RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 CCZ1P86791 482 aaPredicted RBP17.78■□□□□ 0.44
SMAD4-201ENST00000342988 ZNF589Q86UQ0 364 aaPredicted RBP17.78■□□□□ 0.44
SMAD4-201ENST00000342988 PM20D2Q8IYS1 436 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 LGR6Q9HBX8 967 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 DNPEPQ9ULA0 475 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 CCNDBP1O95273 360 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 DGKAP23743 735 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 ARHGAP36Q6ZRI8 547 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 THAP5Q7Z6K1 395 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 ZNF709Q8N972 641 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 NKX2-3Q8TAU0 364 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 OAS3Q9Y6K5 1087 aaKnown RBP17.78■□□□□ 0.44
SMAD4-201ENST00000342988 NPC1L1Q9UHC9 1359 aa17.78■□□□□ 0.44
SMAD4-201ENST00000342988 QRICH2Q9H0J4 1663 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 ERVV-1B6SEH8 477 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 QSOX1O00391 747 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 MID1O15344 667 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 SRGNP10124 158 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 RARGP13631 454 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 ZNF512BQ96KM6 892 aaPredicted RBP17.77■□□□□ 0.44
SMAD4-201ENST00000342988 PIH1D3Q9NQM4 214 aaKnown RBP17.77■□□□□ 0.44
SMAD4-201ENST00000342988 EXD2Q9NVH0 621 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 CACNA1CQ13936 2221 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 SERPINA4P29622 427 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 FAM91A1Q658Y4 838 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 ACSM2BQ68CK6 577 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 FRRS1Q6ZNA5 592 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 SMURF1Q9HCE7 757 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 HCN3Q9P1Z3 774 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 IGSF6O95976 241 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 POLR2EP19388 210 aaKnown RBP17.77■□□□□ 0.44
SMAD4-201ENST00000342988 IL13P35225 146 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 ZNF720Q7Z2F6 126 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 PNLDC1Q8NA58 520 aaKnown RBP17.77■□□□□ 0.44
SMAD4-201ENST00000342988 ZNF518BQ9C0D4 1074 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 OSBPL3Q9H4L5 887 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 MKLN1Q9UL63 735 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 A0A0G2JMP0 313 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 DBIP07108 87 aaKnown RBP17.77■□□□□ 0.44
SMAD4-201ENST00000342988 AFF1P51825 1210 aaKnown RBP17.77■□□□□ 0.44
SMAD4-201ENST00000342988 DEFA5Q01523 94 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 ZZZ3Q8IYH5 903 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 OR4M2Q8NGB6 313 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 VSTM5A8MXK1 200 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 H3BNX3 289 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 PPIBP23284 216 aaKnown RBP17.77■□□□□ 0.44
SMAD4-201ENST00000342988 GNALP38405 381 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 ZC2HC1CQ53FD0 456 aaPredicted RBP17.77■□□□□ 0.44
SMAD4-201ENST00000342988 LRRC34Q8IZ02 419 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 S100PBPQ96BU1 408 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 SQORQ9Y6N5 450 aa17.77■□□□□ 0.44
SMAD4-201ENST00000342988 TOP3BO95985 862 aaKnown RBP17.77■□□□□ 0.43
SMAD4-201ENST00000342988 TMEM253P0C7T8 217 aa17.77■□□□□ 0.43
SMAD4-201ENST00000342988 MAGEA6P43360 314 aa17.77■□□□□ 0.43
SMAD4-201ENST00000342988 C11orf63Q6NUN7 778 aa17.77■□□□□ 0.43
SMAD4-201ENST00000342988 LSM8O95777 96 aaKnown RBP17.77■□□□□ 0.43
SMAD4-201ENST00000342988 LTFP02788 710 aa17.77■□□□□ 0.43
SMAD4-201ENST00000342988 AKT2P31751 481 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 ALG10BQ5I7T1 473 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 ARCQ7LC44 396 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 LHFPL3Q86UP9 236 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 NT5DC3Q86UY8 548 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 ARHGEF40Q8TER5 1519 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 PET100P0DJ07 73 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 ARCN1P48444 511 aaKnown RBP17.76■□□□□ 0.43
SMAD4-201ENST00000342988 MLLT6P55198 1093 aaPredicted RBP17.76■□□□□ 0.43
SMAD4-201ENST00000342988 SREBF2Q12772 1141 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 EMC2Q15006 297 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 ALKBH2Q6NS38 261 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 ADAM32Q8TC27 787 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 MKL1Q969V6 931 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 MASTLQ96GX5 879 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 CCSER2Q9H7U1 834 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 IFT52Q9Y366 437 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 BNIP2Q12982 314 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 SH3RF3Q8TEJ3 882 aaPredicted RBP17.76■□□□□ 0.43
SMAD4-201ENST00000342988 ATXN10Q9UBB4 475 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 BHMG1C9JSJ3 638 aaPredicted RBP17.76■□□□□ 0.43
SMAD4-201ENST00000342988 MSL3P1P0C860 447 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 CDH17Q12864 832 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 C3orf14Q9HBI5 128 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 C15orf41Q9Y2V0 281 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 ALG6Q9Y672 507 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 FSCN1Q16658 493 aaKnown RBP17.76■□□□□ 0.43
SMAD4-201ENST00000342988 SAPCD2Q86UD0 394 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 FAM136AQ96C01 138 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 IDI2Q9BXS1 227 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 SEMA3GQ9NS98 782 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 CCDC88AQ3V6T2 1871 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 SLC30A4O14863 429 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 BEND5Q7L4P6 421 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 TP53INP1Q96A56 240 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 TXN2Q99757 166 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 MRPS33Q9Y291 106 aaKnown RBP17.76■□□□□ 0.43
SMAD4-201ENST00000342988 AK5Q9Y6K8 562 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 AMD1P17707 334 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 SYVN1Q86TM6 617 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 MCFD2Q8NI22 146 aa17.76■□□□□ 0.43
SMAD4-201ENST00000342988 EPS8L3Q8TE67 593 aaKnown RBP17.76■□□□□ 0.43
SMAD4-201ENST00000342988 CHST4Q8NCG5 386 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms