RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 GNA12Q03113 381 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 IHHQ14623 411 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 CNGA3Q16281 694 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 PREPLQ4J6C6 727 aaPredicted RBP18.81■□□□□ 0.6
HOXA9-201ENST00000343483 STXBP5Q5T5C0 1151 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 SPATA31D4Q6ZUB0 917 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 OR7D4Q8NG98 312 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 OR52K2Q8NGK3 314 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 RAB3IL1Q8TBN0 382 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 SKA1Q96BD8 255 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 SPON2Q9BUD6 331 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 UXTQ9UBK9 157 aaPredicted RBP18.81■□□□□ 0.6
HOXA9-201ENST00000343483 INSL5Q9Y5Q6 135 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 SZT2Q5T011 3432 aa18.81■□□□□ 0.6
HOXA9-201ENST00000343483 C2orf71A6NGG8 1288 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 TRAFD1O14545 582 aaPredicted RBP18.8■□□□□ 0.6
HOXA9-201ENST00000343483 HNRNPCL1O60812 293 aaKnown RBP18.8■□□□□ 0.6
HOXA9-201ENST00000343483 DNAJC6O75061 913 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 EFCAB14O75071 495 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 EZRP15311 586 aaKnown RBP18.8■□□□□ 0.6
HOXA9-201ENST00000343483 PAMP19021 973 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 SERPINH1P50454 418 aaKnown RBP18.8■□□□□ 0.6
HOXA9-201ENST00000343483 SGSHP51688 502 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 EPHB3P54753 998 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 CDH4P55283 916 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 DLG2Q15700 870 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 WLSQ5T9L3 541 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 CES4AQ5XG92 561 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 LONP2Q86WA8 852 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 TMEM199Q8N511 208 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 ARRDC2Q8TBH0 407 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 ISL2Q96A47 359 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 SEMA3CQ99985 751 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 TBC1D10AQ9BXI6 508 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 POLR1EQ9GZS1 481 aaKnown RBP18.8■□□□□ 0.6
HOXA9-201ENST00000343483 ARNT2Q9HBZ2 717 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 MRM3Q9HC36 420 aaKnown RBP18.8■□□□□ 0.6
HOXA9-201ENST00000343483 TRPC7Q9HCX4 862 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 FBXO6Q9NRD1 293 aaPredicted RBP18.8■□□□□ 0.6
HOXA9-201ENST00000343483 LNPEPQ9UIQ6 1025 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 AGO1Q9UL18 857 aaKnown RBP18.8■□□□□ 0.6
HOXA9-201ENST00000343483 TEX28O15482 410 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 TSPAN3O60637 253 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 PLIN3O60664 434 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 SAT1P21673 171 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 ARNTP27540 789 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 PTPN4P29074 926 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 ARCN1P48444 511 aaKnown RBP18.8■□□□□ 0.6
HOXA9-201ENST00000343483 OCRLQ01968 901 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 TNK2Q07912 1038 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 FASTKD1Q53R41 847 aaKnown RBP18.8■□□□□ 0.6
HOXA9-201ENST00000343483 ZCCHC23Q6ZST2 131 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 DENND6AQ8IWF6 608 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 TCEAL8Q8IYN2 117 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 ACVR1CQ8NER5 493 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 PPP1R14CQ8TAE6 165 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 MCMBPQ9BTE3 642 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 PRKD2Q9BZL6 878 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 MAGEH1Q9H213 219 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 ATP13A1Q9HD20 1204 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 TREX1Q9NSU2 369 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 SLC39A10Q9ULF5 831 aa18.8■□□□□ 0.6
HOXA9-201ENST00000343483 LTBP2Q14767 1821 aa18.79■□□□□ 0.6
HOXA9-201ENST00000343483 A0A096LPK6 155 aa18.79■□□□□ 0.6
HOXA9-201ENST00000343483 HEATR9A2RTY3 570 aa18.79■□□□□ 0.6
HOXA9-201ENST00000343483 H3BNC9 293 aa18.79■□□□□ 0.6
HOXA9-201ENST00000343483 SCAMP3O14828 347 aaKnown RBP18.79■□□□□ 0.6
HOXA9-201ENST00000343483 MUSKO15146 869 aa18.79■□□□□ 0.6
HOXA9-201ENST00000343483 MAGEA12P43365 314 aa18.79■□□□□ 0.6
HOXA9-201ENST00000343483 CTBP1Q13363 440 aa18.79■□□□□ 0.6
HOXA9-201ENST00000343483 THOC5Q13769 683 aaKnown RBP18.79■□□□□ 0.6
HOXA9-201ENST00000343483 GRM3Q14832 879 aa18.79■□□□□ 0.6
HOXA9-201ENST00000343483 ADGRF1Q5T601 910 aa18.79■□□□□ 0.6
HOXA9-201ENST00000343483 ZC3HC1Q86WB0 502 aaKnown RBP18.79■□□□□ 0.6
HOXA9-201ENST00000343483 WBP2Q969T9 261 aa18.79■□□□□ 0.6
HOXA9-201ENST00000343483 CYP2S1Q96SQ9 504 aa18.79■□□□□ 0.6
HOXA9-201ENST00000343483 TUBB6Q9BUF5 446 aa18.79■□□□□ 0.6
HOXA9-201ENST00000343483 KLF16Q9BXK1 252 aaPredicted RBP18.79■□□□□ 0.6
HOXA9-201ENST00000343483 ZNF395Q9H8N7 513 aaPredicted RBP18.79■□□□□ 0.6
HOXA9-201ENST00000343483 PDFQ9HBH1 243 aa18.79■□□□□ 0.6
HOXA9-201ENST00000343483 ARL8BQ9NVJ2 186 aa18.79■□□□□ 0.6
HOXA9-201ENST00000343483 ZNF358Q9NW07 568 aa18.79■□□□□ 0.6
HOXA9-201ENST00000343483 KCNK4Q9NYG8 393 aa18.79■□□□□ 0.6
HOXA9-201ENST00000343483 TMEM216Q9P0N5 145 aa18.79■□□□□ 0.6
HOXA9-201ENST00000343483 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.79■□□□□ 0.6
HOXA9-201ENST00000343483 L3MBTL1Q9Y468 752 aa18.79■□□□□ 0.6
HOXA9-201ENST00000343483 ACTL7AQ9Y615 435 aa18.79■□□□□ 0.6
HOXA9-201ENST00000343483 BPTFQ12830 3046 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 ZBBXA8MT70 800 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 KIAA0355O15063 1070 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 CLDN11O75508 207 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 MBL2P11226 248 aaPredicted RBP18.78■□□□□ 0.6
HOXA9-201ENST00000343483 CCND1P24385 295 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 HOXD9P28356 352 aaPredicted RBP18.78■□□□□ 0.6
HOXA9-201ENST00000343483 PPM1AP35813 382 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 PPP3CCP48454 512 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 MPP1Q00013 466 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 INSCQ1MX18 579 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 SIRPB2Q5JXA9 342 aa18.78■□□□□ 0.6
HOXA9-201ENST00000343483 TMEM150AQ86TG1 271 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms