RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 DDX28Q9NUL7 540 aaKnown RBP12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 STK39Q9UEW8 545 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 FETUBQ9UGM5 382 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 LIMD1Q9UGP4 676 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 YJEFN3A6XGL0 299 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 H0Y626 953 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 H3BSA7 217 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 PDLIM1O00151 329 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 TRIM16O95361 564 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 ZNF682O95780 498 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 SLC10A2Q12908 348 aaPredicted RBP12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 ADRM1Q16186 407 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 ZNF280DQ6N043 979 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 SLC26A9Q7LBE3 791 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 CUZD1Q86UP6 607 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 NAT16Q8N8M0 369 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 OR9I1Q8NGQ6 314 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 SPATA17Q96L03 361 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 ROGDIQ9GZN7 287 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 RSL24D1Q9UHA3 163 aaKnown RBP12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 A0A087WXM4 84 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 KANSL1LA0AUZ9 987 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 TTC24A2A3L6 582 aaPredicted RBP12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 MOXD2PA6NHM9 499 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 C16orf96A6NNT2 1141 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 TRMUO75648 421 aaKnown RBP12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 ATP5BP06576 529 aaKnown RBP12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 NUP107P57740 925 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 NRG1Q02297 640 aaPredicted RBP12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 GRIK3Q13003 919 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 NOMO2Q5JPE7 1267 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 IL23RQ5VWK5 629 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 FAM117BQ6P1L5 589 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 HFE2Q6ZVN8 426 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 PLD3Q8IV08 490 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 METTL6Q8TCB7 284 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 SLC16A10Q8TF71 515 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 GFM2Q969S9 779 aaKnown RBP12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 FZD8Q9H461 694 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 CNTNAP1P78357 1384 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 PKD1L3Q7Z443 1732 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 SYNDIG1LA6NDD5 238 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 FAM159BA6NKW6 160 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 CBX4O00257 560 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 LRIG2O94898 1065 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 BCL10O95999 233 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 LTA4HP09960 611 aaKnown RBP12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 ZBTB48P10074 688 aaPredicted RBP12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 PTPN3P26045 913 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 RAB27AP51159 221 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 C21orf59P57076 290 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 IL5RAQ01344 420 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 PCLAFQ15004 111 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 TIGD2Q4W5G0 525 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 GPR158Q5T848 1215 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 C9orf131Q5VYM1 1079 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 OVOS1Q6IE37 1185 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 CBR4Q8N4T8 237 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 ZC3H15Q8WU90 426 aaKnown RBP12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 DLG3Q92796 817 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 B3GALT6Q96L58 329 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 SIRPGQ9P1W8 387 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 ATXN10Q9UBB4 475 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 ZDHHC2Q9UIJ5 367 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 PRPF19Q9UMS4 504 aaKnown RBP12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 TRAF6Q9Y4K3 522 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 U3KQV3 271 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 NRP2O60462 931 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 FBXO21O94952 628 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 XPAP23025 273 aaPredicted RBP12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 OR1E1P30953 314 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 RAP1GDS1P52306 607 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 HUNKP57058 714 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 NCBP2-AS2Q69YL0 99 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 PAOXQ6QHF9 649 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 PKP2Q99959 881 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 COLEC11Q9BWP8 271 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 TRIM8Q9BZR9 551 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 STN1Q9H668 368 aaKnown RBP12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 SPON1Q9HCB6 807 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 PREBQ9HCU5 417 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 EXOSC4Q9NPD3 245 aaKnown RBP12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 PRDM5Q9NQX1 630 aaPredicted RBP12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 RIC8BQ9NVN3 520 aa12.54□□□□□ -0.4
SNRNP48-201ENST00000342415 CCDC88AQ3V6T2 1871 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 CLIC3O95833 236 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 SLC2A4P14672 509 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 CES1P23141 567 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 BRCC3P46736 316 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 WNT3AP56704 352 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 RAD51Q06609 339 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 VAC14Q08AM6 782 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 DMC1Q14565 340 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 CAMK1DQ8IU85 385 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 CDYL2Q8N8U2 506 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 KLHL25Q9H0H3 589 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 A0A088AWK7 358 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 DHRS12A0PJE2 317 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 C17orf102A2RUQ5 167 aa12.53□□□□□ -0.4
SNRNP48-201ENST00000342415 CCDC154A6NI56 674 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms