RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 LRRC38Q5VT99 294 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 SYT12Q8IV01 421 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 FAM20CQ8IXL6 584 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 SRFBP1Q8NEF9 429 aaKnown RBP19.53■□□□□ 0.72
HDAC4-201ENST00000345617 CRISPLD1Q9H336 500 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 ERVK-9P63128 1117 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 SPIDRQ14159 915 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 HYIQ5T013 277 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 PQLC1Q8N2U9 271 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 FCGR1BQ92637 280 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 PRDM5Q9NQX1 630 aaPredicted RBP19.53■□□□□ 0.72
HDAC4-201ENST00000345617 PRR12Q9ULL5 1215 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 BTN3A1O00481 513 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 SUV39H1O43463 412 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 ILDR2Q71H61 639 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 ZNF720Q7Z2F6 126 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 CDYL2Q8N8U2 506 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 ITCHQ96J02 903 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 CAB39LQ9H9S4 337 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 RAP2CQ9Y3L5 183 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 PRODHO43272 600 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 RTN3O95197 1032 aaPredicted RBP19.53■□□□□ 0.72
HDAC4-201ENST00000345617 CRATP43155 626 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 LENG9Q96B70 501 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 ZC3H10Q96K80 434 aaKnown RBP19.53■□□□□ 0.72
HDAC4-201ENST00000345617 PLA2G4CQ9UP65 541 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 SLC6A2P23975 617 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 SNAPC2Q13487 334 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 PTAR1Q7Z6K3 402 aaPredicted RBP19.53■□□□□ 0.72
HDAC4-201ENST00000345617 DAW1Q8N136 415 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 TRPV5Q9NQA5 729 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 PSMD13Q9UNM6 376 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 NPHP4O75161 1426 aaPredicted RBP19.53■□□□□ 0.72
HDAC4-201ENST00000345617 A0A0G2JPF8 293 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 HNRNPCL3B7ZW38 293 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 HNRNPCL4P0DMR1 293 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 CCR3P51677 355 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 BTBD9Q96Q07 612 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 NINJ2Q9NZG7 142 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 ZNF214Q9UL59 606 aaPredicted RBP19.53■□□□□ 0.72
HDAC4-201ENST00000345617 EVPLQ92817 2033 aa19.53■□□□□ 0.72
HDAC4-201ENST00000345617 ENTPD3O75355 529 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 S100A2P29034 98 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 LSM12Q3MHD2 195 aaKnown RBP19.52■□□□□ 0.72
HDAC4-201ENST00000345617 PACS1Q6VY07 963 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 MAGEB3O15480 346 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 VAPBO95292 243 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 CAMK1Q14012 370 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 STARD3Q14849 445 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 ZNF772Q68DY9 489 aaPredicted RBP19.52■□□□□ 0.72
HDAC4-201ENST00000345617 TARS2Q9BW92 718 aaKnown RBP19.52■□□□□ 0.72
HDAC4-201ENST00000345617 SYNDIG1Q9H7V2 258 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 SMCO3A2RU48 225 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 FAM25EA8MYX2 175 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 RGS10O43665 173 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 FAM153BP0C7A2 387 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 PHC3Q8NDX5 983 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 ISCA1Q9BUE6 129 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 SPEF2Q9C093 1822 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 RBAK-RBAKDNI3L0D1 243 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 GATBO75879 557 aaKnown RBP19.52■□□□□ 0.72
HDAC4-201ENST00000345617 HMGCRP04035 888 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 BMPR2Q13873 1038 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 OAFQ86UD1 273 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 YME1L1Q96TA2 773 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 NADKO95544 446 aaPredicted RBP19.52■□□□□ 0.72
HDAC4-201ENST00000345617 MTX3Q5HYI7 312 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 IRAK1BP1Q5VVH5 260 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 ADAMTSL2Q86TH1 951 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 EZH1Q92800 747 aaPredicted RBP19.52■□□□□ 0.72
HDAC4-201ENST00000345617 TRIP11Q15643 1979 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 HDAC3O15379 428 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 PEPDP12955 493 aa19.52■□□□□ 0.72
HDAC4-201ENST00000345617 ATP5F1P24539 256 aaPredicted RBP19.52■□□□□ 0.72
HDAC4-201ENST00000345617 A0A0A0MRY4 1105 aa19.52■□□□□ 0.71
HDAC4-201ENST00000345617 PRAMEF22A3QJZ6 481 aa19.52■□□□□ 0.71
HDAC4-201ENST00000345617 GPR182O15218 404 aa19.52■□□□□ 0.71
HDAC4-201ENST00000345617 DBTP11182 482 aaKnown RBP19.52■□□□□ 0.71
HDAC4-201ENST00000345617 EIF4BP23588 611 aaKnown RBP19.52■□□□□ 0.71
HDAC4-201ENST00000345617 PFKFB4Q16877 469 aa19.52■□□□□ 0.71
HDAC4-201ENST00000345617 SLC9A6Q92581 669 aa19.52■□□□□ 0.71
HDAC4-201ENST00000345617 SPATA13Q96N96 652 aa19.52■□□□□ 0.71
HDAC4-201ENST00000345617 PRELID1Q9Y255 219 aa19.52■□□□□ 0.71
HDAC4-201ENST00000345617 TULP3O75386 442 aa19.52■□□□□ 0.71
HDAC4-201ENST00000345617 JCHAINP01591 159 aa19.52■□□□□ 0.71
HDAC4-201ENST00000345617 MMP13P45452 471 aa19.52■□□□□ 0.71
HDAC4-201ENST00000345617 SULT1C3Q6IMI6 304 aa19.52■□□□□ 0.71
HDAC4-201ENST00000345617 CSH1P0DML2 217 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 CSH2P0DML3 217 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 KCNJ2P63252 427 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 FAM189A2Q15884 450 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 DNAJC14Q6Y2X3 702 aaPredicted RBP19.51■□□□□ 0.71
HDAC4-201ENST00000345617 NAT14Q8WUY8 206 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 COLEC11Q9BWP8 271 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 ENTPD5O75356 428 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 RHOCP08134 193 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 RNF19BQ6ZMZ0 732 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 RPS6KA4O75676 772 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 GSTT2BP0CG30 244 aa19.51■□□□□ 0.71
HDAC4-201ENST00000345617 ATF4P18848 351 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms