RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 MICAL3Q7RTP6 2002 aa16.88■□□□□ 0.29
SAMM50-201ENST00000350028 TRIM13O60858 407 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 LYPLA1O75608 230 aaPredicted RBP16.87■□□□□ 0.29
SAMM50-201ENST00000350028 WFS1O76024 890 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 UPP2O95045 317 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 CRABP2P29373 138 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 GMPRP36959 345 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 CD151P48509 253 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 CTBP1Q13363 440 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 ITGA9Q13797 1035 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 NEPROQ6NW34 567 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 CNKSR3Q6P9H4 555 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 ALYREFQ86V81 257 aaKnown RBP16.87■□□□□ 0.29
SAMM50-201ENST00000350028 LONP2Q86WA8 852 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 DENND6AQ8IWF6 608 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 PGBD5Q8N414 524 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 PLD4Q96BZ4 506 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 ZNF512Q96ME7 567 aaPredicted RBP16.87■□□□□ 0.29
SAMM50-201ENST00000350028 RILPQ96NA2 401 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 C1QTNF1Q9BXJ1 281 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 NMUR2Q9GZQ4 415 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 NACA2Q9H009 215 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 RNF208Q9H0X6 261 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 FBXO5Q9UKT4 447 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 ACOT9Q9Y305 439 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 PCDHB12Q9Y5F1 795 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 LOC285095A0A1B0GVY8 99 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 FAM95CA0A1B0GW59 222 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 ZNF840PA6NDX5 716 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 SERPINA6P08185 405 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 ESRRAP11474 423 aaPredicted RBP16.87■□□□□ 0.29
SAMM50-201ENST00000350028 CCL5P13501 91 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 RPL17P18621 184 aaKnown RBP16.87■□□□□ 0.29
SAMM50-201ENST00000350028 ACVRL1P37023 503 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 SLC1A2P43004 574 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 CDH4P55283 916 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 RAB10P61026 200 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 MPP1Q00013 466 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 MSLNQ13421 630 aaPredicted RBP16.87■□□□□ 0.29
SAMM50-201ENST00000350028 LAMB3Q13751 1172 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 BTG3Q14201 252 aaPredicted RBP16.87■□□□□ 0.29
SAMM50-201ENST00000350028 TBCCQ15814 346 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 RABGAP1LQ5R372 815 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 TPGS2Q68CL5 300 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 SLC41A1Q8IVJ1 513 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 BBS5Q8N3I7 341 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 MYEOVQ96EZ4 313 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 SORT1Q99523 831 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 BTBD10Q9BSF8 475 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 POLR1EQ9GZS1 481 aaKnown RBP16.87■□□□□ 0.29
SAMM50-201ENST00000350028 TASP1Q9H6P5 420 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 DNAJC28Q9NX36 388 aa16.87■□□□□ 0.29
SAMM50-201ENST00000350028 RPL26L1Q9UNX3 145 aaKnown RBP16.87■□□□□ 0.29
SAMM50-201ENST00000350028 ABLIM3O94929 683 aa16.86■□□□□ 0.29
SAMM50-201ENST00000350028 ALOX15P16050 662 aaPredicted RBP16.86■□□□□ 0.29
SAMM50-201ENST00000350028 STMN1P16949 149 aa16.86■□□□□ 0.29
SAMM50-201ENST00000350028 SAT1P21673 171 aa16.86■□□□□ 0.29
SAMM50-201ENST00000350028 ETFBP38117 255 aa16.86■□□□□ 0.29
SAMM50-201ENST00000350028 ILF2Q12905 390 aaKnown RBP16.86■□□□□ 0.29
SAMM50-201ENST00000350028 ZNF235Q14590 738 aa16.86■□□□□ 0.29
SAMM50-201ENST00000350028 FBXO46Q6PJ61 603 aaPredicted RBP16.86■□□□□ 0.29
SAMM50-201ENST00000350028 ZYG11AQ6WRX3 759 aa16.86■□□□□ 0.29
SAMM50-201ENST00000350028 LMNTD2Q8IXW0 634 aa16.86■□□□□ 0.29
SAMM50-201ENST00000350028 TNS4Q8IZW8 715 aa16.86■□□□□ 0.29
SAMM50-201ENST00000350028 ZNF461Q8TAF7 563 aa16.86■□□□□ 0.29
SAMM50-201ENST00000350028 PRR11Q96HE9 360 aaPredicted RBP16.86■□□□□ 0.29
SAMM50-201ENST00000350028 CLSTN3Q9BQT9 956 aa16.86■□□□□ 0.29
SAMM50-201ENST00000350028 VN1R3Q9BXE9 311 aa16.86■□□□□ 0.29
SAMM50-201ENST00000350028 ACE2Q9BYF1 805 aaPredicted RBP16.86■□□□□ 0.29
SAMM50-201ENST00000350028 PDFQ9HBH1 243 aa16.86■□□□□ 0.29
SAMM50-201ENST00000350028 TRPM5Q9NZQ8 1165 aa16.86■□□□□ 0.29
SAMM50-201ENST00000350028 UXTQ9UBK9 157 aaPredicted RBP16.86■□□□□ 0.29
SAMM50-201ENST00000350028 RUVBL2Q9Y230 463 aaKnown RBP16.86■□□□□ 0.29
SAMM50-201ENST00000350028 A0A087X1B8 175 aa16.85■□□□□ 0.29
SAMM50-201ENST00000350028 CAPN14A8MX76 684 aa16.85■□□□□ 0.29
SAMM50-201ENST00000350028 PHGDHO43175 533 aaKnown RBP16.85■□□□□ 0.29
SAMM50-201ENST00000350028 SLC7A4O43246 635 aa16.85■□□□□ 0.29
SAMM50-201ENST00000350028 GJB5O95377 273 aa16.85■□□□□ 0.29
SAMM50-201ENST00000350028 SEC24AO95486 1093 aa16.85■□□□□ 0.29
SAMM50-201ENST00000350028 EPOP01588 193 aa16.85■□□□□ 0.29
SAMM50-201ENST00000350028 SOD2P04179 222 aa16.85■□□□□ 0.29
SAMM50-201ENST00000350028 SLC35E2BP0CK96 405 aa16.85■□□□□ 0.29
SAMM50-201ENST00000350028 HMGA1P17096 107 aaKnown RBP16.85■□□□□ 0.29
SAMM50-201ENST00000350028 SLC6A4P31645 630 aa16.85■□□□□ 0.29
SAMM50-201ENST00000350028 POU4F1Q01851 419 aa16.85■□□□□ 0.29
SAMM50-201ENST00000350028 GNA12Q03113 381 aa16.85■□□□□ 0.29
SAMM50-201ENST00000350028 TLE2Q04725 743 aa16.85■□□□□ 0.29
SAMM50-201ENST00000350028 TSNAXIP1Q2TAA8 658 aa16.85■□□□□ 0.29
SAMM50-201ENST00000350028 SIRPB2Q5JXA9 342 aa16.85■□□□□ 0.29
SAMM50-201ENST00000350028 ZNF470Q6ECI4 717 aa16.85■□□□□ 0.29
SAMM50-201ENST00000350028 GALNT7Q86SF2 657 aa16.85■□□□□ 0.29
SAMM50-201ENST00000350028 TTC7BQ86TV6 843 aa16.85■□□□□ 0.29
SAMM50-201ENST00000350028 ZNF333Q96JL9 665 aa16.85■□□□□ 0.29
SAMM50-201ENST00000350028 FEM1CQ96JP0 617 aa16.85■□□□□ 0.29
SAMM50-201ENST00000350028 MYRFLQ96LU7 910 aa16.85■□□□□ 0.29
SAMM50-201ENST00000350028 SEMA3CQ99985 751 aa16.85■□□□□ 0.29
SAMM50-201ENST00000350028 CD248Q9HCU0 757 aa16.85■□□□□ 0.29
SAMM50-201ENST00000350028 OXSMQ9NWU1 459 aa16.85■□□□□ 0.29
SAMM50-201ENST00000350028 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.85■□□□□ 0.29
SAMM50-201ENST00000350028 MROH6A6NGR9 719 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms