RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 MID2Q9UJV3 735 aa21.65■■□□□ 1.06
CCDC38-201ENST00000344280 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.65■■□□□ 1.06
CCDC38-201ENST00000344280 NEMP2A6NFY4 417 aa21.64■■□□□ 1.06
CCDC38-201ENST00000344280 J3KR12 359 aa21.64■■□□□ 1.06
CCDC38-201ENST00000344280 BUD23O43709 281 aaKnown RBP21.64■■□□□ 1.06
CCDC38-201ENST00000344280 MRPS35P82673 323 aaKnown RBP21.64■■□□□ 1.06
CCDC38-201ENST00000344280 METTL21CQ5VZV1 264 aa21.64■■□□□ 1.06
CCDC38-201ENST00000344280 IRGCQ6NXR0 463 aa21.64■■□□□ 1.06
CCDC38-201ENST00000344280 MARK4Q96L34 752 aa21.64■■□□□ 1.06
CCDC38-201ENST00000344280 ARHGAP26Q9UNA1 814 aa21.64■■□□□ 1.06
CCDC38-201ENST00000344280 SEPT4O43236 478 aa21.64■■□□□ 1.05
CCDC38-201ENST00000344280 CNTN5O94779 1100 aa21.64■■□□□ 1.05
CCDC38-201ENST00000344280 HAPLN1P10915 354 aaPredicted RBP21.64■■□□□ 1.05
CCDC38-201ENST00000344280 TYMPP19971 482 aa21.64■■□□□ 1.05
CCDC38-201ENST00000344280 PIK3R1P27986 724 aa21.64■■□□□ 1.05
CCDC38-201ENST00000344280 FLT3LGP49771 235 aa21.64■■□□□ 1.05
CCDC38-201ENST00000344280 MFSD14CQ5VZR4 134 aa21.64■■□□□ 1.05
CCDC38-201ENST00000344280 RTN4RL1Q86UN2 441 aaPredicted RBP21.64■■□□□ 1.05
CCDC38-201ENST00000344280 CCNYL1Q8N7R7 359 aa21.64■■□□□ 1.05
CCDC38-201ENST00000344280 HEXDCQ8WVB3 486 aa21.64■■□□□ 1.05
CCDC38-201ENST00000344280 FBXO5Q9UKT4 447 aa21.64■■□□□ 1.05
CCDC38-201ENST00000344280 AIM2O14862 343 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 FKBP6O75344 327 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 NEBLO76041 1014 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 PRDX6P30041 224 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 CCND3P30281 292 aaPredicted RBP21.63■■□□□ 1.05
CCDC38-201ENST00000344280 NSUN2Q08J23 767 aaKnown RBP eCLIP21.63■■□□□ 1.05
CCDC38-201ENST00000344280 PDCD2Q16342 344 aaPredicted RBP21.63■■□□□ 1.05
CCDC38-201ENST00000344280 LRRC36Q1X8D7 754 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 ALFQ53S48 1182 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 TIGD7Q6NT04 549 aaPredicted RBP21.63■■□□□ 1.05
CCDC38-201ENST00000344280 KDELC1Q6UW63 502 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 FBXW8Q8N3Y1 598 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 TTC9BQ8N6N2 239 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 TXNDC5Q8NBS9 432 aaKnown RBP21.63■■□□□ 1.05
CCDC38-201ENST00000344280 HMCESQ96FZ2 354 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 UROC1Q96N76 676 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 ZIC5Q96T25 663 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 RTKNQ9BST9 563 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 NT5MQ9NPB1 228 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 DONSONQ9NYP3 566 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 DNAJB4Q9UDY4 337 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 TBX18O95935 607 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 HTR7P34969 479 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 CD151P48509 253 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 SLC10A7Q0GE19 358 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 PRKAA1Q13131 559 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 FAM219BQ5XKK7 198 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 SNX32Q86XE0 403 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 SERPINB11Q96P15 392 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 MRM3Q9HC36 420 aaKnown RBP21.63■■□□□ 1.05
CCDC38-201ENST00000344280 DLGAP2Q9P1A6 1054 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 ADAMTS6Q9UKP5 1117 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 PCDHB8Q9UN66 801 aa21.63■■□□□ 1.05
CCDC38-201ENST00000344280 CCL22O00626 93 aa21.62■■□□□ 1.05
CCDC38-201ENST00000344280 MAP3K13O43283 966 aa21.62■■□□□ 1.05
CCDC38-201ENST00000344280 COL6A2P12110 1019 aa21.62■■□□□ 1.05
CCDC38-201ENST00000344280 CAP1Q01518 475 aa21.62■■□□□ 1.05
CCDC38-201ENST00000344280 CDC16Q13042 620 aa21.62■■□□□ 1.05
CCDC38-201ENST00000344280 KIAA0930Q6ICG6 404 aaPredicted RBP21.62■■□□□ 1.05
CCDC38-201ENST00000344280 NEPROQ6NW34 567 aa21.62■■□□□ 1.05
CCDC38-201ENST00000344280 SAPCD2Q86UD0 394 aa21.62■■□□□ 1.05
CCDC38-201ENST00000344280 CCDC117Q8IWD4 279 aaPredicted RBP21.62■■□□□ 1.05
CCDC38-201ENST00000344280 ZNF683Q8IZ20 524 aa21.62■■□□□ 1.05
CCDC38-201ENST00000344280 SLC39A13Q96H72 371 aa21.62■■□□□ 1.05
CCDC38-201ENST00000344280 CATSPER2Q96P56 530 aa21.62■■□□□ 1.05
CCDC38-201ENST00000344280 OLFM1Q99784 485 aa21.62■■□□□ 1.05
CCDC38-201ENST00000344280 UBE2OQ9C0C9 1292 aaKnown RBP21.62■■□□□ 1.05
CCDC38-201ENST00000344280 CD86P42081 329 aa21.62■■□□□ 1.05
CCDC38-201ENST00000344280 NUDT2P50583 147 aa21.62■■□□□ 1.05
CCDC38-201ENST00000344280 MTTPP55157 894 aa21.62■■□□□ 1.05
CCDC38-201ENST00000344280 ITKQ08881 620 aa21.62■■□□□ 1.05
CCDC38-201ENST00000344280 EML3Q32P44 896 aa21.62■■□□□ 1.05
CCDC38-201ENST00000344280 RGMBQ6NW40 437 aa21.62■■□□□ 1.05
CCDC38-201ENST00000344280 AAGABQ6PD74 315 aa21.62■■□□□ 1.05
CCDC38-201ENST00000344280 RPS27LQ71UM5 84 aaKnown RBP21.62■■□□□ 1.05
CCDC38-201ENST00000344280 PTCD2Q8WV60 388 aaKnown RBP21.62■■□□□ 1.05
CCDC38-201ENST00000344280 ECSITQ9BQ95 431 aa21.62■■□□□ 1.05
CCDC38-201ENST00000344280 PRG3Q9Y2Y8 225 aaPredicted RBP21.62■■□□□ 1.05
CCDC38-201ENST00000344280 GJB3O75712 270 aa21.61■■□□□ 1.05
CCDC38-201ENST00000344280 DSG1Q02413 1049 aa21.61■■□□□ 1.05
CCDC38-201ENST00000344280 ASPHQ12797 758 aa21.61■■□□□ 1.05
CCDC38-201ENST00000344280 CSHL1Q14406 222 aa21.61■■□□□ 1.05
CCDC38-201ENST00000344280 ZRSR2Q15696 482 aaKnown RBP21.61■■□□□ 1.05
CCDC38-201ENST00000344280 TRIM71Q2Q1W2 868 aaKnown RBP21.61■■□□□ 1.05
CCDC38-201ENST00000344280 MS4A13Q5J8X5 152 aa21.61■■□□□ 1.05
CCDC38-201ENST00000344280 CLLU1OSQ5K130 101 aa21.61■■□□□ 1.05
CCDC38-201ENST00000344280 NXNQ6DKJ4 435 aa21.61■■□□□ 1.05
CCDC38-201ENST00000344280 CCSAPQ6IQ19 270 aaPredicted RBP21.61■■□□□ 1.05
CCDC38-201ENST00000344280 DHDDSQ86SQ9 333 aa21.61■■□□□ 1.05
CCDC38-201ENST00000344280 RNF135Q8IUD6 432 aa21.61■■□□□ 1.05
CCDC38-201ENST00000344280 KDM1BQ8NB78 822 aa21.61■■□□□ 1.05
CCDC38-201ENST00000344280 PABPC5Q96DU9 382 aaKnown RBP21.61■■□□□ 1.05
CCDC38-201ENST00000344280 CNDP1Q96KN2 507 aa21.61■■□□□ 1.05
CCDC38-201ENST00000344280 MRPL46Q9H2W6 279 aaKnown RBP21.61■■□□□ 1.05
CCDC38-201ENST00000344280 SUDS3Q9H7L9 328 aaPredicted RBP21.61■■□□□ 1.05
CCDC38-201ENST00000344280 IGSF5Q9NSI5 407 aa21.61■■□□□ 1.05
CCDC38-201ENST00000344280 GMIPQ9P107 970 aa21.61■■□□□ 1.05
CCDC38-201ENST00000344280 TLR6Q9Y2C9 796 aa21.61■■□□□ 1.05
CCDC38-201ENST00000344280 MTF2Q9Y483 593 aaPredicted RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms