43347 362 aaKnown RBP12.27□□□□□ -0.44
SMAD9-201ENST00000350148 ATP5F1P24539 256 aaPredicted RBP12.27□□□□□ -0.44
SMAD9-201ENST00000350148 AQP5P55064 265 aa12.27□□□□□ -0.44
SMAD9-201ENST00000350148 RAB10P61026 200 aa12.27□□□□□ -0.44
SMAD9-201ENST00000350148 RASA2Q15283 850 aa12.27□□□□□ -0.44
SMAD9-201ENST00000350148 STXBP5Q5T5C0 1151 aa12.27□□□□□ -0.44
SMAD9-201ENST00000350148 SWT1Q5T5J6 900 aaKnown RBP12.27□□□□□ -0.44
SMAD9-201ENST00000350148 FBXO39Q8N4B4 442 aa12.27□□□□□ -0.44
SMAD9-201ENST00000350148 OR56A4Q8NGH8 313 aa12.27□□□□□ -0.44
SMAD9-201ENST00000350148 RFWD2Q8NHY2 731 aa12.27□□□□□ -0.44
SMAD9-201ENST00000350148 STAG3L4Q8TBR4 150 aa12.27□□□□□ -0.44
SMAD9-201ENST00000350148 AGR3Q8TD06 166 aa12.27□□□□□ -0.44
SMAD9-201ENST00000350148 CSGALNACT1Q8TDX6 532 aa12.27□□□□□ -0.44
SMAD9-201ENST00000350148 TMEM165Q9HC07 324 aa12.27□□□□□ -0.44
SMAD9-201ENST00000350148 TELO2Q9Y4R8 837 aa12.27□□□□□ -0.44
SMAD9-201ENST00000350148 NRXN2Q9P2S2 1712 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 EEF1B2P24534 225 aaKnown RBP12.27□□□□□ -0.45
SMAD9-201ENST00000350148 TAF5Q15542 800 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 RALGPS1Q5JS13 557 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 RARS2Q5T160 578 aaKnown RBP12.27□□□□□ -0.45
SMAD9-201ENST00000350148 RNF43Q68DV7 783 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 RELL1Q8IUW5 271 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 HS6ST3Q8IZP7 471 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 ZNF567Q8N184 647 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 SMOQ99835 787 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 SYT11Q9BT88 431 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 SLC13A4Q9UKG4 626 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms