RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 DNAH12Q6ZR08 3092 aa8.25□□□□□ -1.09
HMGCR-202ENST00000343975 TCRBV21S2A2A0A5A6 115 aa8.25□□□□□ -1.09
HMGCR-202ENST00000343975 PABPN1LA6NDY0 278 aaKnown RBP8.25□□□□□ -1.09
HMGCR-202ENST00000343975 MAFKO60675 156 aa8.25□□□□□ -1.09
HMGCR-202ENST00000343975 SOCS5O75159 536 aa8.25□□□□□ -1.09
HMGCR-202ENST00000343975 ZNF217O75362 1048 aa8.25□□□□□ -1.09
HMGCR-202ENST00000343975 SLC8A1P32418 973 aa8.25□□□□□ -1.09
HMGCR-202ENST00000343975 WNT3AP56704 352 aa8.25□□□□□ -1.09
HMGCR-202ENST00000343975 SESN2P58004 480 aaPredicted RBP8.25□□□□□ -1.09
HMGCR-202ENST00000343975 NSUN2Q08J23 767 aaKnown RBP eCLIP8.25□□□□□ -1.09
HMGCR-202ENST00000343975 THOC5Q13769 683 aaKnown RBP8.25□□□□□ -1.09
HMGCR-202ENST00000343975 TAZQ16635 292 aa8.25□□□□□ -1.09
HMGCR-202ENST00000343975 TMEM196Q5HYL7 178 aa8.25□□□□□ -1.09
HMGCR-202ENST00000343975 DCAF12L1Q5VU92 463 aa8.25□□□□□ -1.09
HMGCR-202ENST00000343975 ZNF449Q6P9G9 518 aa8.25□□□□□ -1.09
HMGCR-202ENST00000343975 TRIM67Q6ZTA4 783 aa8.25□□□□□ -1.09
HMGCR-202ENST00000343975 ARHGAP12Q8IWW6 846 aa8.25□□□□□ -1.09
HMGCR-202ENST00000343975 HDDC3Q8N4P3 179 aa8.25□□□□□ -1.09
HMGCR-202ENST00000343975 BLOC1S5Q8TDH9 187 aa8.25□□□□□ -1.09
HMGCR-202ENST00000343975 ERLEC1Q96DZ1 483 aa8.25□□□□□ -1.09
HMGCR-202ENST00000343975 ZNF641Q96N77 438 aaPredicted RBP8.25□□□□□ -1.09
HMGCR-202ENST00000343975 KLHL32Q96NJ5 620 aa8.25□□□□□ -1.09
HMGCR-202ENST00000343975 ERP44Q9BS26 406 aa8.25□□□□□ -1.09
HMGCR-202ENST00000343975 CCDC68Q9H2F9 335 aa8.25□□□□□ -1.09
HMGCR-202ENST00000343975 NDFIP2Q9NV92 336 aa8.25□□□□□ -1.09
HMGCR-202ENST00000343975 MFHAS1Q9Y4C4 1052 aa8.25□□□□□ -1.09
HMGCR-202ENST00000343975 SLC30A1Q9Y6M5 507 aa8.25□□□□□ -1.09
HMGCR-202ENST00000343975 TTC34A8MYJ7 566 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 ATP9BO43861 1147 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 GCATO75600 419 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 NDST3O95803 873 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 DSC2Q02487 901 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 IFFO1Q0D2I5 559 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 POM121L1PQ3SYA9 428 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 ARSIQ5FYB1 569 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 CYP4V2Q6ZWL3 525 aaPredicted RBP8.24□□□□□ -1.09
HMGCR-202ENST00000343975 NLRP9Q7RTR0 991 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 RGL4Q8IZJ4 473 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 ZNF567Q8N184 647 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 STK40Q8N2I9 435 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 SPEM1Q8N4L4 309 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 C12orf50Q8NA57 414 aaPredicted RBP8.24□□□□□ -1.09
HMGCR-202ENST00000343975 OR14C36Q8NHC7 312 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 EDAQ92838 391 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 RAB7BQ96AH8 199 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 FCRL5Q96RD9 977 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 RBM15Q96T37 977 aaKnown RBP eCLIP8.24□□□□□ -1.091e-10■■■■□ 26.6
HMGCR-202ENST00000343975 TBL1YQ9BQ87 522 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 FAM129AQ9BZQ8 928 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 FOXQ1Q9C009 403 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 BTBD1Q9H0C5 482 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 PPANQ9NQ55 473 aaKnown RBP8.24□□□□□ -1.09
HMGCR-202ENST00000343975 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.24□□□□□ -1.09
HMGCR-202ENST00000343975 PCYOX1Q9UHG3 505 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 MMP17Q9ULZ9 603 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 PTPRDP23468 1912 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 TBC1D3DA0A087WVF3 549 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 TBC1D3IA0A087WXS9 549 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 TBC1D3EA0A087X179 549 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 TBC1D3KA0A087X1G2 549 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 TBC1D3FA6NER0 549 aaPredicted RBP8.24□□□□□ -1.09
HMGCR-202ENST00000343975 TMEM221A6NGB7 291 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 TBC1D3LB9A6J9 549 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 M0R296 226 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 TRIM24O15164 1050 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 SIN3BO75182 1162 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 TBC1D3HP0C7X1 549 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 OXTRP30559 389 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 SUOXP51687 545 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 BIRC2Q13490 618 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 PRKD1Q15139 912 aaPredicted RBP8.24□□□□□ -1.09
HMGCR-202ENST00000343975 HIF1AQ16665 826 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 TBC1D3GQ6DHY5 549 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 TBC1D3CQ6IPX1 549 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 DPY19L3Q6ZPD9 716 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 C11orf74Q86VG3 221 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 TBC1D3Q8IZP1 549 aaPredicted RBP8.24□□□□□ -1.09
HMGCR-202ENST00000343975 MMGT1Q8N4V1 131 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 PDCD7Q8N8D1 485 aaKnown RBP8.24□□□□□ -1.09
HMGCR-202ENST00000343975 GSDMBQ8TAX9 411 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 WFDC5Q8TCV5 224 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 NECAB3Q96P71 396 aaPredicted RBP8.24□□□□□ -1.09
HMGCR-202ENST00000343975 NAT9Q9BTE0 207 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 FBXL12Q9NXK8 326 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 DOCK6Q96HP0 2047 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 TCRBV7S2A1N4TA0A589 114 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 GOLGA6L10A6NI86 522 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 MEI4A8MW99 385 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 GREM1O60565 184 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 HLA-DQB2P05538 268 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 C5AR1P21730 350 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 GLDCP23378 1020 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 RPL26P61254 145 aaKnown RBP8.24□□□□□ -1.09
HMGCR-202ENST00000343975 KLF1Q13351 362 aaPredicted RBP8.24□□□□□ -1.09
HMGCR-202ENST00000343975 ELF2Q15723 593 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 SKIDA1Q1XH10 827 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 PRPF39Q86UA1 669 aaKnown RBP8.24□□□□□ -1.09
HMGCR-202ENST00000343975 FAM124AQ86V42 546 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 C12orf40Q86WS4 652 aa8.24□□□□□ -1.09
HMGCR-202ENST00000343975 TRABDQ9H4I3 376 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms