RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 SERPINB9P50453 376 aa18.89■□□□□ 0.61
PTN-201ENST00000348225 SCNN1BP51168 640 aa18.89■□□□□ 0.61
PTN-201ENST00000348225 CDK18Q07002 472 aa18.89■□□□□ 0.61
PTN-201ENST00000348225 RALGPS1Q5JS13 557 aa18.89■□□□□ 0.61
PTN-201ENST00000348225 CES3Q6UWW8 571 aa18.89■□□□□ 0.61
PTN-201ENST00000348225 LINGO4Q6UY18 593 aa18.89■□□□□ 0.61
PTN-201ENST00000348225 TMEM184AQ6ZMB5 413 aa18.89■□□□□ 0.61
PTN-201ENST00000348225 RASSF3Q86WH2 238 aa18.89■□□□□ 0.61
PTN-201ENST00000348225 TMEM25Q86YD3 366 aa18.89■□□□□ 0.61
PTN-201ENST00000348225 APCDD1Q8J025 514 aa18.89■□□□□ 0.61
PTN-201ENST00000348225 FCRL3Q96P31 734 aaPredicted RBP18.89■□□□□ 0.61
PTN-201ENST00000348225 RANBP9Q96S59 729 aa18.89■□□□□ 0.61
PTN-201ENST00000348225 SMC6Q96SB8 1091 aa18.89■□□□□ 0.61
PTN-201ENST00000348225 CHRAC1Q9NRG0 131 aa18.89■□□□□ 0.61
PTN-201ENST00000348225 ZFATQ9P243 1243 aa18.89■□□□□ 0.61
PTN-201ENST00000348225 ZCWPW2A0A1B0GU75 182 aa18.88■□□□□ 0.61
PTN-201ENST00000348225 HEATR9A2RTY3 570 aa18.88■□□□□ 0.61
PTN-201ENST00000348225 NEDD8-MDP1E9PL57 170 aa18.88■□□□□ 0.61
PTN-201ENST00000348225 KRT38O76015 456 aa18.88■□□□□ 0.61
PTN-201ENST00000348225 CD160O95971 181 aa18.88■□□□□ 0.61
PTN-201ENST00000348225 FGF1P05230 155 aa18.88■□□□□ 0.61
PTN-201ENST00000348225 CNTFP26441 200 aa18.88■□□□□ 0.61
PTN-201ENST00000348225 MDH1P40925 334 aaKnown RBP18.88■□□□□ 0.61
PTN-201ENST00000348225 CHRNA4P43681 627 aa18.88■□□□□ 0.61
PTN-201ENST00000348225 RHOAP61586 193 aa18.88■□□□□ 0.61
PTN-201ENST00000348225 NSUN2Q08J23 767 aaKnown RBP eCLIP18.88■□□□□ 0.61
PTN-201ENST00000348225 PLEKHG6Q3KR16 790 aa18.88■□□□□ 0.61
PTN-201ENST00000348225 GPR149Q86SP6 731 aa18.88■□□□□ 0.61
PTN-201ENST00000348225 MTBPQ96DY7 904 aa18.88■□□□□ 0.61
PTN-201ENST00000348225 TRABDQ9H4I3 376 aa18.88■□□□□ 0.61
PTN-201ENST00000348225 NOD2Q9HC29 1040 aa18.88■□□□□ 0.61
PTN-201ENST00000348225 MARK1Q9P0L2 795 aa18.88■□□□□ 0.61
PTN-201ENST00000348225 PRKAG3Q9UGI9 489 aa18.88■□□□□ 0.61
PTN-201ENST00000348225 ARIH1Q9Y4X5 557 aaPredicted RBP18.88■□□□□ 0.61
PTN-201ENST00000348225 SHOX2O60902 331 aaPredicted RBP18.87■□□□□ 0.61
PTN-201ENST00000348225 PAMP19021 973 aa18.87■□□□□ 0.61
PTN-201ENST00000348225 CA4P22748 312 aa18.87■□□□□ 0.61
PTN-201ENST00000348225 CD70P32970 193 aa18.87■□□□□ 0.61
PTN-201ENST00000348225 RGRP47804 291 aa18.87■□□□□ 0.61
PTN-201ENST00000348225 SLC20A2Q08357 652 aa18.87■□□□□ 0.61
PTN-201ENST00000348225 LAMB3Q13751 1172 aa18.87■□□□□ 0.61
PTN-201ENST00000348225 IHHQ14623 411 aa18.87■□□□□ 0.61
PTN-201ENST00000348225 SIRPB2Q5JXA9 342 aa18.87■□□□□ 0.61
PTN-201ENST00000348225 NPAS3Q8IXF0 933 aa18.87■□□□□ 0.61
PTN-201ENST00000348225 EFHBQ8N7U6 833 aa18.87■□□□□ 0.61
PTN-201ENST00000348225 MFSD3Q96ES6 412 aa18.87■□□□□ 0.61
PTN-201ENST00000348225 EXOC2Q96KP1 924 aa18.87■□□□□ 0.61
PTN-201ENST00000348225 KCNK9Q9NPC2 374 aa18.87■□□□□ 0.61
PTN-201ENST00000348225 ABCB8Q9NUT2 735 aa18.87■□□□□ 0.61
PTN-201ENST00000348225 TXNDC16Q9P2K2 825 aa18.87■□□□□ 0.61
PTN-201ENST00000348225 CLEC4EQ9ULY5 219 aa18.87■□□□□ 0.61
PTN-201ENST00000348225 WNT6Q9Y6F9 365 aa18.87■□□□□ 0.61
PTN-201ENST00000348225 GJB3O75712 270 aa18.86■□□□□ 0.61
PTN-201ENST00000348225 NDST3O95803 873 aa18.86■□□□□ 0.61
PTN-201ENST00000348225 MT-ND3P03897 115 aa18.86■□□□□ 0.61
PTN-201ENST00000348225 SNRPAP09012 282 aaKnown RBP18.86■□□□□ 0.61
PTN-201ENST00000348225 ATXN1LP0C7T5 689 aaKnown RBP18.86■□□□□ 0.61
PTN-201ENST00000348225 TYRP14679 529 aa18.86■□□□□ 0.61
PTN-201ENST00000348225 NMBRP28336 390 aa18.86■□□□□ 0.61
PTN-201ENST00000348225 GNGT1P63211 74 aa18.86■□□□□ 0.61
PTN-201ENST00000348225 SEPT6Q14141 434 aa18.86■□□□□ 0.61
PTN-201ENST00000348225 PITRM1Q5JRX3 1037 aa18.86■□□□□ 0.61
PTN-201ENST00000348225 PDPK2PQ6A1A2 396 aa18.86■□□□□ 0.61
PTN-201ENST00000348225 UNC5BQ8IZJ1 945 aa18.86■□□□□ 0.61
PTN-201ENST00000348225 MZB1Q8WU39 189 aa18.86■□□□□ 0.61
PTN-201ENST00000348225 LMLNQ96KR4 655 aa18.86■□□□□ 0.61
PTN-201ENST00000348225 C20orf96Q9NUD7 363 aaPredicted RBP18.86■□□□□ 0.61
PTN-201ENST00000348225 GDE1Q9NZC3 331 aa18.86■□□□□ 0.61
PTN-201ENST00000348225 LHX3Q9UBR4 397 aa18.86■□□□□ 0.61
PTN-201ENST00000348225 SMG5Q9UPR3 1016 aaKnown RBP18.86■□□□□ 0.61
PTN-201ENST00000348225 RANBP2P49792 3224 aaKnown RBP18.86■□□□□ 0.61
PTN-201ENST00000348225 TMEM120BA0PK00 339 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 FOXO6A8MYZ6 492 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 GLP2RO95838 553 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 ERVK-10P10266 1014 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 ALADP13716 330 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 GUCY1A3Q02108 690 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 HYAL1Q12794 435 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 DMC1Q14565 340 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 TCEAL5Q5H9L2 206 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 LY6G5CQ5SRR4 150 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 ANKRD54Q6NXT1 300 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 NLRP9Q7RTR0 991 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 KCNMB4Q86W47 210 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 SMARCD2Q92925 531 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 ALKBH8Q96BT7 664 aaKnown RBP18.85■□□□□ 0.61
PTN-201ENST00000348225 SLC2A11Q9BYW1 496 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 LINC00597Q9H2U6 94 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 SSU72Q9NP77 194 aaKnown RBP18.85■□□□□ 0.61
PTN-201ENST00000348225 DUS2Q9NX74 493 aaKnown RBP18.85■□□□□ 0.61
PTN-201ENST00000348225 NSMCE4AQ9NXX6 385 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 FCF1Q9Y324 198 aaKnown RBP18.85■□□□□ 0.61
PTN-201ENST00000348225 MYLKQ15746 1914 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 CHN1P15882 459 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 CREB1P16220 341 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 HLA-FP30511 346 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 AP1S1P61966 158 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 NCEH1Q6PIU2 408 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 GET4Q7L5D6 327 aaPredicted RBP18.85■□□□□ 0.61
PTN-201ENST00000348225 ADGRG2Q8IZP9 1017 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms